| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yadA [H]
Identifier: 13472521
GI number: 13472521
Start: 2280965
End: 2286826
Strand: Reverse
Name: yadA [H]
Synonym: mll2848
Alternate gene names: 13472521
Gene position: 2286826-2280965 (Counterclockwise)
Preceding gene: 13472522
Following gene: 13472520
Centisome position: 32.5
GC content: 68.03
Gene sequence:
>5862_bases ATGACCGACAATCAGATTTCGAGTGGCTCGTTTGTTCAGCATCGCGCGGCGCATTTCGCCAGGCATTGGATTGCGGGGGC CGAGCAAGGCTCCCGCGCGCTCCGCCGCCGCCTGATGGCGGTGCTGCGCATGGCGCACCGCGTGCTCGGCATGCGCCGCA AGGGATCTGGGCTCGGCATGCTCGGCATCGGCAGGGTTCTGGCAGCGGCGCTGGGTGCGATTGCATTGGGCGGCATCGCC ACGCCGGCACTGGCACAGTATGCCGCTGGCGGCGGTACGGCGAACAGCGCCGGTTCGGTGGCGGTCGGACCGTCCGCCAC CACGAATGGGCTGCGGGGCATCGCGGTTGGGTCGGGAGCAACTCAGGCCGGCATCGATTCCATTGCCCAAGGCACCAGCG CCAACGCTGGCAGCCAGAACGCCGTCGCGATCGGCTTCCAGTCGATCGCCTCACAGCTCAACTCCATTTATCTTGGCTCG CGCACCGCCGCCGGGACGGGTGCCACCGCCCAGAGCGCCATCGGCATCGGCACGGATGTCACGGCATCCCAGGTCGACGC CATCGCGGTCGGACGGTCATCCGTTGCGTCGGCGCAATACTCGGTGGCTCTCGGCCTGAGCGCCAAGGCCACAGGCACAG GCGGCGCGATGGCGCTGGGGCAAGGCACGATCGCAAGCAATATTAATTCGGTAGCGCTCGGCGTCCAGGCTAGCGCCACC GGGGGCGGCGCCAACGCCTTGGGCACCTTCTCTGTTGCTTCGGGAGGGAATTCCACCGCTGTCGGTACCAGTTCGTCCGC CGCTGGCGGCTTGTCATTCGCCGGAGGCTGGTCGGCCGTCGCCAGCGGGGACAGTGCCGTCGCCTTAGGCAAGTCGGCCA ACGCGGCAGGGCTGAACTCGACCGCGCTCGGCTCCAGCACCAATGCCTCGGCCGATTTCGCATTGGCGCTGGGTAACCAG GCCGTGTCGAGCGGTATCGGCTCTGTCGCGGCTGGCTCGGGATCCCAAGCCACGGGCGTGTCCGCCACCGCACTCGGCAA CAATGCCGCGGCGACCGCCGCCAACGCAACCGCGCTGGGACTGGGCGCTACGGCGGGCGGTGTAGACGGCACGGCGATCG GCAAGCAAGCCAATGCGAGCGCGCAGGACGCCATCGCAATGGGCACCAGCGCCAAGGCCAGTTCGGCCCAAGCCATTGCC GTGGGCATCAATGCGGTGGCGACCGGCGGCAAGGCCGTCTCTATCGGCTCGGGCAACACCGCTTACGGCGATGGCGCGGT CTCCATCGGTGATCCCAGCTATGCCAGCGGCACCGGCGCCTTCACCGGCGGCGCCAACAACATCGCCAACAGCGACGGCA CGGCAACCGCCACCGCCGCCAACCAGGCGGCGGGCGCGGTCGCCATCGGCAACAACAACAAGGCCATCGGACAAGGCTCC GTGGCATTGGGCAACGGCTCAACGGCAGGTGCCGCCGGCCTTGCGGGCAATGTCGCGCTGGGCAATGGCGCGACGGCGGC GGCGAGCTCCGGCGATGTCGCGCTCGGTTCGGGCTCGGTGACCGCCGTGGCGGTCGGCACGCCCAATGCGGTCATCAACG GCACGACCTATGCCTTCCAGGGCACGACGCCGACTTCGACGGTCAGCATCGGCGCGCCCGGCGCGGAGCGCACGCTCACC AATGTCGCTGCGGGCCGGATCAGTGGATCCTCGACCGACGCGGTCAACGGTTCGCAGCTCTTCGCCACCAACCAGGCGGT CGATGCCATCGGCACCACGCTCAACAACATCAATGTCGGCGGCGGCATCAAATATTTCCACGCCAACTCGACGCTGGCGG ACTCGTCGGCGACGGGTACCGACTCGGTCGCAATCGGACCCACCTCGACCGCGACGGCGTCGAGCGCCATCGCCGCCGGC AGCAATGCGAACGCCTCCGGCGCCAACGCCTCGGCCATCGGCACCAGCTCTGTCGCATCGGCCCTCGACGCAACGGCGAT GGGTTTTCTATCCAAGGCCTCGGGCCAGTTCAGCACCGCCGTCGGCGCCAACGCAAATGCTACAGCTTTGTCCAGCACGG CGATCGGCCAGAACGCACTCGCATCCGGCGTTCAAGCGACCGCTCTCGGCAAACAAGCCAATGCCGGCGCCTCGGAGGCA CTCGCTCTGGGCGCCAACTCCACCGCCGGCAACGCAGGCGACGTGGCGCTGGGCTCGGGCTCGGTGACCGCCGTCGCTGT CGGCACGCCCAATGCGGTGATCAACGGCACGACCTATGCCTTCCAGGGCATCAATCCGGCCTCGACGGTCAGCATCGGCG CGCCCGGCGCGGAACGCACGCTCACCAATCTGGCGGCGGGTCGGATCAGCGGGTCCTCGACCGACGCGGTCAACGGCTCG CAGCTGTTCGCCACCAACCAGGCGGTCGACGCCATCGGCACCACTGTCAACAACATCAGCACCGGCGGCGGCATCAAATA TTTCCACGCCAACTCGACGCTGGCGGACTCGTCGGCGACGGGTACCGACTCGGTCGCAATCGGACCCACCTCGACCGCGA CGGCGTCGAGCGCCATCGCCGCCGGCAGCAATGCGAACGCCTCCGGCGCCAACGCCTCGGCCATCGGCACCAGCTCTGTC GCATCGGCCCTCGACGCAACGGCGATGGGTTTTCTGTCCAAGGCCTCGGGCCAGTTCAGCACCGCCGTCGGCGCCAACGC AAATGCTACAGCTTTGTCCAGCACGGCGATCGGCCAGAACGCACTCGCATCCGGCGTTCAAGCGACCGCTCTCGGCAAAC AAGCGAATGCCAGCGCCTCGGATGCGCTCGCTCTGGGCGCCAACTCCACCGCCGGCAACGCAGGCGACGTGGCGCTGGGC TCGGGCTCGGTGACCGCCGTCGCTGTCGGCACGCCTAATGCGGTGATCAACGGCACGACCTATGCCTTCCAGGGCATCAA TCCGGCCTCGACGGTCAGCATCGGCGCGCCCGGCGCGGAACGCACGCTCACCAATCTGGCGGCGGGTCGGATCAGCGGGT CCTCGACCGACGCGGTCAACGGCTCGCAGCTCTTCGCCACCAACCAGGCGGTCGATGCCATCGGCACCACTGTCAACAAC ATCAGCACCGGCGGCGGCATCAAATATTTCCACGCCAACTCGACGCTGGCGGACTCGTCGGCGACGGGTACCGACTCGGT CGCAATCGGACCCACCTCGACCGCGACGGCGTCGAGCGCCATCGCCGCCGGCAGCAATGCGAACGCCTCCGGCGCCAACG CCTCGGCCATCGGCACCAGCTCTGTCGCATCGGCCCTCGACGCAACGGCGATGGGTTTTCTGTCCAAGGCCTCGGGCCAG TTCAGCACCGCCGTCGGCGCCAACGCAAATGCTACAGCTTTGTCCAGCACGGCGATCGGCCAGAACGCACTCGCATCCGG CGTTCAAGCGACCGCTCTCGGCAAACAAGCCAATGCCGGCGCCTCGGATGCGCTCGCTCTGGGCGCCAACTCCACCGCCG GCAACGCAGGCGACGTGGCGCTGGGCTCGGGCTCGGTGACCGCCGTCGCTGTCGGCACGCCCAATGCGGTGATCAACGGC ACGACCTATGCCTTCCAGGGCATCAATCCGGCCTCGACGGTCAGCATCGGCGCGCCCGGCGCGGAACGCACGCTCACCAA TCTGGCGGCGGGTCGGATCAGCGGGTCCTCGACCGACGCGGTCAACGGCTCGCAGCTGTTCGCCACCAACCAGGCGGTCG ACGCCATCGGCACCACCGTCAACAATCTCGGCGGCTCCGTCACCAATCTTGGCAACGTCGTCAACAACATCGCCGGCGAC ACCTCGACCGCCTATACCGACGCCAACGGCATAGGCATCCGCTACGCCCGCACCAACGAGGCCGGACTGGCGCAAACCGA TTCCTTCGCGCAAGGGCTCGGCTCCACCGCCGTCGGCTACCAGGCAAGCGCGACCGGCGTCAGCGGGCTGGCGCTCGGCC GCGGCACATTGGCCAGCATCGACGGCAGCGTCGCGCTTGGTTCGGGTTCCGTGGCCGACCGGGCCGTGGCGCCAGCCACC GGCCAGATCGCGGCCGGTCCTGCCAACTTCATCCAGTACAACACCACCGACAAGACGCTGCTCGGCGCCGTGTCGGTCGG CACCGCCACGTCCTACCGCCAGATCACCAATGTGGCCGACGGCACGCAGGCGCAGGATGCCGTCACCGTGCGCCAGCTGC AGGGGGTGATCGCCTCGGTCTCGGCGACGTCGACCAAATATTTCCATGCCAATTCGACGGCCGGCGACTCGCTCGCGGTG GGCGCCGAGTCGGTCGCGGTCGGCCCGACGACGGTCGTCAACGGTGACAATGGCATCGGTATCGGCAACGGCGCCATCGT CGACCAGATCGCGCCGGGCGGAACGGCCATCGGCCAGAATGCCCATGTCATGCTGGCCGACGGGTTGGCGCTGGGCACCA ATTCGCTGGCGTCCGGCATCCAGTCGGTGGCGCTCGGCGCCGGCGCCCAAAGCACCTTCATCAACAGCGTCGCGCTGGGC GCGCAGTCCGTCACCACGGTCGGCGCCCAGGCCGGCTACACGGCCTTTGCGCTCACCGCCCCGCAGACCTCGGTCGGCGA AGTGTCGATCGGCGGCGCGGGAGCCGAACGCAAGCTCACCAACGTCGCGGCGGGCTCGGCCAATACCGACGCCGTCAACG TCTCCCAGCTTAAGGGCGTGTCGCAAAACGTCGCCAACCTGTTCGGCGGCAGCACCACGGTCAATCCCGACGGGTCGATC ACCGGCCCGACCTATACGATCCAGGGCAACAATTATTCGACCGTCTATGACGGGTTCACGGCCGTCAACAATGCGCTGAC CAACATCAGCAATGGCGGCGGCATCAAGTATTTCCACGCCAATTCGACGCTGGCCGACTCCACCGCCAGCGGCACCGACA GCGTCGCGATCGGGCCGGCCAGCGTGGCCAGCGGCACCAACAGCCTTGCCGCCGGCAATGGCTCGACGGCCACGGGCCAG GGCGCGGTGGCACTCGGCCAGGGCGCCAAGGCCAACAACGCCAATGACGTGGCGCTGGGTTCGGGCTCGGTGACGCAGAC CGCGGTCGGCACCTCCAGCACCGTCATCAACGGCAAGACCTACGCCTTCGCCGGCACTACCCCGACCGGGACCGTCAGCG TCGGCGATGCCGGCGCCGAGCGGACGATCACCAATGTCGCCGCCGGACGGGTCAACGCCGGCAGCACCGATGCGATAAAC GGCTCGCAGCTCTACGCCACCAACACGGCGGTCGAGGATTTGAAATCGGGCTTGGGATCGCTCACCCAGAATGCCGTCAC CTATGACACCAATCCGGACGGCAGCAAGAAGAACAGCATTACGCTGCAGGGTGGCGACGTCAACGCGCCGGTGGTCATCT CCAATGTCGGCCCGGGTGTTGCCGGCACCGATGCGGTCAACGTCACCCAGATGAACAACCGTGTCGATTACGCCATCAAC ACGTCCAACAGCTACACCGACAAGGTGGCCGCCACGACCTTGCAGCAGGCCAACAACTATACCGACCAGAAGCTCAGCCA GCTCAATAGCGACCTGGGCGGCATACGCGACGAAGCCCGCCAGGCGGCGGCGATCGGCCTTGCCGCTGCCTCGCTGCGCT ACGACGACCGTCCCGGCAAGCTGAGCGTCGCGGCCGGCGGCGGCTTCTGGCGGGATTCGAGCGCCTTGGCCTTCGGTGCG GGCTACACGAGCGAGGACGGCCGCATCCGCGGCAACGTGTCGGGCACGGCCGCTGGCGGTCATGTCGGCGTCGGCGCCGG CATCAGCTTCACCTTGAACTGA
Upstream 100 bases:
>100_bases AAACAGCAATTTCCTGAAATACGGCAAACCAGAATCGTGGCTTTCTGCGAGTGCTGGAATTTGTCAGACATTTCCTGGCG GCTGGCGAACGGAGAGGACC
Downstream 100 bases:
>100_bases GGCAGGAATGAAAGGACTTGCAGTATTGACTTGCCTGGCGCTCTGCGGCGGCCTCGCGCCGGCCGCGGGGCAGGTTGCGT CGCCGTACAGGATCAAGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 1953; Mature: 1952
Protein sequence:
>1953_residues MTDNQISSGSFVQHRAAHFARHWIAGAEQGSRALRRRLMAVLRMAHRVLGMRRKGSGLGMLGIGRVLAAALGAIALGGIA TPALAQYAAGGGTANSAGSVAVGPSATTNGLRGIAVGSGATQAGIDSIAQGTSANAGSQNAVAIGFQSIASQLNSIYLGS RTAAGTGATAQSAIGIGTDVTASQVDAIAVGRSSVASAQYSVALGLSAKATGTGGAMALGQGTIASNINSVALGVQASAT GGGANALGTFSVASGGNSTAVGTSSSAAGGLSFAGGWSAVASGDSAVALGKSANAAGLNSTALGSSTNASADFALALGNQ AVSSGIGSVAAGSGSQATGVSATALGNNAAATAANATALGLGATAGGVDGTAIGKQANASAQDAIAMGTSAKASSAQAIA VGINAVATGGKAVSIGSGNTAYGDGAVSIGDPSYASGTGAFTGGANNIANSDGTATATAANQAAGAVAIGNNNKAIGQGS VALGNGSTAGAAGLAGNVALGNGATAAASSGDVALGSGSVTAVAVGTPNAVINGTTYAFQGTTPTSTVSIGAPGAERTLT NVAAGRISGSSTDAVNGSQLFATNQAVDAIGTTLNNINVGGGIKYFHANSTLADSSATGTDSVAIGPTSTATASSAIAAG SNANASGANASAIGTSSVASALDATAMGFLSKASGQFSTAVGANANATALSSTAIGQNALASGVQATALGKQANAGASEA LALGANSTAGNAGDVALGSGSVTAVAVGTPNAVINGTTYAFQGINPASTVSIGAPGAERTLTNLAAGRISGSSTDAVNGS QLFATNQAVDAIGTTVNNISTGGGIKYFHANSTLADSSATGTDSVAIGPTSTATASSAIAAGSNANASGANASAIGTSSV ASALDATAMGFLSKASGQFSTAVGANANATALSSTAIGQNALASGVQATALGKQANASASDALALGANSTAGNAGDVALG SGSVTAVAVGTPNAVINGTTYAFQGINPASTVSIGAPGAERTLTNLAAGRISGSSTDAVNGSQLFATNQAVDAIGTTVNN ISTGGGIKYFHANSTLADSSATGTDSVAIGPTSTATASSAIAAGSNANASGANASAIGTSSVASALDATAMGFLSKASGQ FSTAVGANANATALSSTAIGQNALASGVQATALGKQANAGASDALALGANSTAGNAGDVALGSGSVTAVAVGTPNAVING TTYAFQGINPASTVSIGAPGAERTLTNLAAGRISGSSTDAVNGSQLFATNQAVDAIGTTVNNLGGSVTNLGNVVNNIAGD TSTAYTDANGIGIRYARTNEAGLAQTDSFAQGLGSTAVGYQASATGVSGLALGRGTLASIDGSVALGSGSVADRAVAPAT GQIAAGPANFIQYNTTDKTLLGAVSVGTATSYRQITNVADGTQAQDAVTVRQLQGVIASVSATSTKYFHANSTAGDSLAV GAESVAVGPTTVVNGDNGIGIGNGAIVDQIAPGGTAIGQNAHVMLADGLALGTNSLASGIQSVALGAGAQSTFINSVALG AQSVTTVGAQAGYTAFALTAPQTSVGEVSIGGAGAERKLTNVAAGSANTDAVNVSQLKGVSQNVANLFGGSTTVNPDGSI TGPTYTIQGNNYSTVYDGFTAVNNALTNISNGGGIKYFHANSTLADSTASGTDSVAIGPASVASGTNSLAAGNGSTATGQ GAVALGQGAKANNANDVALGSGSVTQTAVGTSSTVINGKTYAFAGTTPTGTVSVGDAGAERTITNVAAGRVNAGSTDAIN GSQLYATNTAVEDLKSGLGSLTQNAVTYDTNPDGSKKNSITLQGGDVNAPVVISNVGPGVAGTDAVNVTQMNNRVDYAIN TSNSYTDKVAATTLQQANNYTDQKLSQLNSDLGGIRDEARQAAAIGLAAASLRYDDRPGKLSVAAGGGFWRDSSALAFGA GYTSEDGRIRGNVSGTAAGGHVGVGAGISFTLN
Sequences:
>Translated_1953_residues MTDNQISSGSFVQHRAAHFARHWIAGAEQGSRALRRRLMAVLRMAHRVLGMRRKGSGLGMLGIGRVLAAALGAIALGGIA TPALAQYAAGGGTANSAGSVAVGPSATTNGLRGIAVGSGATQAGIDSIAQGTSANAGSQNAVAIGFQSIASQLNSIYLGS RTAAGTGATAQSAIGIGTDVTASQVDAIAVGRSSVASAQYSVALGLSAKATGTGGAMALGQGTIASNINSVALGVQASAT GGGANALGTFSVASGGNSTAVGTSSSAAGGLSFAGGWSAVASGDSAVALGKSANAAGLNSTALGSSTNASADFALALGNQ AVSSGIGSVAAGSGSQATGVSATALGNNAAATAANATALGLGATAGGVDGTAIGKQANASAQDAIAMGTSAKASSAQAIA VGINAVATGGKAVSIGSGNTAYGDGAVSIGDPSYASGTGAFTGGANNIANSDGTATATAANQAAGAVAIGNNNKAIGQGS VALGNGSTAGAAGLAGNVALGNGATAAASSGDVALGSGSVTAVAVGTPNAVINGTTYAFQGTTPTSTVSIGAPGAERTLT NVAAGRISGSSTDAVNGSQLFATNQAVDAIGTTLNNINVGGGIKYFHANSTLADSSATGTDSVAIGPTSTATASSAIAAG SNANASGANASAIGTSSVASALDATAMGFLSKASGQFSTAVGANANATALSSTAIGQNALASGVQATALGKQANAGASEA LALGANSTAGNAGDVALGSGSVTAVAVGTPNAVINGTTYAFQGINPASTVSIGAPGAERTLTNLAAGRISGSSTDAVNGS QLFATNQAVDAIGTTVNNISTGGGIKYFHANSTLADSSATGTDSVAIGPTSTATASSAIAAGSNANASGANASAIGTSSV ASALDATAMGFLSKASGQFSTAVGANANATALSSTAIGQNALASGVQATALGKQANASASDALALGANSTAGNAGDVALG SGSVTAVAVGTPNAVINGTTYAFQGINPASTVSIGAPGAERTLTNLAAGRISGSSTDAVNGSQLFATNQAVDAIGTTVNN ISTGGGIKYFHANSTLADSSATGTDSVAIGPTSTATASSAIAAGSNANASGANASAIGTSSVASALDATAMGFLSKASGQ FSTAVGANANATALSSTAIGQNALASGVQATALGKQANAGASDALALGANSTAGNAGDVALGSGSVTAVAVGTPNAVING TTYAFQGINPASTVSIGAPGAERTLTNLAAGRISGSSTDAVNGSQLFATNQAVDAIGTTVNNLGGSVTNLGNVVNNIAGD TSTAYTDANGIGIRYARTNEAGLAQTDSFAQGLGSTAVGYQASATGVSGLALGRGTLASIDGSVALGSGSVADRAVAPAT GQIAAGPANFIQYNTTDKTLLGAVSVGTATSYRQITNVADGTQAQDAVTVRQLQGVIASVSATSTKYFHANSTAGDSLAV GAESVAVGPTTVVNGDNGIGIGNGAIVDQIAPGGTAIGQNAHVMLADGLALGTNSLASGIQSVALGAGAQSTFINSVALG AQSVTTVGAQAGYTAFALTAPQTSVGEVSIGGAGAERKLTNVAAGSANTDAVNVSQLKGVSQNVANLFGGSTTVNPDGSI TGPTYTIQGNNYSTVYDGFTAVNNALTNISNGGGIKYFHANSTLADSTASGTDSVAIGPASVASGTNSLAAGNGSTATGQ GAVALGQGAKANNANDVALGSGSVTQTAVGTSSTVINGKTYAFAGTTPTGTVSVGDAGAERTITNVAAGRVNAGSTDAIN GSQLYATNTAVEDLKSGLGSLTQNAVTYDTNPDGSKKNSITLQGGDVNAPVVISNVGPGVAGTDAVNVTQMNNRVDYAIN TSNSYTDKVAATTLQQANNYTDQKLSQLNSDLGGIRDEARQAAAIGLAAASLRYDDRPGKLSVAAGGGFWRDSSALAFGA GYTSEDGRIRGNVSGTAAGGHVGVGAGISFTLN >Mature_1952_residues TDNQISSGSFVQHRAAHFARHWIAGAEQGSRALRRRLMAVLRMAHRVLGMRRKGSGLGMLGIGRVLAAALGAIALGGIAT PALAQYAAGGGTANSAGSVAVGPSATTNGLRGIAVGSGATQAGIDSIAQGTSANAGSQNAVAIGFQSIASQLNSIYLGSR TAAGTGATAQSAIGIGTDVTASQVDAIAVGRSSVASAQYSVALGLSAKATGTGGAMALGQGTIASNINSVALGVQASATG GGANALGTFSVASGGNSTAVGTSSSAAGGLSFAGGWSAVASGDSAVALGKSANAAGLNSTALGSSTNASADFALALGNQA VSSGIGSVAAGSGSQATGVSATALGNNAAATAANATALGLGATAGGVDGTAIGKQANASAQDAIAMGTSAKASSAQAIAV GINAVATGGKAVSIGSGNTAYGDGAVSIGDPSYASGTGAFTGGANNIANSDGTATATAANQAAGAVAIGNNNKAIGQGSV ALGNGSTAGAAGLAGNVALGNGATAAASSGDVALGSGSVTAVAVGTPNAVINGTTYAFQGTTPTSTVSIGAPGAERTLTN VAAGRISGSSTDAVNGSQLFATNQAVDAIGTTLNNINVGGGIKYFHANSTLADSSATGTDSVAIGPTSTATASSAIAAGS NANASGANASAIGTSSVASALDATAMGFLSKASGQFSTAVGANANATALSSTAIGQNALASGVQATALGKQANAGASEAL ALGANSTAGNAGDVALGSGSVTAVAVGTPNAVINGTTYAFQGINPASTVSIGAPGAERTLTNLAAGRISGSSTDAVNGSQ LFATNQAVDAIGTTVNNISTGGGIKYFHANSTLADSSATGTDSVAIGPTSTATASSAIAAGSNANASGANASAIGTSSVA SALDATAMGFLSKASGQFSTAVGANANATALSSTAIGQNALASGVQATALGKQANASASDALALGANSTAGNAGDVALGS GSVTAVAVGTPNAVINGTTYAFQGINPASTVSIGAPGAERTLTNLAAGRISGSSTDAVNGSQLFATNQAVDAIGTTVNNI STGGGIKYFHANSTLADSSATGTDSVAIGPTSTATASSAIAAGSNANASGANASAIGTSSVASALDATAMGFLSKASGQF STAVGANANATALSSTAIGQNALASGVQATALGKQANAGASDALALGANSTAGNAGDVALGSGSVTAVAVGTPNAVINGT TYAFQGINPASTVSIGAPGAERTLTNLAAGRISGSSTDAVNGSQLFATNQAVDAIGTTVNNLGGSVTNLGNVVNNIAGDT STAYTDANGIGIRYARTNEAGLAQTDSFAQGLGSTAVGYQASATGVSGLALGRGTLASIDGSVALGSGSVADRAVAPATG QIAAGPANFIQYNTTDKTLLGAVSVGTATSYRQITNVADGTQAQDAVTVRQLQGVIASVSATSTKYFHANSTAGDSLAVG AESVAVGPTTVVNGDNGIGIGNGAIVDQIAPGGTAIGQNAHVMLADGLALGTNSLASGIQSVALGAGAQSTFINSVALGA QSVTTVGAQAGYTAFALTAPQTSVGEVSIGGAGAERKLTNVAAGSANTDAVNVSQLKGVSQNVANLFGGSTTVNPDGSIT GPTYTIQGNNYSTVYDGFTAVNNALTNISNGGGIKYFHANSTLADSTASGTDSVAIGPASVASGTNSLAAGNGSTATGQG AVALGQGAKANNANDVALGSGSVTQTAVGTSSTVINGKTYAFAGTTPTGTVSVGDAGAERTITNVAAGRVNAGSTDAING SQLYATNTAVEDLKSGLGSLTQNAVTYDTNPDGSKKNSITLQGGDVNAPVVISNVGPGVAGTDAVNVTQMNNRVDYAINT SNSYTDKVAATTLQQANNYTDQKLSQLNSDLGGIRDEARQAAAIGLAAASLRYDDRPGKLSVAAGGGFWRDSSALAFGAG YTSEDGRIRGNVSGTAAGGHVGVGAGISFTLN
Specific function: Collagen-binding outer membrane protein forming a fibrillar matrix on the bacterial cell surface. Promotes attachment to eukaryotic cells and after invasion, is the major adhesin in infected tissue. Constitutes an alternative uptake pathway under conditio
COG id: COG5295
COG function: function code UW; Autotransporter adhesin
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the autotransporter-2 (TC 1.B.40) / oligomeric coiled-coil adhesin (Oca) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008640 - InterPro: IPR008635 - InterPro: IPR008126 - InterPro: IPR005594 [H]
Pfam domain/function: PF05658 Hep_Hag; PF05662 HIM; PF03895 YadA [H]
EC number: NA
Molecular weight: Translated: 184559; Mature: 184428
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: PS00359 RIBOSOMAL_L11
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDNQISSGSFVQHRAAHFARHWIAGAEQGSRALRRRLMAVLRMAHRVLGMRRKGSGLGM CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH LGIGRVLAAALGAIALGGIATPALAQYAAGGGTANSAGSVAVGPSATTNGLRGIAVGSGA HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCEEEEECCCC TQAGIDSIAQGTSANAGSQNAVAIGFQSIASQLNSIYLGSRTAAGTGATAQSAIGIGTDV CHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHEEECCCCCCCCCCCHHHHCCCCCCC TASQVDAIAVGRSSVASAQYSVALGLSAKATGTGGAMALGQGTIASNINSVALGVQASAT CHHHHHEEEECCHHHCCCEEEEEEECEECCCCCCCEEEECCCHHHCCCCEEEEEEEEECC GGGANALGTFSVASGGNSTAVGTSSSAAGGLSFAGGWSAVASGDSAVALGKSANAAGLNS CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEECCCCHHHCCCCCEEEECCCCCCCCCCC TALGSSTNASADFALALGNQAVSSGIGSVAAGSGSQATGVSATALGNNAAATAANATALG CCCCCCCCCCCEEEEEECCHHHHCCCCCEECCCCCCCCCEEEEECCCCCCCCCCCCEEEE LGATAGGVDGTAIGKQANASAQDAIAMGTSAKASSAQAIAVGINAVATGGKAVSIGSGNT CCCCCCCCCCCCCCCCCCCCHHHHEEECCCCCCCCCCEEEEEEEEEECCCCEEEECCCCC AYGDGAVSIGDPSYASGTGAFTGGANNIANSDGTATATAANQAAGAVAIGNNNKAIGQGS CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCC VALGNGSTAGAAGLAGNVALGNGATAAASSGDVALGSGSVTAVAVGTPNAVINGTTYAFQ EEECCCCCCCCCCCCCCEEECCCCCCCCCCCCEEECCCCEEEEEECCCCEEECCEEEEEE GTTPTSTVSIGAPGAERTLTNVAAGRISGSSTDAVNGSQLFATNQAVDAIGTTLNNINVG CCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCEECC GGIKYFHANSTLADSSATGTDSVAIGPTSTATASSAIAAGSNANASGANASAIGTSSVAS CCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCHHEECCCCCCCCCCCCCCCCHHHHHH ALDATAMGFLSKASGQFSTAVGANANATALSSTAIGQNALASGVQATALGKQANAGASEA HHHHHHHHHHHHCCCCEEEECCCCCCCCEEEHHHCCHHHHHCCCEEEECCCCCCCCCCCE LALGANSTAGNAGDVALGSGSVTAVAVGTPNAVINGTTYAFQGINPASTVSIGAPGAERT EEECCCCCCCCCCCEEECCCCEEEEEECCCCEEECCCEEEEECCCCCCEEEECCCCHHHH LTNLAAGRISGSSTDAVNGSQLFATNQAVDAIGTTVNNISTGGGIKYFHANSTLADSSAT HHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCC GTDSVAIGPTSTATASSAIAAGSNANASGANASAIGTSSVASALDATAMGFLSKASGQFS CCCCEEECCCCCCCCCHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEE TAVGANANATALSSTAIGQNALASGVQATALGKQANASASDALALGANSTAGNAGDVALG EECCCCCCCCEEEHHHCCHHHHHCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCEEEC SGSVTAVAVGTPNAVINGTTYAFQGINPASTVSIGAPGAERTLTNLAAGRISGSSTDAVN CCCEEEEEECCCCEEECCCEEEEECCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCC GSQLFATNQAVDAIGTTVNNISTGGGIKYFHANSTLADSSATGTDSVAIGPTSTATASSA CCEEEECCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCHH IAAGSNANASGANASAIGTSSVASALDATAMGFLSKASGQFSTAVGANANATALSSTAIG EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEHHHCC QNALASGVQATALGKQANAGASDALALGANSTAGNAGDVALGSGSVTAVAVGTPNAVING HHHHHCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCEEECCCCEEEEEECCCCEEECC TTYAFQGINPASTVSIGAPGAERTLTNLAAGRISGSSTDAVNGSQLFATNQAVDAIGTTV CEEEEECCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHH NNLGGSVTNLGNVVNNIAGDTSTAYTDANGIGIRYARTNEAGLAQTDSFAQGLGSTAVGY HHCCCCHHHHHHHHHHHCCCCCCEEECCCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCC QASATGVSGLALGRGTLASIDGSVALGSGSVADRAVAPATGQIAAGPANFIQYNTTDKTL CCCCCCCCEEEECCCCEEECCCCEEECCCCCCCCCCCCCCCCEECCCCCEEEECCCCCEE LGAVSVGTATSYRQITNVADGTQAQDAVTVRQLQGVIASVSATSTKYFHANSTAGDSLAV EEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEE GAESVAVGPTTVVNGDNGIGIGNGAIVDQIAPGGTAIGQNAHVMLADGLALGTNSLASGI CCCEEECCCEEEEECCCCEECCCCCEEECCCCCCCCCCCCCEEEEECCEEECCHHHHHHH QSVALGAGAQSTFINSVALGAQSVTTVGAQAGYTAFALTAPQTSVGEVSIGGAGAERKLT HHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCCCCHHHH NVAAGSANTDAVNVSQLKGVSQNVANLFGGSTTVNPDGSITGPTYTIQGNNYSTVYDGFT HEECCCCCCCEEEHHHHHCHHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCCEECCCHH AVNNALTNISNGGGIKYFHANSTLADSTASGTDSVAIGPASVASGTNSLAAGNGSTATGQ HHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCHHHCCCCCCEECCCCCCCCCC GAVALGQGAKANNANDVALGSGSVTQTAVGTSSTVINGKTYAFAGTTPTGTVSVGDAGAE CCEEECCCCCCCCCCCEEECCCCCEEEECCCCCEEECCCEEEEECCCCCCEEEECCCCCH RTITNVAAGRVNAGSTDAINGSQLYATNTAVEDLKSGLGSLTQNAVTYDTNPDGSKKNSI HHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCEE TLQGGDVNAPVVISNVGPGVAGTDAVNVTQMNNRVDYAINTSNSYTDKVAATTLQQANNY EEECCCCCCCEEEECCCCCCCCCCEEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHCCC TDQKLSQLNSDLGGIRDEARQAAAIGLAAASLRYDDRPGKLSVAAGGGFWRDSSALAFGA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCCCCCCCCEEEEC GYTSEDGRIRGNVSGTAAGGHVGVGAGISFTLN CCCCCCCEEEECCCCCCCCCCEEECCCEEEEEC >Mature Secondary Structure TDNQISSGSFVQHRAAHFARHWIAGAEQGSRALRRRLMAVLRMAHRVLGMRRKGSGLGM CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH LGIGRVLAAALGAIALGGIATPALAQYAAGGGTANSAGSVAVGPSATTNGLRGIAVGSGA HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCEEEEECCCC TQAGIDSIAQGTSANAGSQNAVAIGFQSIASQLNSIYLGSRTAAGTGATAQSAIGIGTDV CHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHEEECCCCCCCCCCCHHHHCCCCCCC TASQVDAIAVGRSSVASAQYSVALGLSAKATGTGGAMALGQGTIASNINSVALGVQASAT CHHHHHEEEECCHHHCCCEEEEEEECEECCCCCCCEEEECCCHHHCCCCEEEEEEEEECC GGGANALGTFSVASGGNSTAVGTSSSAAGGLSFAGGWSAVASGDSAVALGKSANAAGLNS CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEECCCCHHHCCCCCEEEECCCCCCCCCCC TALGSSTNASADFALALGNQAVSSGIGSVAAGSGSQATGVSATALGNNAAATAANATALG CCCCCCCCCCCEEEEEECCHHHHCCCCCEECCCCCCCCCEEEEECCCCCCCCCCCCEEEE LGATAGGVDGTAIGKQANASAQDAIAMGTSAKASSAQAIAVGINAVATGGKAVSIGSGNT CCCCCCCCCCCCCCCCCCCCHHHHEEECCCCCCCCCCEEEEEEEEEECCCCEEEECCCCC AYGDGAVSIGDPSYASGTGAFTGGANNIANSDGTATATAANQAAGAVAIGNNNKAIGQGS CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCC VALGNGSTAGAAGLAGNVALGNGATAAASSGDVALGSGSVTAVAVGTPNAVINGTTYAFQ EEECCCCCCCCCCCCCCEEECCCCCCCCCCCCEEECCCCEEEEEECCCCEEECCEEEEEE GTTPTSTVSIGAPGAERTLTNVAAGRISGSSTDAVNGSQLFATNQAVDAIGTTLNNINVG CCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCEECC GGIKYFHANSTLADSSATGTDSVAIGPTSTATASSAIAAGSNANASGANASAIGTSSVAS CCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCHHEECCCCCCCCCCCCCCCCHHHHHH ALDATAMGFLSKASGQFSTAVGANANATALSSTAIGQNALASGVQATALGKQANAGASEA HHHHHHHHHHHHCCCCEEEECCCCCCCCEEEHHHCCHHHHHCCCEEEECCCCCCCCCCCE LALGANSTAGNAGDVALGSGSVTAVAVGTPNAVINGTTYAFQGINPASTVSIGAPGAERT EEECCCCCCCCCCCEEECCCCEEEEEECCCCEEECCCEEEEECCCCCCEEEECCCCHHHH LTNLAAGRISGSSTDAVNGSQLFATNQAVDAIGTTVNNISTGGGIKYFHANSTLADSSAT HHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCC GTDSVAIGPTSTATASSAIAAGSNANASGANASAIGTSSVASALDATAMGFLSKASGQFS CCCCEEECCCCCCCCCHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEE TAVGANANATALSSTAIGQNALASGVQATALGKQANASASDALALGANSTAGNAGDVALG EECCCCCCCCEEEHHHCCHHHHHCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCEEEC SGSVTAVAVGTPNAVINGTTYAFQGINPASTVSIGAPGAERTLTNLAAGRISGSSTDAVN CCCEEEEEECCCCEEECCCEEEEECCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCC GSQLFATNQAVDAIGTTVNNISTGGGIKYFHANSTLADSSATGTDSVAIGPTSTATASSA CCEEEECCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCHH IAAGSNANASGANASAIGTSSVASALDATAMGFLSKASGQFSTAVGANANATALSSTAIG EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEHHHCC QNALASGVQATALGKQANAGASDALALGANSTAGNAGDVALGSGSVTAVAVGTPNAVING HHHHHCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCEEECCCCEEEEEECCCCEEECC TTYAFQGINPASTVSIGAPGAERTLTNLAAGRISGSSTDAVNGSQLFATNQAVDAIGTTV CEEEEECCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHH NNLGGSVTNLGNVVNNIAGDTSTAYTDANGIGIRYARTNEAGLAQTDSFAQGLGSTAVGY HHCCCCHHHHHHHHHHHCCCCCCEEECCCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCC QASATGVSGLALGRGTLASIDGSVALGSGSVADRAVAPATGQIAAGPANFIQYNTTDKTL CCCCCCCCEEEECCCCEEECCCCEEECCCCCCCCCCCCCCCCEECCCCCEEEECCCCCEE LGAVSVGTATSYRQITNVADGTQAQDAVTVRQLQGVIASVSATSTKYFHANSTAGDSLAV EEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEE GAESVAVGPTTVVNGDNGIGIGNGAIVDQIAPGGTAIGQNAHVMLADGLALGTNSLASGI CCCEEECCCEEEEECCCCEECCCCCEEECCCCCCCCCCCCCEEEEECCEEECCHHHHHHH QSVALGAGAQSTFINSVALGAQSVTTVGAQAGYTAFALTAPQTSVGEVSIGGAGAERKLT HHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCCCCHHHH NVAAGSANTDAVNVSQLKGVSQNVANLFGGSTTVNPDGSITGPTYTIQGNNYSTVYDGFT HEECCCCCCCEEEHHHHHCHHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCCEECCCHH AVNNALTNISNGGGIKYFHANSTLADSTASGTDSVAIGPASVASGTNSLAAGNGSTATGQ HHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCHHHCCCCCCEECCCCCCCCCC GAVALGQGAKANNANDVALGSGSVTQTAVGTSSTVINGKTYAFAGTTPTGTVSVGDAGAE CCEEECCCCCCCCCCCEEECCCCCEEEECCCCCEEECCCEEEEECCCCCCEEEECCCCCH RTITNVAAGRVNAGSTDAINGSQLYATNTAVEDLKSGLGSLTQNAVTYDTNPDGSKKNSI HHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCEE TLQGGDVNAPVVISNVGPGVAGTDAVNVTQMNNRVDYAINTSNSYTDKVAATTLQQANNY EEECCCCCCCEEEECCCCCCCCCCEEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHCCC TDQKLSQLNSDLGGIRDEARQAAAIGLAAASLRYDDRPGKLSVAAGGGFWRDSSALAFGA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCCCCCCCCEEEEC GYTSEDGRIRGNVSGTAAGGHVGVGAGISFTLN CCCCCCCEEEECCCCCCCCCCEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3043229; 2761389; 2592347; 1548243; 12183532 [H]