| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472481
Identifier: 13472481
GI number: 13472481
Start: 2242355
End: 2244100
Strand: Direct
Name: 13472481
Synonym: mlr2793
Alternate gene names: NA
Gene position: 2242355-2244100 (Clockwise)
Preceding gene: 13472480
Following gene: 13472482
Centisome position: 31.87
GC content: 63.57
Gene sequence:
>1746_bases GTGCGCGAGACATTGGAGCGACTGCTTGCCAGCGAAACGTTCGGACGGTCCGAGCGCGCGCGCAAACTGATCCGTTACCT CGTCGAACGCGAGCAGGCCGGCGAAGCCGACAGGCTCAAGGGCTTTTCCATCGCCATGGATGTCTTCGGCAAGGACGGCG ATTTCGATCCGTCGACCGATGCCGTGGTGCGGGTGCAGGCAGGCAGGCTGCGCGAATTGCTGCAGCAGTATTTCGCCAAT GAAGGCATCGCTGAGCCGGTCCGCATCGCCATTCCACGCGGCGGCTACGTGCCGGCCTATGAGCTCAACGCGATCCGTCT GCCGGAAGTGGCCAAACCCGCCGAGCAGGCGGCAGCGGCAGCGGCTCCGGCCGAGCACCCCAGTGCCGCCGAGGATGCCG TTGCGCCCGACGCATCGTTGGCGCCGGCGGCGGCACCCGTGCCTTCGGTGGCGCGCCACCTCCGCTTCTTCTGGATGGCG ATCGCCGTGGTCATTGCCATGCTCGGCGTCCTGATCCTGCGCCAGGGCAGCGGCGCGCTGCTGGCCGGCGGCCATCTGCC GGCCACATTCGAGAGCGCCGGCCTGACCAGCAGCATTGCGCCGTCCCCGGTCAGCGAGGCCCTGCCGCTTGTCTACATCG CCGTCAAGGCCAGCGGCGCCGACGCCGGCCGCATCGCCGCGTCGTTGCGCGCCGGCCTGAGCGGCTTCGATACGATCGAC TTCATCGGCCGCGACACAGTCGACAAGACCGATCCGGTCAACAACCCCACCAGCTTCATATTCGACATTCTGCCCGGCCC GAACACAGGCGATATTACGATCGAACTGCAAAGCATGGCATCCGGACGGGTGCTTCTTTCACGCAATCTCACGCCGGCCG ACAGCACTCCTACAGCTATCGAGGACCGCGTTGCCGACATGCTGAGCTCGGCACTTCCCGCCTCGGGTACGATCTACAAC TATATCGAGCAGACGGGCACGCCAAACGGGCTGACCGAATGCTTGCTGCTCAACGACAAATATTATCTCGACCAGAATGC CAGAACCCACGAGGCCGCTTATCGCTGCCTCGAGACGTTAGCCAATTCCGGGGCGAAATCCTCGCTCGTCTATTCGGAAC TTGCGTCTCTACAGGTTGAGGCGGTCTCCGATCACTATGTTTATCCGCCCAACGCGACGATCGAAAAGGCCGTCGAGTTT GCCCACCGCGGCGTGCAGATGGGACCGACCAGTCCTTATGCGCATCGCGCCTATGGCTACGTCAGTTCGCGCCTCGGCAA TACGGACGAAGCGATCCGCTGGATGCGCAAGGCCTATGAACTCAATCCCTATGATCTCGGCATGGCCGCCGCTTACGGCT ACGGGCTGATCTTCGCCGGCCGATACGCCGAGGGAACGCCGATTCTTACCCATGCCGCCGAAACCTTCAGCGGCCACTCG ACATGGTGGGACTATGGGCTGTTCGTCGGTGATTTCATGCTGGGCGACATGAACAAGGCCATCGCGGCCAGCATGGCACT GAGAACGACGGCAACGAAATCGCATTATCTGGCGGCGCGTCTGATCGGCGCCAAGGCTGCCGGACAGGACAGTCTGGTCA CGACGCTGCTGAACGAGCTGAACACCAAGTTCCCGAAATTTGCCGCCGATCCGCGCTCGACCTTCGTCGAGCGGAAATAT CCGGCCGATCTGACCGATCGGCTGGTCCAAGCCCTGCGCGCCGCCGGGCTCGGCAGCGCGAGTTGA
Upstream 100 bases:
>100_bases ATACTTGTATGGTGGTGCGAGCCCTATATGATCGCATCTCAACCTGTGCCGACTTCGAGAGGATCGACACTTGCAGCATG CCACGCCTGCCGCCCCCGCA
Downstream 100 bases:
>100_bases TGTTCGGCAGGCCGGGACTATTTGGACCATGGAATTGTGCCGTGCTCGCGCGAGCACGGCACAACGCCAATCGGGCTGAT TTGCCGGCCAAGCCGTTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 581; Mature: 581
Protein sequence:
>581_residues MRETLERLLASETFGRSERARKLIRYLVEREQAGEADRLKGFSIAMDVFGKDGDFDPSTDAVVRVQAGRLRELLQQYFAN EGIAEPVRIAIPRGGYVPAYELNAIRLPEVAKPAEQAAAAAAPAEHPSAAEDAVAPDASLAPAAAPVPSVARHLRFFWMA IAVVIAMLGVLILRQGSGALLAGGHLPATFESAGLTSSIAPSPVSEALPLVYIAVKASGADAGRIAASLRAGLSGFDTID FIGRDTVDKTDPVNNPTSFIFDILPGPNTGDITIELQSMASGRVLLSRNLTPADSTPTAIEDRVADMLSSALPASGTIYN YIEQTGTPNGLTECLLLNDKYYLDQNARTHEAAYRCLETLANSGAKSSLVYSELASLQVEAVSDHYVYPPNATIEKAVEF AHRGVQMGPTSPYAHRAYGYVSSRLGNTDEAIRWMRKAYELNPYDLGMAAAYGYGLIFAGRYAEGTPILTHAAETFSGHS TWWDYGLFVGDFMLGDMNKAIAASMALRTTATKSHYLAARLIGAKAAGQDSLVTTLLNELNTKFPKFAADPRSTFVERKY PADLTDRLVQALRAAGLGSAS
Sequences:
>Translated_581_residues MRETLERLLASETFGRSERARKLIRYLVEREQAGEADRLKGFSIAMDVFGKDGDFDPSTDAVVRVQAGRLRELLQQYFAN EGIAEPVRIAIPRGGYVPAYELNAIRLPEVAKPAEQAAAAAAPAEHPSAAEDAVAPDASLAPAAAPVPSVARHLRFFWMA IAVVIAMLGVLILRQGSGALLAGGHLPATFESAGLTSSIAPSPVSEALPLVYIAVKASGADAGRIAASLRAGLSGFDTID FIGRDTVDKTDPVNNPTSFIFDILPGPNTGDITIELQSMASGRVLLSRNLTPADSTPTAIEDRVADMLSSALPASGTIYN YIEQTGTPNGLTECLLLNDKYYLDQNARTHEAAYRCLETLANSGAKSSLVYSELASLQVEAVSDHYVYPPNATIEKAVEF AHRGVQMGPTSPYAHRAYGYVSSRLGNTDEAIRWMRKAYELNPYDLGMAAAYGYGLIFAGRYAEGTPILTHAAETFSGHS TWWDYGLFVGDFMLGDMNKAIAASMALRTTATKSHYLAARLIGAKAAGQDSLVTTLLNELNTKFPKFAADPRSTFVERKY PADLTDRLVQALRAAGLGSAS >Mature_581_residues MRETLERLLASETFGRSERARKLIRYLVEREQAGEADRLKGFSIAMDVFGKDGDFDPSTDAVVRVQAGRLRELLQQYFAN EGIAEPVRIAIPRGGYVPAYELNAIRLPEVAKPAEQAAAAAAPAEHPSAAEDAVAPDASLAPAAAPVPSVARHLRFFWMA IAVVIAMLGVLILRQGSGALLAGGHLPATFESAGLTSSIAPSPVSEALPLVYIAVKASGADAGRIAASLRAGLSGFDTID FIGRDTVDKTDPVNNPTSFIFDILPGPNTGDITIELQSMASGRVLLSRNLTPADSTPTAIEDRVADMLSSALPASGTIYN YIEQTGTPNGLTECLLLNDKYYLDQNARTHEAAYRCLETLANSGAKSSLVYSELASLQVEAVSDHYVYPPNATIEKAVEF AHRGVQMGPTSPYAHRAYGYVSSRLGNTDEAIRWMRKAYELNPYDLGMAAAYGYGLIFAGRYAEGTPILTHAAETFSGHS TWWDYGLFVGDFMLGDMNKAIAASMALRTTATKSHYLAARLIGAKAAGQDSLVTTLLNELNTKFPKFAADPRSTFVERKY PADLTDRLVQALRAAGLGSAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62235; Mature: 62235
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRETLERLLASETFGRSERARKLIRYLVEREQAGEADRLKGFSIAMDVFGKDGDFDPSTD CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEECCCCCCCCCCCC AVVRVQAGRLRELLQQYFANEGIAEPVRIAIPRGGYVPAYELNAIRLPEVAKPAEQAAAA CEEEECHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEECCCEECCHHCCHHHHHHHH AAPAEHPSAAEDAVAPDASLAPAAAPVPSVARHLRFFWMAIAVVIAMLGVLILRQGSGAL CCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE LAGGHLPATFESAGLTSSIAPSPVSEALPLVYIAVKASGADAGRIAASLRAGLSGFDTID EECCCCCCCHHCCCCCCCCCCCCHHHCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCHHH FIGRDTVDKTDPVNNPTSFIFDILPGPNTGDITIELQSMASGRVLLSRNLTPADSTPTAI HCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCHHH EDRVADMLSSALPASGTIYNYIEQTGTPNGLTECLLLNDKYYLDQNARTHEAAYRCLETL HHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHH ANSGAKSSLVYSELASLQVEAVSDHYVYPPNATIEKAVEFAHRGVQMGPTSPYAHRAYGY HCCCCCHHHHHHHHHHHEEEECCCCEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH VSSRLGNTDEAIRWMRKAYELNPYDLGMAAAYGYGLIFAGRYAEGTPILTHAAETFSGHS HHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHEEECCCCCCCCHHHHHHHHCCCCC TWWDYGLFVGDFMLGDMNKAIAASMALRTTATKSHYLAARLIGAKAAGQDSLVTTLLNEL CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHH NTKFPKFAADPRSTFVERKYPADLTDRLVQALRAAGLGSAS HCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRETLERLLASETFGRSERARKLIRYLVEREQAGEADRLKGFSIAMDVFGKDGDFDPSTD CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEECCCCCCCCCCCC AVVRVQAGRLRELLQQYFANEGIAEPVRIAIPRGGYVPAYELNAIRLPEVAKPAEQAAAA CEEEECHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEECCCEECCHHCCHHHHHHHH AAPAEHPSAAEDAVAPDASLAPAAAPVPSVARHLRFFWMAIAVVIAMLGVLILRQGSGAL CCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE LAGGHLPATFESAGLTSSIAPSPVSEALPLVYIAVKASGADAGRIAASLRAGLSGFDTID EECCCCCCCHHCCCCCCCCCCCCHHHCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCHHH FIGRDTVDKTDPVNNPTSFIFDILPGPNTGDITIELQSMASGRVLLSRNLTPADSTPTAI HCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCHHH EDRVADMLSSALPASGTIYNYIEQTGTPNGLTECLLLNDKYYLDQNARTHEAAYRCLETL HHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHH ANSGAKSSLVYSELASLQVEAVSDHYVYPPNATIEKAVEFAHRGVQMGPTSPYAHRAYGY HCCCCCHHHHHHHHHHHEEEECCCCEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH VSSRLGNTDEAIRWMRKAYELNPYDLGMAAAYGYGLIFAGRYAEGTPILTHAAETFSGHS HHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHEEECCCCCCCCHHHHHHHHCCCCC TWWDYGLFVGDFMLGDMNKAIAASMALRTTATKSHYLAARLIGAKAAGQDSLVTTLLNEL CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHH NTKFPKFAADPRSTFVERKYPADLTDRLVQALRAAGLGSAS HCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA