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The map label for this gene is nodN [H]

Identifier: 13472713

GI number: 13472713

Start: 2490521

End: 2491006

Strand: Direct

Name: nodN [H]

Synonym: mlr3097

Alternate gene names: 13472713

Gene position: 2490521-2491006 (Clockwise)

Preceding gene: 13472712

Following gene: 13472714

Centisome position: 35.4

GC content: 64.4

Gene sequence:

>486_bases
ATGAGCGTGGAACCGATCAGTCTCGATGTGCTTCTGGCCAGTGTCGGCAAGGAGGTTGGCGTTTCGCCGTGGCGGGTGGT
GACGCAGCGCATGATCGACCAGTTCGCCGACGCCACCGACGACCACCAGTTCATCCACTGCGATCCCGAGCGGGCCAAGC
GCGAGACGCCGTTTGGCGGCACCATCGCACATGGTTTCCTGTCGCTGTCGCTGCTCTCGGCAATGACCTTCGAGACCATG
CCGCCGCTGGAAAACAGCAAGATGGGCGTCAACCACGGCTTCGATTCGCTGCGCTTCCTGGCCCCGGTGAAGACCGGCGC
GCGCATCCGCACCCGTTTCGTGTTGGCCGATGTCAAGGTGAGACCCTCGGGCTGGGTGCAGACGGCGCACGACGTGACGA
TCGAGATCGAGGGCTCGAAGAAACCGGCCCTGACTGCCCGCTGGCTGACGCTGACGCTGATCGAACGCCAGCCCGAGACC
GCATGA

Upstream 100 bases:

>100_bases
CATCCTGCCGATAGACGGCGGACAGTCGGTGCAGCATGGCTTGACCTTGTTCAAGGAATGACATTTTCCGGCCGTAGAAG
CCGGAGGTGAACTGGAGGAC

Downstream 100 bases:

>100_bases
ACGACCCCAACGCGCTCGACCAGGCAGCGCTTGCGCCTTACCTCGAGGCGGAAATCCCCGGGTTTTCCGGGCTTGCTTCC
ATCGAAAAATTCAAATCCGG

Product: nodulation protein NodN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MSVEPISLDVLLASVGKEVGVSPWRVVTQRMIDQFADATDDHQFIHCDPERAKRETPFGGTIAHGFLSLSLLSAMTFETM
PPLENSKMGVNHGFDSLRFLAPVKTGARIRTRFVLADVKVRPSGWVQTAHDVTIEIEGSKKPALTARWLTLTLIERQPET
A

Sequences:

>Translated_161_residues
MSVEPISLDVLLASVGKEVGVSPWRVVTQRMIDQFADATDDHQFIHCDPERAKRETPFGGTIAHGFLSLSLLSAMTFETM
PPLENSKMGVNHGFDSLRFLAPVKTGARIRTRFVLADVKVRPSGWVQTAHDVTIEIEGSKKPALTARWLTLTLIERQPET
A
>Mature_160_residues
SVEPISLDVLLASVGKEVGVSPWRVVTQRMIDQFADATDDHQFIHCDPERAKRETPFGGTIAHGFLSLSLLSAMTFETMP
PLENSKMGVNHGFDSLRFLAPVKTGARIRTRFVLADVKVRPSGWVQTAHDVTIEIEGSKKPALTARWLTLTLIERQPETA

Specific function: Involved in the production of the root hair deformation (HAD) factor specifically on medicago [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To the R.leguminosarum biovar viciae counterpart [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002539 [H]

Pfam domain/function: PF01575 MaoC_dehydratas [H]

EC number: NA

Molecular weight: Translated: 17840; Mature: 17709

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVEPISLDVLLASVGKEVGVSPWRVVTQRMIDQFADATDDHQFIHCDPERAKRETPFGG
CCCCCHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHCCCCCCC
TIAHGFLSLSLLSAMTFETMPPLENSKMGVNHGFDSLRFLAPVKTGARIRTRFVLADVKV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHEEEECCCCCCEEEEEEEEEEEEE
RPSGWVQTAHDVTIEIEGSKKPALTARWLTLTLIERQPETA
CCCCCEEECCEEEEEEECCCCCCEEEHHEEEEEEECCCCCC
>Mature Secondary Structure 
SVEPISLDVLLASVGKEVGVSPWRVVTQRMIDQFADATDDHQFIHCDPERAKRETPFGG
CCCCHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHCCCCCCC
TIAHGFLSLSLLSAMTFETMPPLENSKMGVNHGFDSLRFLAPVKTGARIRTRFVLADVKV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHEEEECCCCCCEEEEEEEEEEEEE
RPSGWVQTAHDVTIEIEGSKKPALTARWLTLTLIERQPETA
CCCCCEEECCEEEEEEECCCCCCEEEHHEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1909418; 11481432 [H]