| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472813
Identifier: 13472813
GI number: 13472813
Start: 2579004
End: 2579534
Strand: Reverse
Name: 13472813
Synonym: mll3227
Alternate gene names: NA
Gene position: 2579534-2579004 (Counterclockwise)
Preceding gene: 13472814
Following gene: 13472812
Centisome position: 36.66
GC content: 66.29
Gene sequence:
>531_bases ATGACCGAAACGACGACACCGGAGACCCGGCTCTGGACCCCGCAGGGTTTTCGCGAGGACGAGTGGGCTCATGCCGAGAA TGCGGACGAGCTGTGCGGCAATGGCCGCTTCATCCTGCCGCTGCAGGCGTTCCTCGACCTTGATCCGGAGGTGCGCCTGT CCGCCAAGGAGCGGCTTGGCGTGGAGCTGCAGCCTGGCGATCAGCTCGAGAAGATAGCCGACCTGCTTGACCAGCTGTCG CTGGTGGCGCTGGTCTTCCCGGCCTTCAGCGATGGGCGCTCCTTCTCCAAGGCCGAACTGCTGCGCAGCCGCTACCACTT CGAGGGTGCCGTTCGGGCCACCGGCCAGGTGCTGGTCGACCCGTTGCCGCACATGCTGCGTCTCGGCTTCGACGAGTTCG AGATCTCCAACCCGGTGCTGCTGAAGCGCCTGGAAGAGGACCGCACCGGCGGCTTGGGGCTTTACTACCAGCCAGCCGCC GTGCCGGAGCCCAAGGGCCCGAAATATTCCTGGCGGCGCGTTCGCAGCTGA
Upstream 100 bases:
>100_bases ATCCAGCCGGCCTGCGAACGGCGACCTCCACCCGGAGGCCGCCGGTTTTGTGCGGGAGGGGCTTTCAGCGGACTTGGATC TTGGGGCTTTAGGAATTTTG
Downstream 100 bases:
>100_bases CGCTGCGGTAATTCTACCATCTTTACATAGGCCGTAATCGAGCCTTCTCTTGGTCATCCGGACGGAAACATCCGCCGGGT GCGAGGGAGGAAGTCATGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MTETTTPETRLWTPQGFREDEWAHAENADELCGNGRFILPLQAFLDLDPEVRLSAKERLGVELQPGDQLEKIADLLDQLS LVALVFPAFSDGRSFSKAELLRSRYHFEGAVRATGQVLVDPLPHMLRLGFDEFEISNPVLLKRLEEDRTGGLGLYYQPAA VPEPKGPKYSWRRVRS
Sequences:
>Translated_176_residues MTETTTPETRLWTPQGFREDEWAHAENADELCGNGRFILPLQAFLDLDPEVRLSAKERLGVELQPGDQLEKIADLLDQLS LVALVFPAFSDGRSFSKAELLRSRYHFEGAVRATGQVLVDPLPHMLRLGFDEFEISNPVLLKRLEEDRTGGLGLYYQPAA VPEPKGPKYSWRRVRS >Mature_175_residues TETTTPETRLWTPQGFREDEWAHAENADELCGNGRFILPLQAFLDLDPEVRLSAKERLGVELQPGDQLEKIADLLDQLSL VALVFPAFSDGRSFSKAELLRSRYHFEGAVRATGQVLVDPLPHMLRLGFDEFEISNPVLLKRLEEDRTGGLGLYYQPAAV PEPKGPKYSWRRVRS
Specific function: Unknown
COG id: COG3749
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19937; Mature: 19806
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETTTPETRLWTPQGFREDEWAHAENADELCGNGRFILPLQAFLDLDPEVRLSAKERLG CCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHCCCCEEEEHHHHHCCCCCCEECHHHHCC VELQPGDQLEKIADLLDQLSLVALVFPAFSDGRSFSKAELLRSRYHFEGAVRATGQVLVD CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHCCCHHHHH PLPHMLRLGFDEFEISNPVLLKRLEEDRTGGLGLYYQPAAVPEPKGPKYSWRRVRS HHHHHHHCCCCHHCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHCCC >Mature Secondary Structure TETTTPETRLWTPQGFREDEWAHAENADELCGNGRFILPLQAFLDLDPEVRLSAKERLG CCCCCCCCEEECCCCCCCCCCCCCCCHHHHHCCCCEEEEHHHHHCCCCCCEECHHHHCC VELQPGDQLEKIADLLDQLSLVALVFPAFSDGRSFSKAELLRSRYHFEGAVRATGQVLVD CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHCCCHHHHH PLPHMLRLGFDEFEISNPVLLKRLEEDRTGGLGLYYQPAAVPEPKGPKYSWRRVRS HHHHHHHCCCCHHCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA