| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is phnJ [H]
Identifier: 13472903
GI number: 13472903
Start: 2691699
End: 2692598
Strand: Direct
Name: phnJ [H]
Synonym: mlr3346
Alternate gene names: 13472903
Gene position: 2691699-2692598 (Clockwise)
Preceding gene: 13472902
Following gene: 13472904
Centisome position: 38.26
GC content: 62.67
Gene sequence:
>900_bases ATGACCGACATCGCCACCTACAACTTCGCCTATCTCGACGAGCAGACCAAAAGGATGATCCGCCGGGCGATCCTCAAGGG CATCGCCATTCCTGGATACCAGGTGCCGTTCGCCTCGCGCGAAATGCCGATGCCCTATGGCTGGGGCACTGGCGGCGTCC AGGTCACAGCCTCGATCATCGGTCCCGACGATGTGCTGAAGGTCATCGACCAGGGCGCCGACGACACCACCAACGCGGTA TCGATCCGCGCCTTCTTCAAGAAGGTCGCCAATGTCGCTGTCACCACCAATACCGCCAGCGCCACCATCATCCAGACCCG CCACCGCATCCCCGAACATCCGCTGACCGCGGGCCAGGTGCTGGTCTACCAGGTGCCGATCCCCGAGCCGCTGCGCTTCC TCGAACCACGCGAGACCGAGACGCGCAAGATGCATGCGCTTGAGGAGTATGGCCTCATGCATGTGAAGCTCTATGAGGAC ATCGCCAAGCACGGCCGCATCGCCACCACCTATGCCTATCCGGTCAAGGTCGAGGGCCGCTATGTGATGGACCCCTCGCC GACGCCGAAATTCGACAATCCCAAGATGCACCGCTCGCCGGCGCTGCAGCTGTTCGGCGCCGGCCGCGAAAAGCGCATCT ACGCGGTGCCGCCCTTCACCGATGTCGTCAGCCTCGATTTCGAGGATCATCCGTTCGAGGTGCAGACCTTCGACCAGCCC TGCGCGCTGTGCGCGGCCGAGAATGTCTATCTCGACGAGGTCATCCTCGACGACCATGGCGGCCACATGTTCGTCTGTTC CGACACCGACCATTGCGAGAAGCGGCGCGAAGAGGGCCATCGCGGCCATCTTGCCCCGGAAACCCACCTTGGCTCCGAAA AAATGGAGCCGGCACAATGA
Upstream 100 bases:
>100_bases ACAATTCCGAGATGCATCCATCCGGTCGAGTTCATCTGAATTCGCCCCTGTTTCCGCGTCCTGGACGCCAATTCGATACC ACAATGTGGATGTGATCGCC
Downstream 100 bases:
>100_bases CCGACGAACCGCTGTTGCGCGTCTCGGCGCTCTCCAAATTCTACGGTTCGCGCGTCGGCTGCGACAACGTCTCCTTCGAC CTGTGGCCGGGCGAAGTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MTDIATYNFAYLDEQTKRMIRRAILKGIAIPGYQVPFASREMPMPYGWGTGGVQVTASIIGPDDVLKVIDQGADDTTNAV SIRAFFKKVANVAVTTNTASATIIQTRHRIPEHPLTAGQVLVYQVPIPEPLRFLEPRETETRKMHALEEYGLMHVKLYED IAKHGRIATTYAYPVKVEGRYVMDPSPTPKFDNPKMHRSPALQLFGAGREKRIYAVPPFTDVVSLDFEDHPFEVQTFDQP CALCAAENVYLDEVILDDHGGHMFVCSDTDHCEKRREEGHRGHLAPETHLGSEKMEPAQ
Sequences:
