Click here to switch to the map view.

The map label for this gene is fliM [H]

Identifier: 13472567

GI number: 13472567

Start: 2339258

End: 2340205

Strand: Reverse

Name: fliM [H]

Synonym: mll2904

Alternate gene names: 13472567

Gene position: 2340205-2339258 (Counterclockwise)

Preceding gene: 13472568

Following gene: 13472566

Centisome position: 33.26

GC content: 66.98

Gene sequence:

>948_bases
ATGACCAGCCCAGGCAGCCCCGCACAAGCGCGCTCGCTGATCATCGAGCGCCTGGTCGGCGACAGCGGCGAGGCCGCCCA
GGTCATCGGTACTGGCCGCGGCATGGCCGAGCGCGCCGCGCCGCTGCTGCAAAAGAGCCTGACCAGTGAGCTTGGCGTTC
CGGTCACCGTCGATCTCAGGGCCGTCGAGGTCAGCCGCGTCGCGGAGGCGCGCTCGCGTGCCGGCGATACGTTTGCCATG
ACTATCGTGGCATCATCCACGTCCTCCGATGCCATGACCCTGGTGATCGACGCGCCGGCGATAGCGATCATGGTCTGCAC
GCTGTTCGGCGGCGACCCGGAGACGCCGGCATCGCCGATCGAGCGCGATCTGTCGCAGATCGAGGTTGATGTCTCGACCA
TGCTGTTTCAGCAGGTCGCGCAGGCTCTGAACGGATCGGGGCGGCGTTCGCTCGACCTGCGTCTGCCCGTACCGCGCGCG
ATGTCGGGCACCGAAGCCAAGCGGCACGTTTTGCGAGATGGTGCGGCACTGCGCATCGTTCTTGGCATCTCGACGCCAGC
CGACAGCGGCACTGTCACGGTGACGATGCCGCAGCGTATCGTGCTGGCCAGCCGCGACAGTGCCGCGAGCACCGCCGGGG
ACGACCACGGCCCGAGTTGGCGGGAGCGCTTCTCGGAAGAGGTGATGCGCTCGACGGTGGCGCTCGAAGCCACCATGCCG
CTGGCGCGGCTGACGCTTGGCGACCTCGCCAGTCTCGAAGTGGGCCAGGTCATCGACTTCGACGAAACGGCGCAATCAAG
GGCACGCCTCAGCGCGCGCGGCCAGACGCTGTTCGTATGCGAGTTCGGCAAACTGGGGCAGAATTACACCGTCCGAATCA
GGCATCCTTTTGATGCCGGGCAGGATTTCATCGATGGGCTCATGCCGGCCAGTGCCGGGCGCGCCTGA

Upstream 100 bases:

>100_bases
GGCCGACCATCGACGCCGTCGAGCAGAGCACGATGAACACCGGCAGCGCCGAGAAGAAGGCCGCTTGAGCGATGCACGAC
AGATCGGTGCCGACACGGCC

Downstream 100 bases:

>100_bases
GCTTTTGGAGACGATTCATGGCCAAGACCAAAGTGGAAGCAGAGATCGACCAGCCGGACGAGCAGCTCGATCGCGCCATC
GAGGAATTGCGCGGGGTCCT

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MTSPGSPAQARSLIIERLVGDSGEAAQVIGTGRGMAERAAPLLQKSLTSELGVPVTVDLRAVEVSRVAEARSRAGDTFAM
TIVASSTSSDAMTLVIDAPAIAIMVCTLFGGDPETPASPIERDLSQIEVDVSTMLFQQVAQALNGSGRRSLDLRLPVPRA
MSGTEAKRHVLRDGAALRIVLGISTPADSGTVTVTMPQRIVLASRDSAASTAGDDHGPSWRERFSEEVMRSTVALEATMP
LARLTLGDLASLEVGQVIDFDETAQSRARLSARGQTLFVCEFGKLGQNYTVRIRHPFDAGQDFIDGLMPASAGRA

Sequences:

>Translated_315_residues
MTSPGSPAQARSLIIERLVGDSGEAAQVIGTGRGMAERAAPLLQKSLTSELGVPVTVDLRAVEVSRVAEARSRAGDTFAM
TIVASSTSSDAMTLVIDAPAIAIMVCTLFGGDPETPASPIERDLSQIEVDVSTMLFQQVAQALNGSGRRSLDLRLPVPRA
MSGTEAKRHVLRDGAALRIVLGISTPADSGTVTVTMPQRIVLASRDSAASTAGDDHGPSWRERFSEEVMRSTVALEATMP
LARLTLGDLASLEVGQVIDFDETAQSRARLSARGQTLFVCEFGKLGQNYTVRIRHPFDAGQDFIDGLMPASAGRA
>Mature_314_residues
TSPGSPAQARSLIIERLVGDSGEAAQVIGTGRGMAERAAPLLQKSLTSELGVPVTVDLRAVEVSRVAEARSRAGDTFAMT
IVASSTSSDAMTLVIDAPAIAIMVCTLFGGDPETPASPIERDLSQIEVDVSTMLFQQVAQALNGSGRRSLDLRLPVPRAM
SGTEAKRHVLRDGAALRIVLGISTPADSGTVTVTMPQRIVLASRDSAASTAGDDHGPSWRERFSEEVMRSTVALEATMPL
ARLTLGDLASLEVGQVIDFDETAQSRARLSARGQTLFVCEFGKLGQNYTVRIRHPFDAGQDFIDGLMPASAGRA

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001543 [H]

Pfam domain/function: PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 33276; Mature: 33145

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPGSPAQARSLIIERLVGDSGEAAQVIGTGRGMAERAAPLLQKSLTSELGVPVTVDLR
CCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEE
AVEVSRVAEARSRAGDTFAMTIVASSTSSDAMTLVIDAPAIAIMVCTLFGGDPETPASPI
HHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCHH
ERDLSQIEVDVSTMLFQQVAQALNGSGRRSLDLRLPVPRAMSGTEAKRHVLRDGAALRIV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCEEEEE
LGISTPADSGTVTVTMPQRIVLASRDSAASTAGDDHGPSWRERFSEEVMRSTVALEATMP
EEECCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
LARLTLGDLASLEVGQVIDFDETAQSRARLSARGQTLFVCEFGKLGQNYTVRIRHPFDAG
HHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCCC
QDFIDGLMPASAGRA
HHHHHHHCCCCCCCC
>Mature Secondary Structure 
TSPGSPAQARSLIIERLVGDSGEAAQVIGTGRGMAERAAPLLQKSLTSELGVPVTVDLR
CCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEE
AVEVSRVAEARSRAGDTFAMTIVASSTSSDAMTLVIDAPAIAIMVCTLFGGDPETPASPI
HHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCHH
ERDLSQIEVDVSTMLFQQVAQALNGSGRRSLDLRLPVPRAMSGTEAKRHVLRDGAALRIV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCEEEEE
LGISTPADSGTVTVTMPQRIVLASRDSAASTAGDDHGPSWRERFSEEVMRSTVALEATMP
EEECCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
LARLTLGDLASLEVGQVIDFDETAQSRARLSARGQTLFVCEFGKLGQNYTVRIRHPFDAG
HHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCCC
QDFIDGLMPASAGRA
HHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9858749; 11481430 [H]