| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472667
Identifier: 13472667
GI number: 13472667
Start: 2443352
End: 2443621
Strand: Direct
Name: 13472667
Synonym: msr3035
Alternate gene names: NA
Gene position: 2443352-2443621 (Clockwise)
Preceding gene: 13472666
Following gene: 13472668
Centisome position: 34.73
GC content: 64.44
Gene sequence:
>270_bases ATGATCGGCCAGCCGCTCCCCGCGGCAGGCAAACCGCTAAAGATTCTGACAGCCCGCCCCCGCCCCGAAATGCTCATCTC AATGCGTCGAATTGAACGCCATGGAGATGAGATCATGACCGAGAAAACCTGCGCCGCCTGCGATTGCCAGCTGGATGCCA ACCCGATCCGCGTCAAGGTCGGCGGCAAGACCGTCGAGGTCTGCTGCGAGGAATGCGCGACGGCGCTGAACGAGGCCGGC GCCTCGGCGGCCGGCGTGAGCGAGGATTGA
Upstream 100 bases:
>100_bases GAACAATTCCTTGCCGCCTTCGACGCCTTCATCCCCGGCTCGGACGACCCGACGGCCTGACCGGCATCTCGGGCCGGATA GCTGACACACCGTTGTCAGG
Downstream 100 bases:
>100_bases GCCATGCGCACCGATCACGCAGTGGCGCAACGCCTGGCTGGCCAGGCTCCGGTGCCGCCAGTCCACACCGAAACCATCCT GCGAGCCTTGCACGCCCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 89
Protein sequence:
>89_residues MIGQPLPAAGKPLKILTARPRPEMLISMRRIERHGDEIMTEKTCAACDCQLDANPIRVKVGGKTVEVCCEECATALNEAG ASAAGVSED
Sequences:
>Translated_89_residues MIGQPLPAAGKPLKILTARPRPEMLISMRRIERHGDEIMTEKTCAACDCQLDANPIRVKVGGKTVEVCCEECATALNEAG ASAAGVSED >Mature_89_residues MIGQPLPAAGKPLKILTARPRPEMLISMRRIERHGDEIMTEKTCAACDCQLDANPIRVKVGGKTVEVCCEECATALNEAG ASAAGVSED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9439; Mature: 9439
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.7 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 11.2 %Cys+Met (Translated Protein) 6.7 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 11.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGQPLPAAGKPLKILTARPRPEMLISMRRIERHGDEIMTEKTCAACDCQLDANPIRVKV CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCEECCCCEEEEE GGKTVEVCCEECATALNEAGASAAGVSED CCCHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MIGQPLPAAGKPLKILTARPRPEMLISMRRIERHGDEIMTEKTCAACDCQLDANPIRVKV CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCEECCCCEEEEE GGKTVEVCCEECATALNEAGASAAGVSED CCCHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA