| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is chbG [H]
Identifier: 13472706
GI number: 13472706
Start: 2484029
End: 2484847
Strand: Reverse
Name: chbG [H]
Synonym: mll3087
Alternate gene names: 13472706
Gene position: 2484847-2484029 (Counterclockwise)
Preceding gene: 13472707
Following gene: 13472705
Centisome position: 35.32
GC content: 68.62
Gene sequence:
>819_bases ATGAGGCGGCGCATCCGCCTGATCGCCGATGACTACGGCCTGGCGCCCGGCGTTTCCGCCGGAATTCTCGACCTGCTCGA TCGCGGCCGCCTGACCGGCACCAGCTGCATGACCGGCTTTCCGGAATGGCCTGATGCCGCGGCGCGCATAAAGCCGCTGT GCGGCCGCGCGGCGGTCGGGCTGCACCTGACCCTGACGGATCAACCGGCTTTCACCGGCCCGTCGAGCCTGGCGCCGGAA GGCCGGCTGCCGCCGCTGCGTTTGCTGGCGCTGCCGGTGCTGCGCGGCAAAATTGACGAGCGGGATGTCCATGCCGAGCT CAGCGCGCAGTACAGCCGCTTCGTCGAGGCGCTTGGCCGCCAGCCTGACTTCATCGACGGGCATCAGCATGTGCATTTTC TGCCGGTCGTGCGCACATGGCTGCGGGGACAGTTTTCCGAAACCAGCGGCAGGCCGGCGCTGCGCGGCGCGCCTGCCTTG GGCAATGCCGCCGTGGCGCCGAAAGTCGCGGCGATCGCTGCCGTGGCCGCCGGCTTCAACCGCTCGATGACACGCGCCGG CTTCACCCTTTTCGCGCCGCTGACCGGCATCTATGACTGGCGGCAGCCCGAGAGATTTGCTCCAGTTCTGCAGGCCGCTG TCGAGACACTGCCAGAACGAGGCCTGTTCATGTGCCATCCCGGCCATGTCGACGAGACGCTGCGGGCGCGCGACCCGATG CAAGGCGTGCGTGAGGTGGAATACGCGGTGCTGGCCTCCGACGCGTTCGGTGCGAGCCTCGCCCGCGCCGGTGTCGAGAT CATGGACGGCAAGGGATGA
Upstream 100 bases:
>100_bases TCTGGGTCACGCTTTCTGAAAGCAAAGACCGGCCGGTGTATATCGTGCGCGATGTCGTGCGCGCCGACGTTTCGGACAGG CCGCCAGGCGCGTCCGGCGC
Downstream 100 bases:
>100_bases GCGGCGCCGACCAGCCCCGCCGTTCGACAGGCAGCAAGATCATCCGTTTTGCCATTGTCGGGCTGGCGAACACGGCCATC GACCTCGCCGGCTTTTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MRRRIRLIADDYGLAPGVSAGILDLLDRGRLTGTSCMTGFPEWPDAAARIKPLCGRAAVGLHLTLTDQPAFTGPSSLAPE GRLPPLRLLALPVLRGKIDERDVHAELSAQYSRFVEALGRQPDFIDGHQHVHFLPVVRTWLRGQFSETSGRPALRGAPAL GNAAVAPKVAAIAAVAAGFNRSMTRAGFTLFAPLTGIYDWRQPERFAPVLQAAVETLPERGLFMCHPGHVDETLRARDPM QGVREVEYAVLASDAFGASLARAGVEIMDGKG
Sequences:
>Translated_272_residues MRRRIRLIADDYGLAPGVSAGILDLLDRGRLTGTSCMTGFPEWPDAAARIKPLCGRAAVGLHLTLTDQPAFTGPSSLAPE GRLPPLRLLALPVLRGKIDERDVHAELSAQYSRFVEALGRQPDFIDGHQHVHFLPVVRTWLRGQFSETSGRPALRGAPAL GNAAVAPKVAAIAAVAAGFNRSMTRAGFTLFAPLTGIYDWRQPERFAPVLQAAVETLPERGLFMCHPGHVDETLRARDPM QGVREVEYAVLASDAFGASLARAGVEIMDGKG >Mature_272_residues MRRRIRLIADDYGLAPGVSAGILDLLDRGRLTGTSCMTGFPEWPDAAARIKPLCGRAAVGLHLTLTDQPAFTGPSSLAPE GRLPPLRLLALPVLRGKIDERDVHAELSAQYSRFVEALGRQPDFIDGHQHVHFLPVVRTWLRGQFSETSGRPALRGAPAL GNAAVAPKVAAIAAVAAGFNRSMTRAGFTLFAPLTGIYDWRQPERFAPVLQAAVETLPERGLFMCHPGHVDETLRARDPM QGVREVEYAVLASDAFGASLARAGVEIMDGKG
Specific function: Unknown
COG id: COG3394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0249 family [H]
Homologues:
Organism=Escherichia coli, GI1788028, Length=276, Percent_Identity=25.7246376811594, Blast_Score=66, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002509 - InterPro: IPR006879 - InterPro: IPR022948 [H]
Pfam domain/function: PF04794 YdjC [H]
EC number: NA
Molecular weight: Translated: 29304; Mature: 29304
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRIRLIADDYGLAPGVSAGILDLLDRGRLTGTSCMTGFPEWPDAAARIKPLCGRAAVG CCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHCCCEEEE LHLTLTDQPAFTGPSSLAPEGRLPPLRLLALPVLRGKIDERDVHAELSAQYSRFVEALGR EEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC QPDFIDGHQHVHFLPVVRTWLRGQFSETSGRPALRGAPALGNAAVAPKVAAIAAVAAGFN CCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC RSMTRAGFTLFAPLTGIYDWRQPERFAPVLQAAVETLPERGLFMCHPGHVDETLRARDPM HHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHCCHH QGVREVEYAVLASDAFGASLARAGVEIMDGKG HHHHHHHHHHHHCCHHHHHHHHCCCCEECCCC >Mature Secondary Structure MRRRIRLIADDYGLAPGVSAGILDLLDRGRLTGTSCMTGFPEWPDAAARIKPLCGRAAVG CCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHCCCEEEE LHLTLTDQPAFTGPSSLAPEGRLPPLRLLALPVLRGKIDERDVHAELSAQYSRFVEALGR EEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC QPDFIDGHQHVHFLPVVRTWLRGQFSETSGRPALRGAPALGNAAVAPKVAAIAAVAAGFN CCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC RSMTRAGFTLFAPLTGIYDWRQPERFAPVLQAAVETLPERGLFMCHPGHVDETLRARDPM HHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHCCHH QGVREVEYAVLASDAFGASLARAGVEIMDGKG HHHHHHHHHHHHCCHHHHHHHHCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA