Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13472588

Identifier: 13472588

GI number: 13472588

Start: 2358696

End: 2359364

Strand: Direct

Name: 13472588

Synonym: mlr2932

Alternate gene names: NA

Gene position: 2358696-2359364 (Clockwise)

Preceding gene: 13472587

Following gene: 13472589

Centisome position: 33.52

GC content: 68.91

Gene sequence:

>669_bases
ATGTCGATCAGCCAGGACAAGCTCGCCGACATCACCTCGATGATGGATCCCGAGCGCGAGAAGGTAATCTATCTGCGCAT
CGCCCGCCGCGCCGCGATCGACGGCCTCAGCGAATTGTCGGCCTTTGCCTCAGCGCGGGCCGAGCAGGGCCGCGACGGCA
ACACCAATCAGGGCGATCCGCGCGCCGAGCTTTACTCGAGCCTGTCCACGGTGACTTCCGGTACGATCGAGGATGTCCGC
ACCAAGCTCGGCAAGATCGACCGCAGCAAACTGTCGGACGGTGACCGTGCCTTGCTCGACGCCGCCCAGGCGATCGCCGG
TGAGGTGGTGGCGCCGCCTGCTTCCCTTCCGGGCGCGACTCCGGCGTCTGCAGCCCTTGCACCGCAGCCCAAACCTGAGG
TCGCCATCGCGCAGCCTGCCGACGCGGCCGGATTGCCGCCCGTCGAGGGTGCCGTCTCCGAACGGCCTGCCGCCTCGCCA
TCCGGCGGGACGGTGGCCGCCGCACCGGGCGCGCCGGCGCCTTCCGCCGATTCGGCGGCGGTCCTACCGGCATCGGCGCC
AGCAAACTCTGCCGGTCCCGACACGACCGATCCGACCGACGCCGCCATGATGAAAACCCGTCGACAGCTCGACCTGATCG
ACCAGATGCTCGGAGCCGCCCCGAAATGA

Upstream 100 bases:

>100_bases
ATTCGCGCGTGCCTCCACCCAATATGTCGAGCGCTATCTCTATTCGCCCTATGCCAGCCAGTTCGCCGATTCCTTCGTCT
CCGGCGTCATCACGCTGCAT

Downstream 100 bases:

>100_bases
CCCCAAGCCTCGGCCCGGCCCTGCCAGGATTTACCGCCGCCCGCACGGCGGAGCAGCCGGCTACTCCCGGCAAGAAGGAT
GATGCTGGTTTCGGCAAGAT

Product: chemotaxis MOTC protein

Products: NA

Alternate protein names: Chemotaxis MOTC Protein

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSISQDKLADITSMMDPEREKVIYLRIARRAAIDGLSELSAFASARAEQGRDGNTNQGDPRAELYSSLSTVTSGTIEDVR
TKLGKIDRSKLSDGDRALLDAAQAIAGEVVAPPASLPGATPASAALAPQPKPEVAIAQPADAAGLPPVEGAVSERPAASP
SGGTVAAAPGAPAPSADSAAVLPASAPANSAGPDTTDPTDAAMMKTRRQLDLIDQMLGAAPK

Sequences:

>Translated_222_residues
MSISQDKLADITSMMDPEREKVIYLRIARRAAIDGLSELSAFASARAEQGRDGNTNQGDPRAELYSSLSTVTSGTIEDVR
TKLGKIDRSKLSDGDRALLDAAQAIAGEVVAPPASLPGATPASAALAPQPKPEVAIAQPADAAGLPPVEGAVSERPAASP
SGGTVAAAPGAPAPSADSAAVLPASAPANSAGPDTTDPTDAAMMKTRRQLDLIDQMLGAAPK
>Mature_221_residues
SISQDKLADITSMMDPEREKVIYLRIARRAAIDGLSELSAFASARAEQGRDGNTNQGDPRAELYSSLSTVTSGTIEDVRT
KLGKIDRSKLSDGDRALLDAAQAIAGEVVAPPASLPGATPASAALAPQPKPEVAIAQPADAAGLPPVEGAVSERPAASPS
GGTVAAAPGAPAPSADSAAVLPASAPANSAGPDTTDPTDAAMMKTRRQLDLIDQMLGAAPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22401; Mature: 22270

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISQDKLADITSMMDPEREKVIYLRIARRAAIDGLSELSAFASARAEQGRDGNTNQGDP
CCCCHHHHHHHHHHCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
RAELYSSLSTVTSGTIEDVRTKLGKIDRSKLSDGDRALLDAAQAIAGEVVAPPASLPGAT
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
PASAALAPQPKPEVAIAQPADAAGLPPVEGAVSERPAASPSGGTVAAAPGAPAPSADSAA
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCE
VLPASAPANSAGPDTTDPTDAAMMKTRRQLDLIDQMLGAAPK
ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SISQDKLADITSMMDPEREKVIYLRIARRAAIDGLSELSAFASARAEQGRDGNTNQGDP
CCCHHHHHHHHHHCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
RAELYSSLSTVTSGTIEDVRTKLGKIDRSKLSDGDRALLDAAQAIAGEVVAPPASLPGAT
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
PASAALAPQPKPEVAIAQPADAAGLPPVEGAVSERPAASPSGGTVAAAPGAPAPSADSAA
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCE
VLPASAPANSAGPDTTDPTDAAMMKTRRQLDLIDQMLGAAPK
ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA