Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is pldB [H]

Identifier: 13472666

GI number: 13472666

Start: 2442334

End: 2443311

Strand: Direct

Name: pldB [H]

Synonym: mlr3034

Alternate gene names: 13472666

Gene position: 2442334-2443311 (Clockwise)

Preceding gene: 13472664

Following gene: 13472667

Centisome position: 34.71

GC content: 65.24

Gene sequence:

>978_bases
ATGACGGACCTTCTCCACGACACGCCGCTTTTCCATGAAACTGAGGGCAATCCGCGACCGGAAAACGCTACCGGCGGCTT
TTTCATTACGCGCGACCGCAAGAAGATCCGCTATGGCCTCTTCGCGGCGGTGGCGCGCCCGATGCGGGGCACCGTGGTGC
TCCTGTCCGGCCGCAACGAGTGCATCGAGAAATATTTCGAAACCATCCGCGACCTTGCCGCCCGCGGCTTTGGTGTCGCC
ACGCTCGATTGGCGCGGCCAGGGCGATTCCGACCGGCTGATCCGCGATCGCCAGCGCGGCTATGTCAGGTCCTTCCGCGA
CTACACGGCCGATCTGGAGCAGTTCTTCGAGGAGATCGTGCTGCCCGATTGCCGCGGGCCGTATTACATCCTCGCCCATT
CAGCCGGAGCGGTGATCGCGCTGCTTGCCGCGCCGTCGATGGTGAACCGCGTGCGGCGCATGGTGCTGATCGCGCCATTC
CTGACGTTGCCCGACCTGCCGGTCTCGATCCGAACGGTCCGCCGCGTCTGTTCGGTCTTCTGCGCTTTGGGGCTCGGCCG
GCTCTATGCCGCCTGGGGTCCACGGCCCAGACACACGCTGCCGTTCGAGGCCAACAAGGTAACGTCGGATCCGCGGCGCT
ACCGCCGCAACACGCGCATCTACGAAGAGTATCCGCGAATGGCGCTTGGCGGTCCGACGATCCGCTGGCTGCAGGCGGCG
GCGAAGGCGTCGGAAGCCATCAGCGACCCCGACTTCATGGCCCGCATACAGGTGCCTCTGCTGATCATCGCCGCCGGCGC
CGACCGGGTCGTCTCGACCAGGGCGGTGGAAGCCTATGCCAGAAGCCTGAGGCTCGGTTCGCTGCTGATGATCGACGGCT
CCAAGCACGAAATCCTGCAAGAGGTCGATCTCTACCGCGAACAATTCCTTGCCGCCTTCGACGCCTTCATCCCCGGCTCG
GACGACCCGACGGCCTGA

Upstream 100 bases:

>100_bases
AACCCGGATTTGCTTTGCTTTTGATGCATTGGCGTCTATCACCTTGACGAGGCCAGCCGCGACAGGCTGGCACCTGAAGA
CGCCGAGCACAAAGCGCCGC

Downstream 100 bases:

>100_bases
CCGGCATCTCGGGCCGGATAGCTGACACACCGTTGTCAGGATGATCGGCCAGCCGCTCCCCGCGGCAGGCAAACCGCTAA
AGATTCTGACAGCCCGCCCC

Product: lysophospholipase L2

Products: NA

Alternate protein names: Lecithinase B [H]

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MTDLLHDTPLFHETEGNPRPENATGGFFITRDRKKIRYGLFAAVARPMRGTVVLLSGRNECIEKYFETIRDLAARGFGVA
TLDWRGQGDSDRLIRDRQRGYVRSFRDYTADLEQFFEEIVLPDCRGPYYILAHSAGAVIALLAAPSMVNRVRRMVLIAPF
LTLPDLPVSIRTVRRVCSVFCALGLGRLYAAWGPRPRHTLPFEANKVTSDPRRYRRNTRIYEEYPRMALGGPTIRWLQAA
AKASEAISDPDFMARIQVPLLIIAAGADRVVSTRAVEAYARSLRLGSLLMIDGSKHEILQEVDLYREQFLAAFDAFIPGS
DDPTA

