| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is motB [H]
Identifier: 13472587
GI number: 13472587
Start: 2356579
End: 2357994
Strand: Direct
Name: motB [H]
Synonym: mlr2931
Alternate gene names: 13472587
Gene position: 2356579-2357994 (Clockwise)
Preceding gene: 13472586
Following gene: 13472588
Centisome position: 33.49
GC content: 66.88
Gene sequence:
>1416_bases ATGGTCGGCGACCCTTTCCGAGGTCCTGTCATGAGTGTCGTCGACGCCGATCACGGCAGGCACGAGATCATCATCGTGCG GCGGGCACATGACGACCACGATGAGGGCCATCACGGCGGCGTCTGGAAGATCGCCTTCGCCGACTTCATGACCGCCATGA TGTGCTTCTTCCTGGTCATGTGGCTGATCAACGCCGCCAACGAACAGACCAAGGCGGCCGTCGCCAGCTACTTCAACCCG GTCAAGCTGGTCGACCGCAATTCGAGTCGCAAGGGGCTGGAGGATCTGGGCGACGGGCCAAGCGCCATTGGCTCGACGGC CGACAAACCGCAACAGACGAAGGCCAAACCCGGCCAGGCTGGCAGCGGTGACGCGGGCTCATCCGACGCCAAGAAGGACA AGCAACAGCCGCAACAAACCGACGATCACCTCTTCGCCGACCCCTATGCGGTGCTTTCCGAAATCGCCACCGACACCGGC GTCATGCAGAATGTCAGCCAGAAGGGCGATGGCGGCGCGCAGAGCGCCGGGCCGGCCACGGGCGCCTCGGGCGGCGCGTC CTACCGCGATCCTTTCGAACCGGATTTCTGGTCGCAGCAGGTGGCCGCGCCCGCCGCCGAGGCGAGTGCCCAGCGCCCCA AGATCGAGGGCGATCCGCTCAAACCAGGCGACAAGGCCGCGGAGAGTCAGGTCGCCAAGGTCAAGGCCGTGCCGCCGGCG CCGCCCGTCAAGGATGCACCGCTCGAGCCCCTGGCCGAGAGTGGCAAGGACGCCGCCGCGACGATGGCCAAGGCCGGCGA AACCAAGGCCAGCGGAGCCAAGGCCAGCGACGCCAAGACCGGAGATGCCAAGACTGAAGACAGCAAGGCCGTGGCTGCCG CCAAGGCGGATACCGCAGCCGCCGCGCAAGAGACGGCAGCGCCTGAAGCCGGGGAGAAGCCGCCGACCGCCGCTGCCGTG AAGGCGGCTGCCGATGTCAAGCAGCAGCTGGCCGATGCCTTCAAGCCCGGCGACAAGCTGCATGACGGCGTTTCGGTCGA AGCCACCGACAAGGGCGTCGTCATCTCAATCACCGATCAGCTCGACTTCGGCATGTTCGAAGTCGGATCGGCGGTGCCAA GCCGCGAACTGGTGCTGGCGATGGAAAAGATCGGCCGCATCGTCAACAGCCAGAAGGGCACCATCAGCATCAACGGCCAC ACCGATGCCCGCCCCTTCCGCAGCGCCAGCTACGACAATTGGCGGCTGTCGACGGCGCGCGCGCATTCCGCCTACTACAT GCTCGTGCGCGGCGGCGTCGACGAGCGCCGCATCACCGAGGTCGCCGGCTTCGCCGACCGCCAGCCGAAGGATCCGGCCG ATCCCCTGTCGGCGGCCAACCGCCGCATCGAGATCCTGATGGCGACCGGCGGATGA
Upstream 100 bases:
>100_bases CGCTTGGACCACGCGCTGCAAATCTCGACTTCATCGAGGCGCCAGGTTTCGACTTGACCGTGACCATTGACGAGGCCGTG TTCGAGACGCGCATTGCCGA
Downstream 100 bases:
>100_bases ACCGGGCGGCCGTCACCAGCCGGCTGATGGGCCTGTTGCTGCTGGCAGCCGGATATCCGTCGGCCGGCTTCGCCCAGGAC ACGCTGCAGCCCTACCAGCT
Product: flagellar motor protein MotB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 471; Mature: 471
Protein sequence:
>471_residues MVGDPFRGPVMSVVDADHGRHEIIIVRRAHDDHDEGHHGGVWKIAFADFMTAMMCFFLVMWLINAANEQTKAAVASYFNP VKLVDRNSSRKGLEDLGDGPSAIGSTADKPQQTKAKPGQAGSGDAGSSDAKKDKQQPQQTDDHLFADPYAVLSEIATDTG VMQNVSQKGDGGAQSAGPATGASGGASYRDPFEPDFWSQQVAAPAAEASAQRPKIEGDPLKPGDKAAESQVAKVKAVPPA PPVKDAPLEPLAESGKDAAATMAKAGETKASGAKASDAKTGDAKTEDSKAVAAAKADTAAAAQETAAPEAGEKPPTAAAV KAAADVKQQLADAFKPGDKLHDGVSVEATDKGVVISITDQLDFGMFEVGSAVPSRELVLAMEKIGRIVNSQKGTISINGH TDARPFRSASYDNWRLSTARAHSAYYMLVRGGVDERRITEVAGFADRQPKDPADPLSAANRRIEILMATGG
Sequences:
