| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472689
Identifier: 13472689
GI number: 13472689
Start: 2466039
End: 2466884
Strand: Reverse
Name: 13472689
Synonym: mll3062
Alternate gene names: NA
Gene position: 2466884-2466039 (Counterclockwise)
Preceding gene: 13472690
Following gene: 13472674
Centisome position: 35.06
GC content: 64.89
Gene sequence:
>846_bases ATGACGCTTTTCGTGTTCTTCGCGGTGCTTGCCGCGGCCGCCATGCACGCGATCTGGAACGCACTGGTCAAGGTGCATCT CGACCGCTTCCTGTCGATCACGCTGATGACATTGGGCATGGGGTTTGCCGCGCTGTTCGTGCTGCCTTTCGTCGAGTTCC CGAAGGCCGAGGTCTGGCCATTCATTCTCGCTTCGGTGGTCTTCCACATGGGCTACCGAACCTTCCTGATCGGCGCCTAC AGGGCCGGCGATTTCGCCCAGACCTATCCGCTGGCGCGCGGCACCGCACCTTTGCTGGCAGCACTTGGTGGCATCGTGGT GGTGCAGGAGGTGCCGGCGCCGTTTGCCATTCTCGGCATCCTGCTTTTGTCGGCCGGCACGCTGGTGATGTCGTTTCGCG GCGGCGCGCATCTGGAAAGGCTGAACCTGCGTGCGGTCGGTTTTGCGCTAGGCACCTCGATCTTTATCGCCAGCTATACT CTGTCCGACGGCAGCGGTGCGCGGCTGGCGGCGACGGCGCAAAGCTACGCGGCGTGGCTGTTCGTCTGCGACGCGACGTG GGCACTGGTGCTGTGCGTGGTCTTCCGCGGACCGCAGTCACTGCCCGTGCTGGCGCGCGACTGGAAGGCCGGGCTGTTCA CCGGCGTGCTCAGCGGCGCTGCCTACTGGATCGTGATGTGGGCGATGACCAAGGCGCCGATCGCCTCGGTGGCATCGCTG CGCGAAACCTCGATCCTGTTCGCCATGCTGATCTCGGTCTACGCGCTTGGCGAGAAGATGACGGGCTGGCGCGGCGCCGC CGCGCTCAGCATCGTTGCCGGTGTCATCGCCCTCAGACTTGGCTAG
Upstream 100 bases:
>100_bases GTCAGATCCGACATAGGCGAAATGGCGTCCGACCACTTTCCGGTCCGGGTCGACATCGATCTCGAAACGCCGCTTGGCTC GGGAGGTCGATAGACCCGAA
Downstream 100 bases:
>100_bases CAGCCGTCAACCCAGGACGGTCATCACCTGGCCGCGCCGTTCCGGGCTGAAGCGGATGACGACGATGATGCAGATGGCGA CGACGCCGGCGAAAAGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Integral Membrane; DMT Family Permease; Inner Membrane Protein; Transporter Of DMT Superfamily; Transporter Dme Family; Transporter Permease Protein; Drug/Metabolite Transporter Superfamily Protein; DMT Superfamily Permease; EmrE Membrane Transporter Of Cations And Cationic Drugs; Drug/Metabolite Transporter Superfamily Permease; Transporter DME Family DMT Superfamily; Drug/Metabolite Exporter Family Protein; Small Multidrug Resistance Protein; Permease Protein
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MTLFVFFAVLAAAAMHAIWNALVKVHLDRFLSITLMTLGMGFAALFVLPFVEFPKAEVWPFILASVVFHMGYRTFLIGAY RAGDFAQTYPLARGTAPLLAALGGIVVVQEVPAPFAILGILLLSAGTLVMSFRGGAHLERLNLRAVGFALGTSIFIASYT LSDGSGARLAATAQSYAAWLFVCDATWALVLCVVFRGPQSLPVLARDWKAGLFTGVLSGAAYWIVMWAMTKAPIASVASL RETSILFAMLISVYALGEKMTGWRGAAALSIVAGVIALRLG
Sequences:
>Translated_281_residues MTLFVFFAVLAAAAMHAIWNALVKVHLDRFLSITLMTLGMGFAALFVLPFVEFPKAEVWPFILASVVFHMGYRTFLIGAY RAGDFAQTYPLARGTAPLLAALGGIVVVQEVPAPFAILGILLLSAGTLVMSFRGGAHLERLNLRAVGFALGTSIFIASYT LSDGSGARLAATAQSYAAWLFVCDATWALVLCVVFRGPQSLPVLARDWKAGLFTGVLSGAAYWIVMWAMTKAPIASVASL RETSILFAMLISVYALGEKMTGWRGAAALSIVAGVIALRLG >Mature_280_residues TLFVFFAVLAAAAMHAIWNALVKVHLDRFLSITLMTLGMGFAALFVLPFVEFPKAEVWPFILASVVFHMGYRTFLIGAYR AGDFAQTYPLARGTAPLLAALGGIVVVQEVPAPFAILGILLLSAGTLVMSFRGGAHLERLNLRAVGFALGTSIFIASYTL SDGSGARLAATAQSYAAWLFVCDATWALVLCVVFRGPQSLPVLARDWKAGLFTGVLSGAAYWIVMWAMTKAPIASVASLR ETSILFAMLISVYALGEKMTGWRGAAALSIVAGVIALRLG
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29943; Mature: 29812
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLFVFFAVLAAAAMHAIWNALVKVHLDRFLSITLMTLGMGFAALFVLPFVEFPKAEVWP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH FILASVVFHMGYRTFLIGAYRAGDFAQTYPLARGTAPLLAALGGIVVVQEVPAPFAILGI HHHHHHHHHCCHHHHHEEHHCCCCHHHHCCCCCCCHHHHHHHCCEEEEECCCCHHHHHHH LLLSAGTLVMSFRGGAHLERLNLRAVGFALGTSIFIASYTLSDGSGARLAATAQSYAAWL HHHCCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEHHHHHHHHHH FVCDATWALVLCVVFRGPQSLPVLARDWKAGLFTGVLSGAAYWIVMWAMTKAPIASVASL HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RETSILFAMLISVYALGEKMTGWRGAAALSIVAGVIALRLG HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TLFVFFAVLAAAAMHAIWNALVKVHLDRFLSITLMTLGMGFAALFVLPFVEFPKAEVWP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH FILASVVFHMGYRTFLIGAYRAGDFAQTYPLARGTAPLLAALGGIVVVQEVPAPFAILGI HHHHHHHHHCCHHHHHEEHHCCCCHHHHCCCCCCCHHHHHHHCCEEEEECCCCHHHHHHH LLLSAGTLVMSFRGGAHLERLNLRAVGFALGTSIFIASYTLSDGSGARLAATAQSYAAWL HHHCCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEHHHHHHHHHH FVCDATWALVLCVVFRGPQSLPVLARDWKAGLFTGVLSGAAYWIVMWAMTKAPIASVASL HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RETSILFAMLISVYALGEKMTGWRGAAALSIVAGVIALRLG HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA