BacMap

Definition	Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession	NC_002678
Length	7,036,071

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The map label for this gene is phnK [H]

Identifier: 13472904

GI number: 13472904

Start: 2692595

End: 2693371

Strand: Direct

Name: phnK [H]

Synonym: mlr3347

Alternate gene names: 13472904

Gene position: 2692595-2693371 (Clockwise)

Preceding gene: 13472903

Following gene: 13472905

Centisome position: 38.27

GC content: 66.92

Gene sequence:

>777_bases
ATGACCGACGAACCGCTGTTGCGCGTCTCGGCGCTCTCCAAATTCTACGGTTCGCGCGTCGGCTGCGACAACGTCTCCTT
CGACCTGTGGCCGGGCGAAGTCCTGGCTGTCGTTGGCGAATCCGGTTCCGGCAAGACGACGCTGCTCAACTGCCTGTCGA
CGCGGCTCTTGCCCTCCTCCGGCACCGCCGGCTACCGCATGCGCGACGGCCAGTTCCGCGAGCTGTACCGCATGAGCGAG
GCCGAGCGCCGCTTCCTGATGCGGACCGACTGGGGCTTTGTCCACCAGAACCCTGCCGATGGCTTGCGCATGACGGTGTC
GGCCGGCGCCAATGTCGGCGAGCGGCTGATGGCGGTCGGCGACCGCCACTACGGCAAGATCCGCGCCACGGCCGTCGACT
GGCTGTCGCGCGTCGAGATCGAGCAAGACCGTATCGACGACGAGCCACGTGCCTTTTCCGGTGGCATGCGCCAGCGCCTG
CAGATCGCCCGCAACCTCGTCACCGGCCCACGGCTGGTGTTCATGGACGAGCCGACCGGCGGCCTCGACGTCTCGGTGCA
GGCACGCCTGCTCGACCTGCTGCGTGGACTGGTCACCGATCTCGGTCTCGCGGCCATCGTCGTCACTCATGATCTCGCCG
TGGCGCGCCTGCTGTCGCAGCGCATGATGGTGATGAAGGACGGCCGCGTCGTCGAAAGCGGCCTCACCGACCGCGTGCTC
GACGACCCGCGCGCGCCCTATACGCAGCTTCTCGTTTCTTCCATTTTGCAGGTGTAA

Upstream 100 bases:

>100_bases
GTTCCGACACCGACCATTGCGAGAAGCGGCGCGAAGAGGGCCATCGCGGCCATCTTGCCCCGGAAACCCACCTTGGCTCC
GAAAAAATGGAGCCGGCACA

Downstream 100 bases:

>100_bases
CGATGCCAACCCCGCTCGTTGTTTCCGACGTCGCCAAGAGCTTCACCATGCATCTGCGCGATGGCATCAAACTGCCTGTC
GTCGCCGCTGTCTCGTTCTC

Product: phosphonate C-P lyase system protein PhnK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MTDEPLLRVSALSKFYGSRVGCDNVSFDLWPGEVLAVVGESGSGKTTLLNCLSTRLLPSSGTAGYRMRDGQFRELYRMSE
AERRFLMRTDWGFVHQNPADGLRMTVSAGANVGERLMAVGDRHYGKIRATAVDWLSRVEIEQDRIDDEPRAFSGGMRQRL
QIARNLVTGPRLVFMDEPTGGLDVSVQARLLDLLRGLVTDLGLAAIVVTHDLAVARLLSQRMMVMKDGRVVESGLTDRVL
DDPRAPYTQLLVSSILQV

Sequences:

>Translated_258_residues
MTDEPLLRVSALSKFYGSRVGCDNVSFDLWPGEVLAVVGESGSGKTTLLNCLSTRLLPSSGTAGYRMRDGQFRELYRMSE
AERRFLMRTDWGFVHQNPADGLRMTVSAGANVGERLMAVGDRHYGKIRATAVDWLSRVEIEQDRIDDEPRAFSGGMRQRL
QIARNLVTGPRLVFMDEPTGGLDVSVQARLLDLLRGLVTDLGLAAIVVTHDLAVARLLSQRMMVMKDGRVVESGLTDRVL
DDPRAPYTQLLVSSILQV
>Mature_257_residues
TDEPLLRVSALSKFYGSRVGCDNVSFDLWPGEVLAVVGESGSGKTTLLNCLSTRLLPSSGTAGYRMRDGQFRELYRMSEA
ERRFLMRTDWGFVHQNPADGLRMTVSAGANVGERLMAVGDRHYGKIRATAVDWLSRVEIEQDRIDDEPRAFSGGMRQRLQ
IARNLVTGPRLVFMDEPTGGLDVSVQARLLDLLRGLVTDLGLAAIVVTHDLAVARLLSQRMMVMKDGRVVESGLTDRVLD
DPRAPYTQLLVSSILQV

Specific function: Part of the binding-protein-dependent transport system for alkylphosphonates. Probably responsible for energy coupling to the transport system [H]

COG id: COG4107

COG function: function code P; ABC-type phosphonate transport system, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI21536376, Length=238, Percent_Identity=26.0504201680672, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI45446740, Length=244, Percent_Identity=26.2295081967213, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI47078218, Length=244, Percent_Identity=26.2295081967213, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI46592971, Length=205, Percent_Identity=31.7073170731707, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI46592978, Length=205, Percent_Identity=31.7073170731707, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI27477115, Length=235, Percent_Identity=26.3829787234043, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI46592956, Length=205, Percent_Identity=31.7073170731707, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI46592915, Length=205, Percent_Identity=31.7073170731707, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI46592898, Length=205, Percent_Identity=31.7073170731707, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI46592964, Length=205, Percent_Identity=31.7073170731707, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI156105685, Length=232, Percent_Identity=30.1724137931034, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI171184400, Length=240, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI9961250, Length=235, Percent_Identity=28.0851063829787, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI9955963, Length=226, Percent_Identity=29.646017699115, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI42741659, Length=215, Percent_Identity=28.8372093023256, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI48994997, Length=255, Percent_Identity=69.0196078431373, Blast_Score=352, Evalue=1e-98,
Organism=Escherichia coli, GI1789962, Length=261, Percent_Identity=36.7816091954023, Blast_Score=154, Evalue=5e-39,
Organism=Escherichia coli, GI145693107, Length=264, Percent_Identity=37.1212121212121, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1789963, Length=257, Percent_Identity=34.2412451361868, Blast_Score=136, Evalue=1e-33,
Organism=Escherichia coli, GI1788506, Length=245, Percent_Identity=37.9591836734694, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1787500, Length=234, Percent_Identity=34.6153846153846, Blast_Score=130, Evalue=7e-32,
Organism=Escherichia coli, GI1787758, Length=224, Percent_Identity=37.0535714285714, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI48994883, Length=255, Percent_Identity=34.5098039215686, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1787759, Length=260, Percent_Identity=34.6153846153846, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI87081834, Length=208, Percent_Identity=38.9423076923077, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1788225, Length=248, Percent_Identity=32.6612903225806, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI1786398, Length=257, Percent_Identity=28.4046692607004, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI87081791, Length=259, Percent_Identity=29.3436293436293, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1789891, Length=237, Percent_Identity=30.379746835443, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1789672, Length=255, Percent_Identity=28.6274509803922, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1788761, Length=238, Percent_Identity=29.4117647058824, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1789032, Length=249, Percent_Identity=29.3172690763052, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1787029, Length=253, Percent_Identity=25.6916996047431, Blast_Score=98, Evalue=7e-22,
Organism=Escherichia coli, GI1787089, Length=228, Percent_Identity=30.2631578947368, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787547, Length=261, Percent_Identity=29.1187739463602, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1787370, Length=260, Percent_Identity=27.3076923076923, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1788644, Length=262, Percent_Identity=30.1526717557252, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI1789890, Length=240, Percent_Identity=32.5, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI87081709, Length=236, Percent_Identity=28.8135593220339, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787548, Length=240, Percent_Identity=28.3333333333333, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1787105, Length=210, Percent_Identity=35.2380952380952, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1787712, Length=243, Percent_Identity=29.6296296296296, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1790525, Length=242, Percent_Identity=26.8595041322314, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1787164, Length=242, Percent_Identity=31.404958677686, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1790162, Length=249, Percent_Identity=27.3092369477912, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1789873, Length=232, Percent_Identity=30.1724137931034, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1786563, Length=236, Percent_Identity=29.2372881355932, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1790467, Length=231, Percent_Identity=28.5714285714286, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1789991, Length=227, Percent_Identity=27.7533039647577, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1786872, Length=252, Percent_Identity=29.7619047619048, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1786803, Length=238, Percent_Identity=27.7310924369748, Blast_Score=81, Evalue=9e-17,
Organism=Escherichia coli, GI1786703, Length=184, Percent_Identity=36.9565217391304, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1788450, Length=233, Percent_Identity=26.6094420600858, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1787792, Length=225, Percent_Identity=30.2222222222222, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1786253, Length=214, Percent_Identity=30.3738317757009, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI48995001, Length=228, Percent_Identity=28.5087719298246, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI1786319, Length=236, Percent_Identity=26.6949152542373, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1790190, Length=223, Percent_Identity=26.9058295964126, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI87082267, Length=249, Percent_Identity=27.3092369477912, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1790544, Length=261, Percent_Identity=25.2873563218391, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1788210, Length=236, Percent_Identity=25.4237288135593, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1788472, Length=250, Percent_Identity=25.6, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1790534, Length=205, Percent_Identity=29.7560975609756, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1786345, Length=224, Percent_Identity=29.0178571428571, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI87082268, Length=249, Percent_Identity=26.5060240963855, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789593, Length=243, Percent_Identity=26.7489711934156, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1789586, Length=246, Percent_Identity=26.4227642276423, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI115533608, Length=240, Percent_Identity=27.5, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17552010, Length=219, Percent_Identity=28.310502283105, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI193211015, Length=238, Percent_Identity=29.4117647058824, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71996809, Length=238, Percent_Identity=29.4117647058824, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI193211017, Length=238, Percent_Identity=29.4117647058824, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193202349, Length=221, Percent_Identity=30.316742081448, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI25146777, Length=240, Percent_Identity=28.75, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17558664, Length=237, Percent_Identity=29.1139240506329, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI193209708, Length=231, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI115534520, Length=237, Percent_Identity=26.1603375527426, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI71992290, Length=235, Percent_Identity=25.9574468085106, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17565938, Length=234, Percent_Identity=26.9230769230769, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI212646699, Length=211, Percent_Identity=29.8578199052133, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17569145, Length=217, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI86563255, Length=198, Percent_Identity=29.7979797979798, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17569143, Length=231, Percent_Identity=28.1385281385281, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17538654, Length=211, Percent_Identity=30.8056872037915, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115533592, Length=232, Percent_Identity=27.1551724137931, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24666092, Length=227, Percent_Identity=27.3127753303965, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24641565, Length=242, Percent_Identity=29.3388429752066, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24643674, Length=225, Percent_Identity=26.2222222222222, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI281363262, Length=230, Percent_Identity=27.3913043478261, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24653245, Length=230, Percent_Identity=28.2608695652174, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI85724864, Length=220, Percent_Identity=30.4545454545455, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24580555, Length=220, Percent_Identity=30.4545454545455, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI85816269, Length=213, Percent_Identity=30.0469483568075, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24580553, Length=213, Percent_Identity=30.0469483568075, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI161076684, Length=214, Percent_Identity=28.9719626168224, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24581617, Length=214, Percent_Identity=28.9719626168224, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24581615, Length=214, Percent_Identity=28.9719626168224, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI161076682, Length=214, Percent_Identity=28.9719626168224, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI221512771, Length=227, Percent_Identity=25.5506607929515, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24581191, Length=205, Percent_Identity=27.8048780487805, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24581189, Length=205, Percent_Identity=27.8048780487805, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24581193, Length=205, Percent_Identity=27.8048780487805, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24581195, Length=205, Percent_Identity=27.8048780487805, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI23397593, Length=239, Percent_Identity=28.0334728033473, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR012700
- InterPro:   IPR013563 [H]

Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]

EC number: NA

Molecular weight: Translated: 28554; Mature: 28423

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDEPLLRVSALSKFYGSRVGCDNVSFDLWPGEVLAVVGESGSGKTTLLNCLSTRLLPSS
CCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEECCCCCCHHHHHHHHHHHCCCCC
GTAGYRMRDGQFRELYRMSEAERRFLMRTDWGFVHQNPADGLRMTVSAGANVGERLMAVG
CCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHC
DRHYGKIRATAVDWLSRVEIEQDRIDDEPRAFSGGMRQRLQIARNLVTGPRLVFMDEPTG
CCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
GLDVSVQARLLDLLRGLVTDLGLAAIVVTHDLAVARLLSQRMMVMKDGRVVESGLTDRVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHCCCCHHHH
DDPRAPYTQLLVSSILQV
CCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
TDEPLLRVSALSKFYGSRVGCDNVSFDLWPGEVLAVVGESGSGKTTLLNCLSTRLLPSS
CCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEECCCCCCHHHHHHHHHHHCCCCC
GTAGYRMRDGQFRELYRMSEAERRFLMRTDWGFVHQNPADGLRMTVSAGANVGERLMAVG
CCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHC
DRHYGKIRATAVDWLSRVEIEQDRIDDEPRAFSGGMRQRLQIARNLVTGPRLVFMDEPTG
CCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
GLDVSVQARLLDLLRGLVTDLGLAAIVVTHDLAVARLLSQRMMVMKDGRVVESGLTDRVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHCCCCHHHH
DDPRAPYTQLLVSSILQV
CCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2155230; 1840580; 7610040; 9278503 [H]