| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472705
Identifier: 13472705
GI number: 13472705
Start: 2483622
End: 2484032
Strand: Reverse
Name: 13472705
Synonym: mll3086
Alternate gene names: NA
Gene position: 2484032-2483622 (Counterclockwise)
Preceding gene: 13472706
Following gene: 13472704
Centisome position: 35.3
GC content: 61.8
Gene sequence:
>411_bases ATGAGCGGCGCCGACCAGCCCCGCCGTTCGACAGGCAGCAAGATCATCCGTTTTGCCATTGTCGGGCTGGCGAACACGGC CATCGACCTCGCCGGCTTTTTTCTGCTGCTCAAGTTGCATGTCCCGCCGCTGCCGGCCAATGTCATCTCATGGTCGATCG CCGTCATCTTCTCTTTCGTGGCCAACGGCTTCTGGTCGTTCGAGCGCAACCAGGCCATCCGGCTGCATGACGCTTTCCTG CGTTTCGTCTCGCTTGGGGCGTTGATTTCGCTCGGCGTCTCCAGCCTGTCGATCGCGCTTTTCGCCGGTATTGCCGGCGT GTGGCCGGCGAAGATCGGCGGTGTCATCGTGGCGGCGGTGTTGAACTTCCTTGCGGCGCGCTGGTCGATCGAAGGCCGGT TGCTGAAATAA
Upstream 100 bases:
>100_bases CGATGCAAGGCGTGCGTGAGGTGGAATACGCGGTGCTGGCCTCCGACGCGTTCGGTGCGAGCCTCGCCCGCGCCGGTGTC GAGATCATGGACGGCAAGGG
Downstream 100 bases:
>100_bases CGGCTACTGCGCCGGCTCCGCACCGACATAGGCGGCTTCCTCGAGCTCACACTGGAGGCGTGTTTCTTCATGGGTCTTCG CTGTGAGGAAGCGGCCAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MSGADQPRRSTGSKIIRFAIVGLANTAIDLAGFFLLLKLHVPPLPANVISWSIAVIFSFVANGFWSFERNQAIRLHDAFL RFVSLGALISLGVSSLSIALFAGIAGVWPAKIGGVIVAAVLNFLAARWSIEGRLLK
Sequences:
>Translated_136_residues MSGADQPRRSTGSKIIRFAIVGLANTAIDLAGFFLLLKLHVPPLPANVISWSIAVIFSFVANGFWSFERNQAIRLHDAFL RFVSLGALISLGVSSLSIALFAGIAGVWPAKIGGVIVAAVLNFLAARWSIEGRLLK >Mature_135_residues SGADQPRRSTGSKIIRFAIVGLANTAIDLAGFFLLLKLHVPPLPANVISWSIAVIFSFVANGFWSFERNQAIRLHDAFLR FVSLGALISLGVSSLSIALFAGIAGVWPAKIGGVIVAAVLNFLAARWSIEGRLLK
Specific function: Unknown
COG id: COG2246
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14546; Mature: 14415
Theoretical pI: Translated: 12.08; Mature: 12.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGADQPRRSTGSKIIRFAIVGLANTAIDLAGFFLLLKLHVPPLPANVISWSIAVIFSFV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH ANGFWSFERNQAIRLHDAFLRFVSLGALISLGVSSLSIALFAGIAGVWPAKIGGVIVAAV HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LNFLAARWSIEGRLLK HHHHHHHHCCCCEECC >Mature Secondary Structure SGADQPRRSTGSKIIRFAIVGLANTAIDLAGFFLLLKLHVPPLPANVISWSIAVIFSFV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH ANGFWSFERNQAIRLHDAFLRFVSLGALISLGVSSLSIALFAGIAGVWPAKIGGVIVAAV HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LNFLAARWSIEGRLLK HHHHHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA