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The map label for this gene is fliN [H]

Identifier: 13472566

GI number: 13472566

Start: 2338854

End: 2339240

Strand: Reverse

Name: fliN [H]

Synonym: mll2902

Alternate gene names: 13472566

Gene position: 2339240-2338854 (Counterclockwise)

Preceding gene: 13472567

Following gene: 13472565

Centisome position: 33.25

GC content: 65.12

Gene sequence:

>387_bases
ATGGCCAAGACCAAAGTGGAAGCAGAGATCGACCAGCCGGACGAGCAGCTCGATCGCGCCATCGAGGAATTGCGCGGGGT
CCTGCATGAAGAGGAGCAGCGCCCCGACGCAGCGTTCAGGGCCGCCGCGGGCGCCAATTCGAACGTCATCATGAACATCC
CCGTCGATGTGCAGATCATCCTCGGCAGCACCGAGATGGCGGTTGCCGACCTGATGGCCCTGCAGAAGGGTTCGACGGTG
GCACTCAACCGCCGCATCGGCGAACCGGTCGACGTCGTGGTCAACGGCCGCAAGATCGCCCGCGGCGAGATCACGGTGCT
GGAGAGCGACCCCTCGCGCTTCGGCATCAGGCTGACCGAGATCATCGCCGGCACGAAGGGCGCCTAA

Upstream 100 bases:

>100_bases
ACACCGTCCGAATCAGGCATCCTTTTGATGCCGGGCAGGATTTCATCGATGGGCTCATGCCGGCCAGTGCCGGGCGCGCC
TGAGCTTTTGGAGACGATTC

Downstream 100 bases:

>100_bases
ACATGGCTGGTGGGGCTTGCCGGTTGCAGCGGAGGCGAGAGGCAGCATGACGCCGCTGACGACCCTGACGCGCGCGCAGA
AGGCGGCCGCCATATTGGTG

Product: flagellar motor switch protein FliN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MAKTKVEAEIDQPDEQLDRAIEELRGVLHEEEQRPDAAFRAAAGANSNVIMNIPVDVQIILGSTEMAVADLMALQKGSTV
ALNRRIGEPVDVVVNGRKIARGEITVLESDPSRFGIRLTEIIAGTKGA

Sequences:

>Translated_128_residues
MAKTKVEAEIDQPDEQLDRAIEELRGVLHEEEQRPDAAFRAAAGANSNVIMNIPVDVQIILGSTEMAVADLMALQKGSTV
ALNRRIGEPVDVVVNGRKIARGEITVLESDPSRFGIRLTEIIAGTKGA
>Mature_127_residues
AKTKVEAEIDQPDEQLDRAIEELRGVLHEEEQRPDAAFRAAAGANSNVIMNIPVDVQIILGSTEMAVADLMALQKGSTVA
LNRRIGEPVDVVVNGRKIARGEITVLESDPSRFGIRLTEIIAGTKGA

Specific function: FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliN/MopA/SpaO family [H]

Homologues:

Organism=Escherichia coli, GI1788256, Length=76, Percent_Identity=42.1052631578947, Blast_Score=68, Evalue=2e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012826
- InterPro:   IPR001172
- InterPro:   IPR001543 [H]

Pfam domain/function: PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 13789; Mature: 13658

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTKVEAEIDQPDEQLDRAIEELRGVLHEEEQRPDAAFRAAAGANSNVIMNIPVDVQII
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEECCCEEEEE
LGSTEMAVADLMALQKGSTVALNRRIGEPVDVVVNGRKIARGEITVLESDPSRFGIRLTE
ECCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCEECCCEEEEEECCCCHHCEEEEH
IIAGTKGA
EECCCCCC
>Mature Secondary Structure 
AKTKVEAEIDQPDEQLDRAIEELRGVLHEEEQRPDAAFRAAAGANSNVIMNIPVDVQII
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEECCCEEEEE
LGSTEMAVADLMALQKGSTVALNRRIGEPVDVVVNGRKIARGEITVLESDPSRFGIRLTE
ECCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCEECCCEEEEEECCCCHHCEEEEH
IIAGTKGA
EECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9161425; 11743193; 11743194 [H]