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The map label for this gene is yhdH [H]

Identifier: 13472803

GI number: 13472803

Start: 2568446

End: 2569435

Strand: Direct

Name: yhdH [H]

Synonym: mlr3212

Alternate gene names: 13472803

Gene position: 2568446-2569435 (Clockwise)

Preceding gene: 13472802

Following gene: 13472804

Centisome position: 36.5

GC content: 67.68

Gene sequence:

>990_bases
ATGTCCGAAACCTTCAAAGCCATCCTCGTCTCGCGCGACGCCGACAAGAAACAGTCGGTCGCCGTGACCGACCTCACCGA
AGCCGACCTGATGGAGGGTGAAGTCACCGTCGCGGTCGAGGCAACGACGGTGAACTACAAGGATGGACTGGCGATTACCG
GCAAGGCGCCGGTGGTCCGCCGCTGGCCGCTGGTGCCGGGCATCGACTTCGCCGGCACGGTCATCTCGTCCTCGAATCCC
GACTGGCGCAAGGGAGACAAGGTCATCCTGAATGGCTGGGGCGTCGGCGAGACGCATTTCGGCGCCTATGCGGGGCGCGC
CCGTGTCAAGGGCGATTGGCTGGTGCCGCTGCCGGAAGGCATCAGCGCCCATGACGCGATGGCGGTCGGCACCGCCGGCT
ATACCGCCATGCTCTGCGTCATGGCGCTGGAGCGGCACGGCATCCTGCCCGATCGCGGCCCGGTGGTGGTGACAGGTGCT
GCCGGCGGCGTCGGTTCGGTCGCGGTCTCCATCCTGTCCAGCCTCGGGTACCACGTCATTGCGTCGACCGGACGCAATGC
CGAAAGCCCCTATCTGATCAATCTCGGCGCCGCCGAGGTGATCTCGCGGGACGAGCTCAGCCAGCCCGCCAAGCCCCTGG
CCAAGGAACGCTGGGCCGGCGGCATCGATTCGGTCGGCAGCCACACGCTGGCCAATGTGCTGTCGATGACCTCCTATGGC
GGCGCGGTCGCGGCCTGCGGCCTGGCCGGCGGCATGGACCTGCCAGCGAGCGTGGCCCCCTTCATTCTGCGCGGCGTCTC
GCTGCTCGGTATCGATTCGGTGATGGCGCCGAAGGCCGTGCGCCTCGAGGCCTGGCGGCGCATCGGCGCCGATCTCGACC
TGCAGAAGCTCGCCAGCCTGTCCACGACCATCGGCTTCGACGGCATCATCGATGCCGCGCACGACATCGTCGACGGCAAG
ATCCGCGGTCGCGTCGTCGTCGACATGTGA

Upstream 100 bases:

>100_bases
TTCGAACGCCAAGCCTTCCAAAGCCAAGCCTTCCAAAGATTGACCCCACGCGGCCGCCGCCGCACAGTCCAGGACGCCAA
GCAAGCGCGCGGAGAAAAAG

Downstream 100 bases:

>100_bases
CCGCATCGCGGGTCGCAGGCAAGGAGCGGACGGATCGCCTAATCCCGGTGGCGAATCCGCTGCTGTCGGGACAAAAACGC
CTATCCGCTAAAATTCGAAC

Product: dehydrogenase (zinc-binding alcohol dehydrogenase, NADPH quinone oxidoreductase, oxidoreductase)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MSETFKAILVSRDADKKQSVAVTDLTEADLMEGEVTVAVEATTVNYKDGLAITGKAPVVRRWPLVPGIDFAGTVISSSNP
DWRKGDKVILNGWGVGETHFGAYAGRARVKGDWLVPLPEGISAHDAMAVGTAGYTAMLCVMALERHGILPDRGPVVVTGA
AGGVGSVAVSILSSLGYHVIASTGRNAESPYLINLGAAEVISRDELSQPAKPLAKERWAGGIDSVGSHTLANVLSMTSYG
GAVAACGLAGGMDLPASVAPFILRGVSLLGIDSVMAPKAVRLEAWRRIGADLDLQKLASLSTTIGFDGIIDAAHDIVDGK
IRGRVVVDM

Sequences:

>Translated_329_residues
MSETFKAILVSRDADKKQSVAVTDLTEADLMEGEVTVAVEATTVNYKDGLAITGKAPVVRRWPLVPGIDFAGTVISSSNP
DWRKGDKVILNGWGVGETHFGAYAGRARVKGDWLVPLPEGISAHDAMAVGTAGYTAMLCVMALERHGILPDRGPVVVTGA
AGGVGSVAVSILSSLGYHVIASTGRNAESPYLINLGAAEVISRDELSQPAKPLAKERWAGGIDSVGSHTLANVLSMTSYG
GAVAACGLAGGMDLPASVAPFILRGVSLLGIDSVMAPKAVRLEAWRRIGADLDLQKLASLSTTIGFDGIIDAAHDIVDGK
IRGRVVVDM
>Mature_328_residues
SETFKAILVSRDADKKQSVAVTDLTEADLMEGEVTVAVEATTVNYKDGLAITGKAPVVRRWPLVPGIDFAGTVISSSNPD
WRKGDKVILNGWGVGETHFGAYAGRARVKGDWLVPLPEGISAHDAMAVGTAGYTAMLCVMALERHGILPDRGPVVVTGAA
GGVGSVAVSILSSLGYHVIASTGRNAESPYLINLGAAEVISRDELSQPAKPLAKERWAGGIDSVGSHTLANVLSMTSYGG
AVAACGLAGGMDLPASVAPFILRGVSLLGIDSVMAPKAVRLEAWRRIGADLDLQKLASLSTTIGFDGIIDAAHDIVDGKI
RGRVVVDM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789651, Length=325, Percent_Identity=50.7692307692308, Blast_Score=329, Evalue=1e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040
- InterPro:   IPR014188 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 34154; Mature: 34022

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETFKAILVSRDADKKQSVAVTDLTEADLMEGEVTVAVEATTVNYKDGLAITGKAPVVR
CCCCEEEEEEECCCCCCCCEEEEECCHHHHCCCCEEEEEEEEEEECCCCEEEECCCCCEE
RWPLVPGIDFAGTVISSSNPDWRKGDKVILNGWGVGETHFGAYAGRARVKGDWLVPLPEG
ECCCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCHHCCCCEECCCEEEECCCC
ISAHDAMAVGTAGYTAMLCVMALERHGILPDRGPVVVTGAAGGVGSVAVSILSSLGYHVI
CCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEE
ASTGRNAESPYLINLGAAEVISRDELSQPAKPLAKERWAGGIDSVGSHTLANVLSMTSYG
EECCCCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC
GAVAACGLAGGMDLPASVAPFILRGVSLLGIDSVMAPKAVRLEAWRRIGADLDLQKLASL
CHHHHHHHCCCCCCCHHHHHHHHHCHHHCCCCHHHCCHHHHHHHHHHHCCCCCHHHHHHH
STTIGFDGIIDAAHDIVDGKIRGRVVVDM
HHHCCCCHHHHHHHHHHCCCCCCEEEEEC
>Mature Secondary Structure 
SETFKAILVSRDADKKQSVAVTDLTEADLMEGEVTVAVEATTVNYKDGLAITGKAPVVR
CCCEEEEEEECCCCCCCCEEEEECCHHHHCCCCEEEEEEEEEEECCCCEEEECCCCCEE
RWPLVPGIDFAGTVISSSNPDWRKGDKVILNGWGVGETHFGAYAGRARVKGDWLVPLPEG
ECCCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCHHCCCCEECCCEEEECCCC
ISAHDAMAVGTAGYTAMLCVMALERHGILPDRGPVVVTGAAGGVGSVAVSILSSLGYHVI
CCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEE
ASTGRNAESPYLINLGAAEVISRDELSQPAKPLAKERWAGGIDSVGSHTLANVLSMTSYG
EECCCCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC
GAVAACGLAGGMDLPASVAPFILRGVSLLGIDSVMAPKAVRLEAWRRIGADLDLQKLASL
CHHHHHHHCCCCCCCHHHHHHHHHCHHHCCCCHHHCCHHHHHHHHHHHCCCCCHHHHHHH
STTIGFDGIIDAAHDIVDGKIRGRVVVDM
HHHCCCCHHHHHHHHHHCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1370469; 9278503 [H]