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The map label for this gene is fliQ [H]

Identifier: 13472598

GI number: 13472598

Start: 2367239

End: 2367505

Strand: Direct

Name: fliQ [H]

Synonym: msr2943

Alternate gene names: 13472598

Gene position: 2367239-2367505 (Clockwise)

Preceding gene: 13472597

Following gene: 13472599

Centisome position: 33.64

GC content: 63.67

Gene sequence:

>267_bases
ATGAACGAGGCCGACGCTCTCGACATCGTCCAGTACGCGGTGTGGACGGTGCTGACGGCGTCCGCTCCGGTGGTGCTGGT
CGCCATGGCGGTCGGCATCGGCATCGCCCTCATCCAGGCGCTGACGCAGATCCAGGAAATCACCCTGACCTTCGTGCCGA
AGATCGTCGCCATCATGCTGGTGGTGGCGCTCACCGGCCCGTTCATCGGCGGCCAGATATCGGCCTTCACCAACGTCATC
TTCCAGCGCATCCAGAACGGGTTCTGA

Upstream 100 bases:

>100_bases
CTCGCCAGCAGCGGACTGATCGCAGTGTTGCAGGATGGCACCAAGGTCCCCGTCGGCCCGGGCGTGTCGATCAAGCCGGC
AAGCTAGGCCAACCGCCCGC

Downstream 100 bases:

>100_bases
AGAAAGTCGCGGAAAGGCACATTCCGCTTCAGAACGTGAAGGCTCGCAAGAACGGCTCCTGATATCGGCCGATTTCACCG
CGAGCATGCAAGGCATGCTG

Product: flagellar biosynthesis protein FliQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MNEADALDIVQYAVWTVLTASAPVVLVAMAVGIGIALIQALTQIQEITLTFVPKIVAIMLVVALTGPFIGGQISAFTNVI
FQRIQNGF

Sequences:

>Translated_88_residues
MNEADALDIVQYAVWTVLTASAPVVLVAMAVGIGIALIQALTQIQEITLTFVPKIVAIMLVVALTGPFIGGQISAFTNVI
FQRIQNGF
>Mature_88_residues
MNEADALDIVQYAVWTVLTASAPVVLVAMAVGIGIALIQALTQIQEITLTFVPKIVAIMLVVALTGPFIGGQISAFTNVI
FQRIQNGF

Specific function: Component of the Yop secretion machinery [H]

COG id: COG1987

COG function: function code NU; Flagellar biosynthesis pathway, component FliQ

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliQ/MopD/SpaQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002191
- InterPro:   IPR006306 [H]

Pfam domain/function: PF01313 Bac_export_3 [H]

EC number: NA

Molecular weight: Translated: 9330; Mature: 9330

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEADALDIVQYAVWTVLTASAPVVLVAMAVGIGIALIQALTQIQEITLTFVPKIVAIML
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVALTGPFIGGQISAFTNVIFQRIQNGF
HHHHHCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNEADALDIVQYAVWTVLTASAPVVLVAMAVGIGIALIQALTQIQEITLTFVPKIVAIML
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVALTGPFIGGQISAFTNVIFQRIQNGF
HHHHHCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8300512; 9746557; 9748454; 11586360 [H]