Sequences:

>Translated_325_residues
MTDLLHDTPLFHETEGNPRPENATGGFFITRDRKKIRYGLFAAVARPMRGTVVLLSGRNECIEKYFETIRDLAARGFGVA
TLDWRGQGDSDRLIRDRQRGYVRSFRDYTADLEQFFEEIVLPDCRGPYYILAHSAGAVIALLAAPSMVNRVRRMVLIAPF
LTLPDLPVSIRTVRRVCSVFCALGLGRLYAAWGPRPRHTLPFEANKVTSDPRRYRRNTRIYEEYPRMALGGPTIRWLQAA
AKASEAISDPDFMARIQVPLLIIAAGADRVVSTRAVEAYARSLRLGSLLMIDGSKHEILQEVDLYREQFLAAFDAFIPGS
DDPTA
>Mature_324_residues
TDLLHDTPLFHETEGNPRPENATGGFFITRDRKKIRYGLFAAVARPMRGTVVLLSGRNECIEKYFETIRDLAARGFGVAT
LDWRGQGDSDRLIRDRQRGYVRSFRDYTADLEQFFEEIVLPDCRGPYYILAHSAGAVIALLAAPSMVNRVRRMVLIAPFL
TLPDLPVSIRTVRRVCSVFCALGLGRLYAAWGPRPRHTLPFEANKVTSDPRRYRRNTRIYEEYPRMALGGPTIRWLQAAA
KASEAISDPDFMARIQVPLLIIAAGADRVVSTRAVEAYARSLRLGSLLMIDGSKHEILQEVDLYREQFLAAFDAFIPGSD
DPTA

Specific function: Unknown

COG id: COG2267

COG function: function code I; Lysophospholipase

Gene ontology:

Cell location: Cell inner membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994980, Length=286, Percent_Identity=33.5664335664336, Blast_Score=115, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: =3.1.1.5 [H]

Molecular weight: Translated: 36609; Mature: 36477

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLLHDTPLFHETEGNPRPENATGGFFITRDRKKIRYGLFAAVARPMRGTVVLLSGRNE
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCHH
CIEKYFETIRDLAARGFGVATLDWRGQGDSDRLIRDRQRGYVRSFRDYTADLEQFFEEIV
HHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPDCRGPYYILAHSAGAVIALLAAPSMVNRVRRMVLIAPFLTLPDLPVSIRTVRRVCSVF
CCCCCCCEEEEEECCCHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
CALGLGRLYAAWGPRPRHTLPFEANKVTSDPRRYRRNTRIYEEYPRMALGGPTIRWLQAA
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHCCCHHCCCCHHHHHHHH
AKASEAISDPDFMARIQVPLLIIAAGADRVVSTRAVEAYARSLRLGSLLMIDGSKHEILQ
HHHHHHCCCCHHHHHEECCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHH
EVDLYREQFLAAFDAFIPGSDDPTA
HHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TDLLHDTPLFHETEGNPRPENATGGFFITRDRKKIRYGLFAAVARPMRGTVVLLSGRNE
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCHH
CIEKYFETIRDLAARGFGVATLDWRGQGDSDRLIRDRQRGYVRSFRDYTADLEQFFEEIV
HHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPDCRGPYYILAHSAGAVIALLAAPSMVNRVRRMVLIAPFLTLPDLPVSIRTVRRVCSVF
CCCCCCCEEEEEECCCHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
CALGLGRLYAAWGPRPRHTLPFEANKVTSDPRRYRRNTRIYEEYPRMALGGPTIRWLQAA
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHCCCHHCCCCHHHHHHHH
AKASEAISDPDFMARIQVPLLIIAAGADRVVSTRAVEAYARSLRLGSLLMIDGSKHEILQ
HHHHHHCCCCHHHHHEECCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHH
EVDLYREQFLAAFDAFIPGSDDPTA
HHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]