| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13472690
Identifier: 13472690
GI number: 13472690
Start: 2466892
End: 2467800
Strand: Reverse
Name: 13472690
Synonym: mll3063
Alternate gene names: NA
Gene position: 2467800-2466892 (Counterclockwise)
Preceding gene: 13472691
Following gene: 13472689
Centisome position: 35.07
GC content: 65.24
Gene sequence:
>909_bases ATGAAGCTGGTCAGCTACAACATCCAGTACGGGTTCGGCAGCGACGGCCGCTACGATCTTTCGCGCGCGGCGCGGATCGT CGACGGCGCCGACATCATTGCCTTGCAGGAGGTCGAGCGGCACTGGCAGCGCAGCCGTTTCGACGACCAGCCGGAGCTGC TGTCGCGCCTGCTGTCCGGGTATCACTGGGTCTACGGCCCGGCCTTCGACATGGATGCCAGCGAGCGGCGCGACGGTCGT CTGATCAATCGGCGTCGGCAGTTCGGCACCATGGTTTTGTCGAAGCTGCCAATTGTCTGGTCGCGCCTGCATGCACTGCC GATGCGCCGGACGCTCAGGCCACTCAACACGCGCAACGCGGCGCTCGAATGCATGATCCGTACGCCGGCTGGCCCGGTGC GGGTCCTGTCCTTGCATCTCGCCCATATCGCCGCTGAAGAGCGGCTGGAGCAGATCGATTATCTGCTCGCCGAACACCGC CGTGCGCCGTCCGAAGGCGGGCCGTGGAGCGGCATCGATGACGAGCCTTCGCGCAACTGGACCAGCGGCGAGATCGAGCC GGAAAATCCGCTGGCGGCAATCTGGATGGGCGATTTCAACATGGAGCCGGGCAGCGCCGAATACCGCCGCATCGTCGGCC GCACGCCCTATCATCGGGGTGCGGCCTATCTCGACGGCTTCGTCGATGCCGCAGCCGTGGCGATCGAGCTGGCTGGTGAC TTCCACACCCACGAGAAGATCATCGACGGCAGGCTGGCAAAGCGCCGGCTCGACCATTGTTTCGTCGGCGGGGTGTTCGC GAGGCGGGTCCGCTCGGTCAGATCCGACATAGGCGAAATGGCGTCCGACCACTTTCCGGTCCGGGTCGACATCGATCTCG AAACGCCGCTTGGCTCGGGAGGTCGATAG
Upstream 100 bases:
>100_bases GCGGGGCAGGGGGACGCTCCTGGCACAAGCCGCTTGCGTTCTCGTTGCAAGCAATCCACTGAGCCGCTACTGCCATCACC GAAGGTGAGCCGGGTAAGCA
Downstream 100 bases:
>100_bases ACCCGAAATGACGCTTTTCGTGTTCTTCGCGGTGCTTGCCGCGGCCGCCATGCACGCGATCTGGAACGCACTGGTCAAGG TGCATCTCGACCGCTTCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase; Endonuclease/Exonuclease/Phosphatase Family Protein; Phosphatase; Phosphatase Protein; Endonuclease / Exonuclease / Phosphatase; Metal-Dependent Exonuclease Protein; Endonuclease/Exonuclease/Phosphatase Domain Protein; Endonuclease/Exonuclease/Phosphatase Protein
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MKLVSYNIQYGFGSDGRYDLSRAARIVDGADIIALQEVERHWQRSRFDDQPELLSRLLSGYHWVYGPAFDMDASERRDGR LINRRRQFGTMVLSKLPIVWSRLHALPMRRTLRPLNTRNAALECMIRTPAGPVRVLSLHLAHIAAEERLEQIDYLLAEHR RAPSEGGPWSGIDDEPSRNWTSGEIEPENPLAAIWMGDFNMEPGSAEYRRIVGRTPYHRGAAYLDGFVDAAAVAIELAGD FHTHEKIIDGRLAKRRLDHCFVGGVFARRVRSVRSDIGEMASDHFPVRVDIDLETPLGSGGR
Sequences:
>Translated_302_residues MKLVSYNIQYGFGSDGRYDLSRAARIVDGADIIALQEVERHWQRSRFDDQPELLSRLLSGYHWVYGPAFDMDASERRDGR LINRRRQFGTMVLSKLPIVWSRLHALPMRRTLRPLNTRNAALECMIRTPAGPVRVLSLHLAHIAAEERLEQIDYLLAEHR RAPSEGGPWSGIDDEPSRNWTSGEIEPENPLAAIWMGDFNMEPGSAEYRRIVGRTPYHRGAAYLDGFVDAAAVAIELAGD FHTHEKIIDGRLAKRRLDHCFVGGVFARRVRSVRSDIGEMASDHFPVRVDIDLETPLGSGGR >Mature_302_residues MKLVSYNIQYGFGSDGRYDLSRAARIVDGADIIALQEVERHWQRSRFDDQPELLSRLLSGYHWVYGPAFDMDASERRDGR LINRRRQFGTMVLSKLPIVWSRLHALPMRRTLRPLNTRNAALECMIRTPAGPVRVLSLHLAHIAAEERLEQIDYLLAEHR RAPSEGGPWSGIDDEPSRNWTSGEIEPENPLAAIWMGDFNMEPGSAEYRRIVGRTPYHRGAAYLDGFVDAAAVAIELAGD FHTHEKIIDGRLAKRRLDHCFVGGVFARRVRSVRSDIGEMASDHFPVRVDIDLETPLGSGGR
Specific function: Unknown
COG id: COG3568
COG function: function code R; Metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34195; Mature: 34195
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLVSYNIQYGFGSDGRYDLSRAARIVDGADIIALQEVERHWQRSRFDDQPELLSRLLSG CCEEEEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC YHWVYGPAFDMDASERRDGRLINRRRQFGTMVLSKLPIVWSRLHALPMRRTLRPLNTRNA CCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ALECMIRTPAGPVRVLSLHLAHIAAEERLEQIDYLLAEHRRAPSEGGPWSGIDDEPSRNW EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC TSGEIEPENPLAAIWMGDFNMEPGSAEYRRIVGRTPYHRGAAYLDGFVDAAAVAIELAGD CCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC FHTHEKIIDGRLAKRRLDHCFVGGVFARRVRSVRSDIGEMASDHFPVRVDIDLETPLGSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC GR CC >Mature Secondary Structure MKLVSYNIQYGFGSDGRYDLSRAARIVDGADIIALQEVERHWQRSRFDDQPELLSRLLSG CCEEEEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC YHWVYGPAFDMDASERRDGRLINRRRQFGTMVLSKLPIVWSRLHALPMRRTLRPLNTRNA CCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ALECMIRTPAGPVRVLSLHLAHIAAEERLEQIDYLLAEHRRAPSEGGPWSGIDDEPSRNW EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC TSGEIEPENPLAAIWMGDFNMEPGSAEYRRIVGRTPYHRGAAYLDGFVDAAAVAIELAGD CCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC FHTHEKIIDGRLAKRRLDHCFVGGVFARRVRSVRSDIGEMASDHFPVRVDIDLETPLGSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC GR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA