| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472624
Identifier: 13472624
GI number: 13472624
Start: 2393136
End: 2393945
Strand: Direct
Name: 13472624
Synonym: mlr2979
Alternate gene names: NA
Gene position: 2393136-2393945 (Clockwise)
Preceding gene: 13472623
Following gene: 13472625
Centisome position: 34.01
GC content: 58.64
Gene sequence:
>810_bases GTGACACGCTTTGGGGTTCGCGCGTGTCACTGTCCCAAAACCGCTGCGCACTTTTGGGTGACACGCACGGGCGGTCCCAA TTTCGCCCCCTTTCTGGTAACCTTCGGTTCCTCTCCAAAGCCAAGGGAATCGCGACCGGGAATGCAGCTCAAACGGCACG CAATCATACTGGCTTCGGCCCTGGCGGCGACCCTTGCCGCCACCAGACCGGCTTACGTGCATCCGCACGTCTTCGCCGAG GCACGCCTGGACGTCATCCTGTCCCCGGATCACCAAAGTGTGAAAGCGCTGCGTCATCTCTGGCGCTTCGACGACCTGTT TTCGAGTACGGTGATGATGGAGTTCGACAAGAACTCCGACCTGAAGCTTGACGACAAGGAGCTGAAGGAGGTCGCCGACA CCGTCCATGCCTCGCTGGCCGAATTCAACTATTTCCAACTCGTCACGCAGAACGGCAAGGACGTGACGATGGTGCCGCCT CCACATCTGATGGCCAATTTCGACAACGACCAGCTGATCATCCTGTTCGAGTCCGAGCCCAAGGTGCCGATCAAGCTGAC CGGCACGATCGACATCGGCGTCTATGATCCGACCTTCTACACGGCGATCGACTTCACCGAGGACTCCAACATCACGGTTG CAGGCCTGCCGTCGAATTGCACCAGCAAGGTGATCCGGCCGGACCCGGACGAGGCCATCAAGGAAAACCAGAAGACCCTG ACGGATGCCTTCTTCAACGACCCGACAGGCACCGACATGAGCAAGATCTTTGCCACCAAACTCGAACTGACCTGTCAGCC AGAAGGATGA
Upstream 100 bases:
>100_bases ACTTCCTGGTGCAATGGTTCAGGACGCGTGAGGTCGCTTGACCTGCCCAGGACTCTTGTGGCGTGCGTGTTGTAGGCGCA AAACCGCCGCGCACTTTTGG
Downstream 100 bases:
>100_bases AGCCGGTGACGAAACCGTCCCTGCGTTTGGCATTCGGCCTGTTGGCCCTCACCTTTGCCGCGATGCACTTCGCCAACGCC GCGCACGCCCAGTCCTCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MTRFGVRACHCPKTAAHFWVTRTGGPNFAPFLVTFGSSPKPRESRPGMQLKRHAIILASALAATLAATRPAYVHPHVFAE ARLDVILSPDHQSVKALRHLWRFDDLFSSTVMMEFDKNSDLKLDDKELKEVADTVHASLAEFNYFQLVTQNGKDVTMVPP PHLMANFDNDQLIILFESEPKVPIKLTGTIDIGVYDPTFYTAIDFTEDSNITVAGLPSNCTSKVIRPDPDEAIKENQKTL TDAFFNDPTGTDMSKIFATKLELTCQPEG
Sequences:
>Translated_269_residues MTRFGVRACHCPKTAAHFWVTRTGGPNFAPFLVTFGSSPKPRESRPGMQLKRHAIILASALAATLAATRPAYVHPHVFAE ARLDVILSPDHQSVKALRHLWRFDDLFSSTVMMEFDKNSDLKLDDKELKEVADTVHASLAEFNYFQLVTQNGKDVTMVPP PHLMANFDNDQLIILFESEPKVPIKLTGTIDIGVYDPTFYTAIDFTEDSNITVAGLPSNCTSKVIRPDPDEAIKENQKTL TDAFFNDPTGTDMSKIFATKLELTCQPEG >Mature_268_residues TRFGVRACHCPKTAAHFWVTRTGGPNFAPFLVTFGSSPKPRESRPGMQLKRHAIILASALAATLAATRPAYVHPHVFAEA RLDVILSPDHQSVKALRHLWRFDDLFSSTVMMEFDKNSDLKLDDKELKEVADTVHASLAEFNYFQLVTQNGKDVTMVPPP HLMANFDNDQLIILFESEPKVPIKLTGTIDIGVYDPTFYTAIDFTEDSNITVAGLPSNCTSKVIRPDPDEAIKENQKTLT DAFFNDPTGTDMSKIFATKLELTCQPEG
Specific function: Unknown
COG id: COG3683
COG function: function code R; ABC-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29927; Mature: 29796
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRFGVRACHCPKTAAHFWVTRTGGPNFAPFLVTFGSSPKPRESRPGMQLKRHAIILASA CCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH LAATLAATRPAYVHPHVFAEARLDVILSPDHQSVKALRHLWRFDDLFSSTVMMEFDKNSD HHHHHHHCCCCEECCEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCC LKLDDKELKEVADTVHASLAEFNYFQLVTQNGKDVTMVPPPHLMANFDNDQLIILFESEP CEECHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEECCCHHEEECCCCEEEEEECCCC KVPIKLTGTIDIGVYDPTFYTAIDFTEDSNITVAGLPSNCTSKVIRPDPDEAIKENQKTL CCCEEEEEEEEEEEECCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHH TDAFFNDPTGTDMSKIFATKLELTCQPEG HHHHCCCCCCCCHHHHHEEEEEEEECCCC >Mature Secondary Structure TRFGVRACHCPKTAAHFWVTRTGGPNFAPFLVTFGSSPKPRESRPGMQLKRHAIILASA CCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH LAATLAATRPAYVHPHVFAEARLDVILSPDHQSVKALRHLWRFDDLFSSTVMMEFDKNSD HHHHHHHCCCCEECCEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCC LKLDDKELKEVADTVHASLAEFNYFQLVTQNGKDVTMVPPPHLMANFDNDQLIILFESEP CEECHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEECCCHHEEECCCCEEEEEECCCC KVPIKLTGTIDIGVYDPTFYTAIDFTEDSNITVAGLPSNCTSKVIRPDPDEAIKENQKTL CCCEEEEEEEEEEEECCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHH TDAFFNDPTGTDMSKIFATKLELTCQPEG HHHHCCCCCCCCHHHHHEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA