Click here to switch to the map view.

The map label for this gene is 13472625

Identifier: 13472625

GI number: 13472625

Start: 2393942

End: 2395153

Strand: Direct

Name: 13472625

Synonym: mlr2980

Alternate gene names: NA

Gene position: 2393942-2395153 (Clockwise)

Preceding gene: 13472624

Following gene: 13472630

Centisome position: 34.02

GC content: 65.92

Gene sequence:

>1212_bases
ATGAAGCCGGTGACGAAACCGTCCCTGCGTTTGGCATTCGGCCTGTTGGCCCTCACCTTTGCCGCGATGCACTTCGCCAA
CGCCGCGCACGCCCAGTCCTCGCTCGGCATCGGCGTCAATGACGGCATGGCGCCCACCACCGGTCCGTTCGCCCACATCC
TGATGTGGATCAACCTCAGACAGCAGGAATTCTACCGGGCGCTGGCGACGGCGATGAAGGCGATGCGCCAGGACAACAGC
AAGCTCTGGGTGCTCATCGGCCTGTCCTTCGCCTATGGCATCTTCCATGCCGCCGGCCCCGGCCACGGCAAGGCGGTGAT
CTCGTCCTACATGGTTGCCAATGAAGTGGCGCTCAAGCGCGGCATCCTGTTGTCCTTCGTCTCGGCCCTGCTCCAGGGCC
TGACCGCGATCGCGGTCATGCTGGTTGCCTATTTCGTCCTGCGCGGCACCACCATCTCGATGACCGACGCGGCCTGGTTC
ATGGAGATCATGAGCTTTGCCCTCGTCACCCTGTTCGGCGCCTGGCTGCTGTGGCGCAAGCTCGGCCCGTCGATCCTGCG
CCTGTTCGGCAGGGCGCCCGCCTACAGCCTGTCGGCGGCGCACGCCGGCCATTCGCATGGGGGTCACGCGACTCATTCCC
ACGCTGGTCATTCGCATGCCGCGCACAGCCTTTCGGCGCATGCGCATTCGCACGCGGTACATGGGCATGACGACCACGAC
CATGACCATTCGCACAACCATCACGACCACGCCGCGCATGACCACCATCACGACCATGGCACGCATGCTCATCATGACCA
TGCGCATCACGATCACGCGGCGGGCGAGGTCTGCGAAACCTGCGGCCACTCGCATGCGCCCGATCCGGCGCTGCTGTCGG
GCGACCGTTTCGACTGGCGCACCGCCTGGTCGGCGGTGGCCGCCGTCGGCATACGCCCCTGCTCCGGCGCGCTGATCGTG
CTGAGCTTCGCGCTGCTCAACGGGCTCTGGCTCGGCGGCCTGCTGTCGGTGCTTGCGATGTCGCTGGGCACAGCCATCAC
CGTCTCGGCGCTGGCAACGCTTGCCGTGACCGCCAAGAACTGGGCGGTGTATTTCGCCGGTGACGGCCGCATGGGCAACC
GCATCCATTCGATCGTCGAGATCGGCGGCGCCGCCTTCGTCTTCTTGTTCGGACTGCTGCTGCTGTCGGCGAGCCTGACC
GGCAGCGTCTAG

Upstream 100 bases:

>100_bases
ACCAGAAGACCCTGACGGATGCCTTCTTCAACGACCCGACAGGCACCGACATGAGCAAGATCTTTGCCACCAAACTCGAA
CTGACCTGTCAGCCAGAAGG

Downstream 100 bases:

>100_bases
GCCTGTCTTACCCCATTGAAATGGGATGGCGCCGGTAAACTCCTACCCAGGAAGCTGGCCATCCAACTCATCCTCGATAT
GCGCGCGGATGATCTCGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MKPVTKPSLRLAFGLLALTFAAMHFANAAHAQSSLGIGVNDGMAPTTGPFAHILMWINLRQQEFYRALATAMKAMRQDNS
KLWVLIGLSFAYGIFHAAGPGHGKAVISSYMVANEVALKRGILLSFVSALLQGLTAIAVMLVAYFVLRGTTISMTDAAWF
MEIMSFALVTLFGAWLLWRKLGPSILRLFGRAPAYSLSAAHAGHSHGGHATHSHAGHSHAAHSLSAHAHSHAVHGHDDHD
HDHSHNHHDHAAHDHHHDHGTHAHHDHAHHDHAAGEVCETCGHSHAPDPALLSGDRFDWRTAWSAVAAVGIRPCSGALIV
LSFALLNGLWLGGLLSVLAMSLGTAITVSALATLAVTAKNWAVYFAGDGRMGNRIHSIVEIGGAAFVFLFGLLLLSASLT
GSV

Sequences:

>Translated_403_residues
MKPVTKPSLRLAFGLLALTFAAMHFANAAHAQSSLGIGVNDGMAPTTGPFAHILMWINLRQQEFYRALATAMKAMRQDNS
KLWVLIGLSFAYGIFHAAGPGHGKAVISSYMVANEVALKRGILLSFVSALLQGLTAIAVMLVAYFVLRGTTISMTDAAWF
MEIMSFALVTLFGAWLLWRKLGPSILRLFGRAPAYSLSAAHAGHSHGGHATHSHAGHSHAAHSLSAHAHSHAVHGHDDHD
HDHSHNHHDHAAHDHHHDHGTHAHHDHAHHDHAAGEVCETCGHSHAPDPALLSGDRFDWRTAWSAVAAVGIRPCSGALIV
LSFALLNGLWLGGLLSVLAMSLGTAITVSALATLAVTAKNWAVYFAGDGRMGNRIHSIVEIGGAAFVFLFGLLLLSASLT
GSV
>Mature_403_residues
MKPVTKPSLRLAFGLLALTFAAMHFANAAHAQSSLGIGVNDGMAPTTGPFAHILMWINLRQQEFYRALATAMKAMRQDNS
KLWVLIGLSFAYGIFHAAGPGHGKAVISSYMVANEVALKRGILLSFVSALLQGLTAIAVMLVAYFVLRGTTISMTDAAWF
MEIMSFALVTLFGAWLLWRKLGPSILRLFGRAPAYSLSAAHAGHSHGGHATHSHAGHSHAAHSLSAHAHSHAVHGHDDHD
HDHSHNHHDHAAHDHHHDHGTHAHHDHAHHDHAAGEVCETCGHSHAPDPALLSGDRFDWRTAWSAVAAVGIRPCSGALIV
LSFALLNGLWLGGLLSVLAMSLGTAITVSALATLAVTAKNWAVYFAGDGRMGNRIHSIVEIGGAAFVFLFGLLLLSASLT
GSV

Specific function: Efflux system for nickel and cobalt (Potential) [H]

COG id: COG2215

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NiCoT transporter (TC 2.A.52) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011541 [H]

Pfam domain/function: PF03824 NicO [H]

EC number: NA

Molecular weight: Translated: 42906; Mature: 42906

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]