| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is rhlG [H]
Identifier: 13472712
GI number: 13472712
Start: 2489666
End: 2490481
Strand: Direct
Name: rhlG [H]
Synonym: mlr3096
Alternate gene names: 13472712
Gene position: 2489666-2490481 (Clockwise)
Preceding gene: 13472703
Following gene: 13472713
Centisome position: 35.38
GC content: 65.69
Gene sequence:
>816_bases ATGGCCTATCTGGACGAGCTGTTTTCGGTGGCCGGCAAGACCGCGCTGGTGACGGGCGCGGCGACCGGTATCGGCCGCAT GGCGGCGGCAGCGCTGGTCAAGGCCGGCGCCAGCGTCATGATCGCTTCGCGCAAGGGCGAGGATTGCATCAAGGTCGCCA ATGCGTTCAACGGGCTCGGCGCCCCTGGCCGGGCCGAGGGCTTTGCCGGCGACGTCTCCAGCGAGGCCGGCATCGCGGCA CTCGTCGCCGAGGTCAAGGCGCGGACCGGCAAACTCGGCATCCTGATCAACAATGCCGGCGTTTCCTGGGGCGCGCCGCT GGAGAGTTTTCCCTATTCGGCATGGGCCAAGGTGCTCGGCGTCAATGTCACAGCCGTCTTCCACCTGACCCGCGAATTGC TGCCGCTGCTTGAAGCCGCGGCAAGCGACGCCGATCCGGCCCGGGTGATCAATCTGGGTTCGGTGATGGGGACGCAGCCA TTGGCCGACGACGCCTATTCCTACACGGCCTCCAAGGCCGCGGTGCATCATCTGACGCGCACGCTCGCGCTCGAATTCGC CGCCCGCCGCATCACCGTCAACGCCTTTGCCCCCGGCCCTTTCCAAAGCCGCATGACGGCCTTTGCCACGGGTACGGATG AACAGGCCAAACATGTCGGCGGCCATGTTCCGATCGGCCGTATCGGCGCACCGGATGACATTGCCGGCGCAACGCTCTAT TTGTGCAGCCGTGCAGGCAGCTATGTCACCGGCGCCATCCTGCCGATAGACGGCGGACAGTCGGTGCAGCATGGCTTGAC CTTGTTCAAGGAATGA
Upstream 100 bases:
>100_bases TCATAGAGGCCCGGCAATTTACCCGTGGCAAGGATGACCGTACTTCGGATAGCCTTGTCAACGCGAACTCTTTGCCCAGG GCAAGGCGCGGAGGATTGGA
Downstream 100 bases:
>100_bases CATTTTCCGGCCGTAGAAGCCGGAGGTGAACTGGAGGACATGAGCGTGGAACCGATCAGTCTCGATGTGCTTCTGGCCAG TGTCGGCAAGGAGGTTGGCG
Product: short chain dehydrogenase/reductase family protein
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MAYLDELFSVAGKTALVTGAATGIGRMAAAALVKAGASVMIASRKGEDCIKVANAFNGLGAPGRAEGFAGDVSSEAGIAA LVAEVKARTGKLGILINNAGVSWGAPLESFPYSAWAKVLGVNVTAVFHLTRELLPLLEAAASDADPARVINLGSVMGTQP LADDAYSYTASKAAVHHLTRTLALEFAARRITVNAFAPGPFQSRMTAFATGTDEQAKHVGGHVPIGRIGAPDDIAGATLY LCSRAGSYVTGAILPIDGGQSVQHGLTLFKE
Sequences:
>Translated_271_residues MAYLDELFSVAGKTALVTGAATGIGRMAAAALVKAGASVMIASRKGEDCIKVANAFNGLGAPGRAEGFAGDVSSEAGIAA LVAEVKARTGKLGILINNAGVSWGAPLESFPYSAWAKVLGVNVTAVFHLTRELLPLLEAAASDADPARVINLGSVMGTQP LADDAYSYTASKAAVHHLTRTLALEFAARRITVNAFAPGPFQSRMTAFATGTDEQAKHVGGHVPIGRIGAPDDIAGATLY LCSRAGSYVTGAILPIDGGQSVQHGLTLFKE >Mature_270_residues AYLDELFSVAGKTALVTGAATGIGRMAAAALVKAGASVMIASRKGEDCIKVANAFNGLGAPGRAEGFAGDVSSEAGIAAL VAEVKARTGKLGILINNAGVSWGAPLESFPYSAWAKVLGVNVTAVFHLTRELLPLLEAAASDADPARVINLGSVMGTQPL ADDAYSYTASKAAVHHLTRTLALEFAARRITVNAFAPGPFQSRMTAFATGTDEQAKHVGGHVPIGRIGAPDDIAGATLYL CSRAGSYVTGAILPIDGGQSVQHGLTLFKE
Specific function: Required for the synthesis of the beta-hydroxy acid moiety of rhamnolipids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI19923817, Length=258, Percent_Identity=29.4573643410853, Blast_Score=111, Evalue=8e-25, Organism=Homo sapiens, GI32483357, Length=253, Percent_Identity=31.2252964426877, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI5031737, Length=257, Percent_Identity=31.9066147859922, Blast_Score=101, Evalue=6e-22, Organism=Homo sapiens, GI10190704, Length=258, Percent_Identity=31.0077519379845, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI7705925, Length=255, Percent_Identity=29.0196078431373, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI126723750, Length=256, Percent_Identity=29.6875, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI15277342, Length=254, Percent_Identity=29.1338582677165, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI109715829, Length=245, Percent_Identity=29.3877551020408, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI4503301, Length=258, Percent_Identity=28.2945736434109, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI40254992, Length=247, Percent_Identity=25.5060728744939, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI59889578, Length=243, Percent_Identity=29.2181069958848, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI33667109, Length=202, Percent_Identity=32.1782178217822, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI31542939, Length=192, Percent_Identity=31.25, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI66933014, Length=257, Percent_Identity=28.7937743190661, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI142976729, Length=186, Percent_Identity=31.1827956989247, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI225579078, Length=207, Percent_Identity=31.4009661835749, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI224922801, Length=174, Percent_Identity=31.6091954022989, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI1790717, Length=260, Percent_Identity=33.8461538461538, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI1787335, Length=248, Percent_Identity=34.6774193548387, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI1789208, Length=257, Percent_Identity=31.5175097276265, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI1787905, Length=248, Percent_Identity=34.2741935483871, Blast_Score=114, Evalue=5e-27, Organism=Escherichia coli, GI87082160, Length=265, Percent_Identity=30.5660377358491, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1789378, Length=253, Percent_Identity=32.8063241106719, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1788459, Length=252, Percent_Identity=30.5555555555556, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI87082100, Length=266, Percent_Identity=28.1954887218045, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI2367175, Length=248, Percent_Identity=30.6451612903226, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI2367365, Length=249, Percent_Identity=30.9236947791165, Blast_Score=81, Evalue=9e-17, Organism=Escherichia coli, GI1786812, Length=260, Percent_Identity=27.6923076923077, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1789057, Length=258, Percent_Identity=26.7441860465116, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1787526, Length=255, Percent_Identity=27.843137254902, Blast_Score=65, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17560676, Length=249, Percent_Identity=32.5301204819277, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI25147288, Length=251, Percent_Identity=33.4661354581673, Blast_Score=111, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17561402, Length=253, Percent_Identity=33.596837944664, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17562910, Length=269, Percent_Identity=30.1115241635688, Blast_Score=104, Evalue=6e-23, Organism=Caenorhabditis elegans, GI71994600, Length=258, Percent_Identity=30.6201550387597, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17560150, Length=268, Percent_Identity=27.9850746268657, Blast_Score=100, Evalue=6e-22, Organism=Caenorhabditis elegans, GI17560332, Length=265, Percent_Identity=29.811320754717, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17562904, Length=270, Percent_Identity=29.6296296296296, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17562906, Length=273, Percent_Identity=30.4029304029304, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI71994604, Length=257, Percent_Identity=29.1828793774319, Blast_Score=96, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17559104, Length=272, Percent_Identity=28.3088235294118, Blast_Score=94, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17555706, Length=260, Percent_Identity=29.6153846153846, Blast_Score=94, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17565030, Length=268, Percent_Identity=30.2238805970149, Blast_Score=94, Evalue=9e-20, Organism=Caenorhabditis elegans, GI17562908, Length=274, Percent_Identity=28.8321167883212, Blast_Score=94, Evalue=9e-20, Organism=Caenorhabditis elegans, GI17562990, Length=268, Percent_Identity=27.2388059701493, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17531453, Length=266, Percent_Identity=27.4436090225564, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI193204405, Length=269, Percent_Identity=28.996282527881, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17544670, Length=283, Percent_Identity=26.8551236749117, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17563726, Length=265, Percent_Identity=28.3018867924528, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17538480, Length=273, Percent_Identity=30.03663003663, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17551412, Length=270, Percent_Identity=28.1481481481481, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI72000259, Length=271, Percent_Identity=29.8892988929889, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI115534694, Length=261, Percent_Identity=29.1187739463602, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17536651, Length=262, Percent_Identity=27.8625954198473, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17561272, Length=262, Percent_Identity=31.2977099236641, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17538486, Length=265, Percent_Identity=27.9245283018868, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17536025, Length=262, Percent_Identity=27.0992366412214, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17538182, Length=265, Percent_Identity=29.811320754717, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17564282, Length=194, Percent_Identity=30.4123711340206, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17560220, Length=281, Percent_Identity=27.4021352313167, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI193203117, Length=195, Percent_Identity=27.6923076923077, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI193203115, Length=193, Percent_Identity=27.979274611399, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17558994, Length=209, Percent_Identity=31.1004784688995, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6323882, Length=267, Percent_Identity=27.3408239700375, Blast_Score=82, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6324126, Length=265, Percent_Identity=25.6603773584906, Blast_Score=67, Evalue=4e-12, Organism=Drosophila melanogaster, GI23397609, Length=266, Percent_Identity=31.9548872180451, Blast_Score=115, Evalue=3e-26, Organism=Drosophila melanogaster, GI24643142, Length=253, Percent_Identity=32.4110671936759, Blast_Score=113, Evalue=1e-25, Organism=Drosophila melanogaster, GI24644339, Length=257, Percent_Identity=31.1284046692607, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI21357041, Length=258, Percent_Identity=30.2325581395349, Blast_Score=105, Evalue=2e-23, Organism=Drosophila melanogaster, GI28571526, Length=259, Percent_Identity=29.7297297297297, Blast_Score=104, Evalue=6e-23, Organism=Drosophila melanogaster, GI24644337, Length=258, Percent_Identity=33.7209302325581, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI21355319, Length=260, Percent_Identity=29.2307692307692, Blast_Score=98, Evalue=7e-21, Organism=Drosophila melanogaster, GI24639444, Length=252, Percent_Identity=31.7460317460317, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI24584744, Length=199, Percent_Identity=30.1507537688442, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI28574402, Length=199, Percent_Identity=30.1507537688442, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24584748, Length=199, Percent_Identity=30.1507537688442, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI161076933, Length=199, Percent_Identity=30.1507537688442, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI17737361, Length=261, Percent_Identity=27.5862068965517, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI21358495, Length=197, Percent_Identity=28.9340101522843, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI19921754, Length=208, Percent_Identity=31.25, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI161076371, Length=202, Percent_Identity=33.1683168316832, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 27693; Mature: 27562
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYLDELFSVAGKTALVTGAATGIGRMAAAALVKAGASVMIASRKGEDCIKVANAFNGLG CCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCC APGRAEGFAGDVSSEAGIAALVAEVKARTGKLGILINNAGVSWGAPLESFPYSAWAKVLG CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHCCHHHHHHHHC VNVTAVFHLTRELLPLLEAAASDADPARVINLGSVMGTQPLADDAYSYTASKAAVHHLTR CCHHHHHHHHHHHHHHHHHHCCCCCCHHEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHH TLALEFAARRITVNAFAPGPFQSRMTAFATGTDEQAKHVGGHVPIGRIGAPDDIAGATLY HHHHHHHHHEEEEEEECCCCHHHHHEEEECCCCHHHHHCCCCCCCCCCCCCCCHHHHHHH LCSRAGSYVTGAILPIDGGQSVQHGLTLFKE HHHCCCCEEEEEEEECCCCCHHHHHHHHHCC >Mature Secondary Structure AYLDELFSVAGKTALVTGAATGIGRMAAAALVKAGASVMIASRKGEDCIKVANAFNGLG CHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCC APGRAEGFAGDVSSEAGIAALVAEVKARTGKLGILINNAGVSWGAPLESFPYSAWAKVLG CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHCCHHHHHHHHC VNVTAVFHLTRELLPLLEAAASDADPARVINLGSVMGTQPLADDAYSYTASKAAVHHLTR CCHHHHHHHHHHHHHHHHHHCCCCCCHHEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHH TLALEFAARRITVNAFAPGPFQSRMTAFATGTDEQAKHVGGHVPIGRIGAPDDIAGATLY HHHHHHHHHEEEEEEECCCCHHHHHEEEECCCCHHHHHCCCCCCCCCCCCCCCHHHHHHH LCSRAGSYVTGAILPIDGGQSVQHGLTLFKE HHHCCCCEEEEEEEECCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9721281; 10984043 [H]