>Translated_471_residues MVGDPFRGPVMSVVDADHGRHEIIIVRRAHDDHDEGHHGGVWKIAFADFMTAMMCFFLVMWLINAANEQTKAAVASYFNP VKLVDRNSSRKGLEDLGDGPSAIGSTADKPQQTKAKPGQAGSGDAGSSDAKKDKQQPQQTDDHLFADPYAVLSEIATDTG VMQNVSQKGDGGAQSAGPATGASGGASYRDPFEPDFWSQQVAAPAAEASAQRPKIEGDPLKPGDKAAESQVAKVKAVPPA PPVKDAPLEPLAESGKDAAATMAKAGETKASGAKASDAKTGDAKTEDSKAVAAAKADTAAAAQETAAPEAGEKPPTAAAV KAAADVKQQLADAFKPGDKLHDGVSVEATDKGVVISITDQLDFGMFEVGSAVPSRELVLAMEKIGRIVNSQKGTISINGH TDARPFRSASYDNWRLSTARAHSAYYMLVRGGVDERRITEVAGFADRQPKDPADPLSAANRRIEILMATGG >Mature_471_residues MVGDPFRGPVMSVVDADHGRHEIIIVRRAHDDHDEGHHGGVWKIAFADFMTAMMCFFLVMWLINAANEQTKAAVASYFNP VKLVDRNSSRKGLEDLGDGPSAIGSTADKPQQTKAKPGQAGSGDAGSSDAKKDKQQPQQTDDHLFADPYAVLSEIATDTG VMQNVSQKGDGGAQSAGPATGASGGASYRDPFEPDFWSQQVAAPAAEASAQRPKIEGDPLKPGDKAAESQVAKVKAVPPA PPVKDAPLEPLAESGKDAAATMAKAGETKASGAKASDAKTGDAKTEDSKAVAAAKADTAAAAQETAAPEAGEKPPTAAAV KAAADVKQQLADAFKPGDKLHDGVSVEATDKGVVISITDQLDFGMFEVGSAVPSRELVLAMEKIGRIVNSQKGTISINGH TDARPFRSASYDNWRLSTARAHSAYYMLVRGGVDERRITEVAGFADRQPKDPADPLSAANRRIEILMATGG
Specific function: Not Known. [C]
COG id: COG1360
COG function: function code N; Flagellar motor protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 OmpA-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788198, Length=59, Percent_Identity=54.2372881355932, Blast_Score=69, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006665 [H]
Pfam domain/function: PF00691 OmpA [H]
EC number: NA
Molecular weight: Translated: 49178; Mature: 49178
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: PS51123 OMPA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGDPFRGPVMSVVDADHGRHEIIIVRRAHDDHDEGHHGGVWKIAFADFMTAMMCFFLVM CCCCCCCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHH WLINAANEQTKAAVASYFNPVKLVDRNSSRKGLEDLGDGPSAIGSTADKPQQTKAKPGQA HHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHCCCHHHHCCCCCCCCHHCCCCCCC GSGDAGSSDAKKDKQQPQQTDDHLFADPYAVLSEIATDTGVMQNVSQKGDGGAQSAGPAT CCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GASGGASYRDPFEPDFWSQQVAAPAAEASAQRPKIEGDPLKPGDKAAESQVAKVKAVPPA CCCCCCCCCCCCCCCHHHHHHHCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHEECCCCC PPVKDAPLEPLAESGKDAAATMAKAGETKASGAKASDAKTGDAKTEDSKAVAAAKADTAA CCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH AAQETAAPEAGEKPPTAAAVKAAADVKQQLADAFKPGDKLHDGVSVEATDKGVVISITDQ HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEECCCCEEEEECCC LDFGMFEVGSAVPSRELVLAMEKIGRIVNSQKGTISINGHTDARPFRSASYDNWRLSTAR CCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEHHH AHSAYYMLVRGGVDERRITEVAGFADRQPKDPADPLSAANRRIEILMATGG HCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCEEEEEEECCC >Mature Secondary Structure MVGDPFRGPVMSVVDADHGRHEIIIVRRAHDDHDEGHHGGVWKIAFADFMTAMMCFFLVM CCCCCCCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHH WLINAANEQTKAAVASYFNPVKLVDRNSSRKGLEDLGDGPSAIGSTADKPQQTKAKPGQA HHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHCCCHHHHCCCCCCCCHHCCCCCCC GSGDAGSSDAKKDKQQPQQTDDHLFADPYAVLSEIATDTGVMQNVSQKGDGGAQSAGPAT CCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GASGGASYRDPFEPDFWSQQVAAPAAEASAQRPKIEGDPLKPGDKAAESQVAKVKAVPPA CCCCCCCCCCCCCCCHHHHHHHCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHEECCCCC PPVKDAPLEPLAESGKDAAATMAKAGETKASGAKASDAKTGDAKTEDSKAVAAAKADTAA CCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH AAQETAAPEAGEKPPTAAAVKAAADVKQQLADAFKPGDKLHDGVSVEATDKGVVISITDQ HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEECCCCEEEEECCC LDFGMFEVGSAVPSRELVLAMEKIGRIVNSQKGTISINGHTDARPFRSASYDNWRLSTAR CCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEHHH AHSAYYMLVRGGVDERRITEVAGFADRQPKDPADPLSAANRRIEILMATGG HCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7596361; 9278503 [H]