>Translated_299_residues MTDIATYNFAYLDEQTKRMIRRAILKGIAIPGYQVPFASREMPMPYGWGTGGVQVTASIIGPDDVLKVIDQGADDTTNAV SIRAFFKKVANVAVTTNTASATIIQTRHRIPEHPLTAGQVLVYQVPIPEPLRFLEPRETETRKMHALEEYGLMHVKLYED IAKHGRIATTYAYPVKVEGRYVMDPSPTPKFDNPKMHRSPALQLFGAGREKRIYAVPPFTDVVSLDFEDHPFEVQTFDQP CALCAAENVYLDEVILDDHGGHMFVCSDTDHCEKRREEGHRGHLAPETHLGSEKMEPAQ >Mature_298_residues TDIATYNFAYLDEQTKRMIRRAILKGIAIPGYQVPFASREMPMPYGWGTGGVQVTASIIGPDDVLKVIDQGADDTTNAVS IRAFFKKVANVAVTTNTASATIIQTRHRIPEHPLTAGQVLVYQVPIPEPLRFLEPRETETRKMHALEEYGLMHVKLYEDI AKHGRIATTYAYPVKVEGRYVMDPSPTPKFDNPKMHRSPALQLFGAGREKRIYAVPPFTDVVSLDFEDHPFEVQTFDQPC ALCAAENVYLDEVILDDHGGHMFVCSDTDHCEKRREEGHRGHLAPETHLGSEKMEPAQ
Specific function: Belongs to an operon involved in utilization of glyphosate and other phosphonates [H]
COG id: COG3627
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnJ family [H]
Homologues:
Organism=Escherichia coli, GI1790536, Length=277, Percent_Identity=76.1732851985559, Blast_Score=456, Evalue=1e-130,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010306 [H]
Pfam domain/function: PF06007 PhnJ [H]
EC number: NA
Molecular weight: Translated: 33578; Mature: 33446
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIATYNFAYLDEQTKRMIRRAILKGIAIPGYQVPFASREMPMPYGWGTGGVQVTASII CCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE GPDDVLKVIDQGADDTTNAVSIRAFFKKVANVAVTTNTASATIIQTRHRIPEHPLTAGQV CHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEECCCCEEEEEHHHCCCCCCCCCCCE LVYQVPIPEPLRFLEPRETETRKMHALEEYGLMHVKLYEDIAKHGRIATTYAYPVKVEGR EEEECCCCCHHHHCCCCCHHHHHHHHHHHHCCEEEHHHHHHHHCCCEEEEEEEEEEECCE YVMDPSPTPKFDNPKMHRSPALQLFGAGREKRIYAVPPFTDVVSLDFEDHPFEVQTFDQP EEECCCCCCCCCCCCCCCCCCHHEECCCCCCEEEECCCCCCEEEECCCCCCEEEEECCCC CALCAAENVYLDEVILDDHGGHMFVCSDTDHCEKRREEGHRGHLAPETHLGSEKMEPAQ HHHHHHCCEEEEEEEEECCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TDIATYNFAYLDEQTKRMIRRAILKGIAIPGYQVPFASREMPMPYGWGTGGVQVTASII CCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE GPDDVLKVIDQGADDTTNAVSIRAFFKKVANVAVTTNTASATIIQTRHRIPEHPLTAGQV CHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEECCCCEEEEEHHHCCCCCCCCCCCE LVYQVPIPEPLRFLEPRETETRKMHALEEYGLMHVKLYEDIAKHGRIATTYAYPVKVEGR EEEECCCCCHHHHCCCCCHHHHHHHHHHHHCCEEEHHHHHHHHCCCEEEEEEEEEEECCE YVMDPSPTPKFDNPKMHRSPALQLFGAGREKRIYAVPPFTDVVSLDFEDHPFEVQTFDQP EEECCCCCCCCCCCCCCCCCCHHEECCCCCCEEEECCCCCCEEEECCCCCCEEEEECCCC CALCAAENVYLDEVILDDHGGHMFVCSDTDHCEKRREEGHRGHLAPETHLGSEKMEPAQ HHHHHHCCEEEEEEEEECCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481431 [H]