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The map label for this gene is flgD [H]

Identifier: 13472597

GI number: 13472597

Start: 2366818

End: 2367225

Strand: Direct

Name: flgD [H]

Synonym: mlr2942

Alternate gene names: 13472597

Gene position: 2366818-2367225 (Clockwise)

Preceding gene: 13472596

Following gene: 13472598

Centisome position: 33.64

GC content: 61.03

Gene sequence:

>408_bases
ATGACCGTGGACATGACGACGACGATACCGGTCGGTGCCAATTCGACCACCAAGTCGACCTCGAAGACAGCGGTCGACTA
CCAGTCTTTCCTGAAGCTTCTGATTGCCGAGATGAAGAACCAGGATCCGACCAAGCCGATGGATTCGACGCAGTACGTCG
CCCAGCTCGCCACCTTCTCGCAGGTCGAGCAATCGGTGCAGAGCAACACCAAACTCGACCAGATCATGCAGTCCTCGGCG
CTGTCGCAGGCCGATGCGATCATCGGCCGCTCGATCACGTCGGCCGACGGCAAGACCACCGGAATAGTGGCTTCGGTGAC
GCTCGCCAGCAGCGGACTGATCGCAGTGTTGCAGGATGGCACCAAGGTCCCCGTCGGCCCGGGCGTGTCGATCAAGCCGG
CAAGCTAG

Upstream 100 bases:

>100_bases
AGGCGATCCGTTCGCTCTATCCTCTCGAACGCCGCGCGCTTGGCGGCAATGACGATGTTCCGGGCGCCCCGCGCCCGCTG
GCCGTGGGAGCACGCTACTG

Downstream 100 bases:

>100_bases
GCCAACCGCCCGCATGAACGAGGCCGACGCTCTCGACATCGTCCAGTACGCGGTGTGGACGGTGCTGACGGCGTCCGCTC
CGGTGGTGCTGGTCGCCATG

Product: flagellar basal body rod modification protein

Products: NA

Alternate protein names: ORF 8 [H]

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MTVDMTTTIPVGANSTTKSTSKTAVDYQSFLKLLIAEMKNQDPTKPMDSTQYVAQLATFSQVEQSVQSNTKLDQIMQSSA
LSQADAIIGRSITSADGKTTGIVASVTLASSGLIAVLQDGTKVPVGPGVSIKPAS

Sequences:

>Translated_135_residues
MTVDMTTTIPVGANSTTKSTSKTAVDYQSFLKLLIAEMKNQDPTKPMDSTQYVAQLATFSQVEQSVQSNTKLDQIMQSSA
LSQADAIIGRSITSADGKTTGIVASVTLASSGLIAVLQDGTKVPVGPGVSIKPAS
>Mature_134_residues
TVDMTTTIPVGANSTTKSTSKTAVDYQSFLKLLIAEMKNQDPTKPMDSTQYVAQLATFSQVEQSVQSNTKLDQIMQSSAL
SQADAIIGRSITSADGKTTGIVASVTLASSGLIAVLQDGTKVPVGPGVSIKPAS

Specific function: Required For Flagellar Hook Formation. May Act As A Scaffolding Protein. [C]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgD family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005648 [H]

Pfam domain/function: PF03963 FlgD [H]

EC number: NA

Molecular weight: Translated: 14011; Mature: 13880

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVDMTTTIPVGANSTTKSTSKTAVDYQSFLKLLIAEMKNQDPTKPMDSTQYVAQLATFS
CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
QVEQSVQSNTKLDQIMQSSALSQADAIIGRSITSADGKTTGIVASVTLASSGLIAVLQDG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEECCC
TKVPVGPGVSIKPAS
CCCCCCCCCEECCCC
>Mature Secondary Structure 
TVDMTTTIPVGANSTTKSTSKTAVDYQSFLKLLIAEMKNQDPTKPMDSTQYVAQLATFS
CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
QVEQSVQSNTKLDQIMQSSALSQADAIIGRSITSADGKTTGIVASVTLASSGLIAVLQDG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEECCC
TKVPVGPGVSIKPAS
CCCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1828465; 9384377 [H]