| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472520
Identifier: 13472520
GI number: 13472520
Start: 2280397
End: 2280957
Strand: Reverse
Name: 13472520
Synonym: mll2847
Alternate gene names: NA
Gene position: 2280957-2280397 (Counterclockwise)
Preceding gene: 13472521
Following gene: 13472519
Centisome position: 32.42
GC content: 62.57
Gene sequence:
>561_bases ATGAAAGGACTTGCAGTATTGACTTGCCTGGCGCTCTGCGGCGGCCTCGCGCCGGCCGCGGGGCAGGTTGCGTCGCCGTA CAGGATCAAGCCTTCGGATGTGGTGCTGCCGCCCGACGTGAAACTGGGAACCTATCAGCGCACGATCCGTCCCTTCGAAA ACTGGACGCTGATCTGCGACGAGAACCTCAAGGCCCGCAAGAAGGTCTGCAATGTCTCGCAGGTAATCGAGGACACCTCG GGCAAGATGGCCTTCAGCTGGTCGCTTGCCGCCACGCAGGACGGCAAGCCCTACATGATCGTTCGCACCGCGCCGAACGC CAGGAGCGACGGCCTGGTGTCGCTGAAGTTCGATGGGCGGGACCAGGCGATCGACGTCCACTTGAACGGCTGCAATGACG TGGTCTGCGTCGGCATGCTGCCGGTCGGTCCCGTCATGCGCCAGCAGATCTCGCAGAATGCGACGCCGGCGATTTCCTAT TCCACCGTCGACGGCAAGACGATCACCGTGACCGCAGCAACACTGAAGGGGCTGTCGGCAGCCCTTTCGCCACTCAAATG A
Upstream 100 bases:
>100_bases AGCGAGGACGGCCGCATCCGCGGCAACGTGTCGGGCACGGCCGCTGGCGGTCATGTCGGCGTCGGCGCCGGCATCAGCTT CACCTTGAACTGAGGCAGGA
Downstream 100 bases:
>100_bases CCGGGGCAACACAATGAGCCAGCAGGACCAGTTCACGTCCGTAAAACGCAGCAGCCCGGCCGTCGAGGCGGACCGGCAGC GGCTCGTCGAACCGGCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide Protein
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MKGLAVLTCLALCGGLAPAAGQVASPYRIKPSDVVLPPDVKLGTYQRTIRPFENWTLICDENLKARKKVCNVSQVIEDTS GKMAFSWSLAATQDGKPYMIVRTAPNARSDGLVSLKFDGRDQAIDVHLNGCNDVVCVGMLPVGPVMRQQISQNATPAISY STVDGKTITVTAATLKGLSAALSPLK
Sequences:
>Translated_186_residues MKGLAVLTCLALCGGLAPAAGQVASPYRIKPSDVVLPPDVKLGTYQRTIRPFENWTLICDENLKARKKVCNVSQVIEDTS GKMAFSWSLAATQDGKPYMIVRTAPNARSDGLVSLKFDGRDQAIDVHLNGCNDVVCVGMLPVGPVMRQQISQNATPAISY STVDGKTITVTAATLKGLSAALSPLK >Mature_186_residues MKGLAVLTCLALCGGLAPAAGQVASPYRIKPSDVVLPPDVKLGTYQRTIRPFENWTLICDENLKARKKVCNVSQVIEDTS GKMAFSWSLAATQDGKPYMIVRTAPNARSDGLVSLKFDGRDQAIDVHLNGCNDVVCVGMLPVGPVMRQQISQNATPAISY STVDGKTITVTAATLKGLSAALSPLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19762; Mature: 19762
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGLAVLTCLALCGGLAPAAGQVASPYRIKPSDVVLPPDVKLGTYQRTIRPFENWTLICD CCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEECCCCCCCCHHHHCCCCCCEEEEEC ENLKARKKVCNVSQVIEDTSGKMAFSWSLAATQDGKPYMIVRTAPNARSDGLVSLKFDGR CCCHHHHHHHCHHHHHHCCCCCEEEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEECCC DQAIDVHLNGCNDVVCVGMLPVGPVMRQQISQNATPAISYSTVDGKTITVTAATLKGLSA CCEEEEEECCCCCEEEEEECCCCHHHHHHHHCCCCCEEEEEECCCCEEEEEHHHHHHHHH ALSPLK HHCCCC >Mature Secondary Structure MKGLAVLTCLALCGGLAPAAGQVASPYRIKPSDVVLPPDVKLGTYQRTIRPFENWTLICD CCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEECCCCCCCCHHHHCCCCCCEEEEEC ENLKARKKVCNVSQVIEDTSGKMAFSWSLAATQDGKPYMIVRTAPNARSDGLVSLKFDGR CCCHHHHHHHCHHHHHHCCCCCEEEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEECCC DQAIDVHLNGCNDVVCVGMLPVGPVMRQQISQNATPAISYSTVDGKTITVTAATLKGLSA CCEEEEEECCCCCEEEEEECCCCHHHHHHHHCCCCCEEEEEECCCCEEEEEHHHHHHHHH ALSPLK HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA