| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472457
Identifier: 13472457
GI number: 13472457
Start: 2214989
End: 2216296
Strand: Direct
Name: 13472457
Synonym: mlr2759
Alternate gene names: NA
Gene position: 2214989-2216296 (Clockwise)
Preceding gene: 13472456
Following gene: 13472458
Centisome position: 31.48
GC content: 61.16
Gene sequence:
>1308_bases ATGAGCCACCCCGCCAAAAAACCCGACCTCTTGCGCGACAACGAACTCATCTACGGCCGTCTGCTCATCGTCGACGAGCC GCATCTCATCCAGCGCTATAACAAGGCGCTGGCCGCGTTCGGCCTGCCTCCCACCAAGCTGAAGAGCTTCCAGATCGACC GCACCGGCTTCTCGCCCGAGATCGCCGATGAATGCGGCGACCCCGACTATCTCGATCCCAACGAGGTCAATCGCCGCTTC ATCATCCTGACGCCGTCGCAGATCGACCTGCCGGTGGTGCACACAGCCTTCTCCAACACCTCGCAGCTGATGTTCGAGTT CATGTCCAAGAACCAGCGCGCCATCGACGCGCTGACCATCAAGGACGTCATCTACGGCGAGATCGAGGATTCCGTTCCCA AGGTCAACGACATCGAGGACTTGCTGTCGATCAACCAGGTCGAGTTCAAGGTGCTGTCGGCCGAGGATGTGCTGGGCAAG GCCGCTGAACTCGGCAAGCTCGTCGACCGGCTGAGGCAGGAGCCCGATGCCTGGCGCGACGATGCCATGCTGACGCGCAT GGTGGAGCTGGCGAAAATCTGCGGCGACATCAGAGAGAACGCGCTGGTGCCAGACCAGGTGATCTTCCGCCACAACGCCT ACTGGACCAGCCATTTCGGCGGGCTCTACGTGTTCGTCGATCCCGACATGACGACGGTGATCAGCGATCCTGCGGCCCCC GGCTTCCGTCGCTCGCGACCGTGGCAGGTGAGCTATCTCTCGATCAACGACGCCGACAAGGTGTTCAAGTTCCTGGCCAG CACCGGCCGCATCGAACTGCCGCGCGCCTCCTGGATAGAAGCGTCCGGCTATCTCGAGCACCGCGCCGAGATGGTGGTGC GCGCGCTGATCCGCGACACCGAGCCGAACCGCAATCTGACCGATGTCGACAAGGTCTGGCTGCAGACGTGGATCCAGAGC CATGCCGACCTGATCACCAAGGACGGCAATTTTCCTTTCCTCAACGCCGCCAAGCGCGAGATCGCCCAGCTTGGCCATCT CAAGATCGAGGATGTGTTCCCGCAGCAGCGCTTCCTGGTGGTCCGCGCCAAGCCGGACCATCCCGACGCCTGGCTGACCA ACCGGCTGATCTCGGATTTCGTGCCGACCGACTTCGTCTCGCGCTACATCTTCAACAAGCAGGGCTTCTACAAGGACTAT GACGGCTTCAGCGACGCCTGGAGATCGCATGTTGTGGACGTTCTGAAAACCACATATTTGAAGGACAAGGTGGCGTTTCG CACACGCCTCTACGGCCTGACTGACTAG
Upstream 100 bases:
>100_bases GAGGGCGGCGCGCGAGATGGAGGAGATGAAGAAGAAGGGCAATTGGAATGCGTGAGCCACACCGGCCTTTCCTTCTCCCC GCGAACGGGGAGAAGGCAAG
Downstream 100 bases:
>100_bases AACGAAATGAACCGACATTTCGTTCTAACTTATTGTTTTAGCGCATGATTTTATCCGAAAGTCTGCAGCTTTTTGGCATC ATGCTTTGAGGGGGTGACAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MSHPAKKPDLLRDNELIYGRLLIVDEPHLIQRYNKALAAFGLPPTKLKSFQIDRTGFSPEIADECGDPDYLDPNEVNRRF IILTPSQIDLPVVHTAFSNTSQLMFEFMSKNQRAIDALTIKDVIYGEIEDSVPKVNDIEDLLSINQVEFKVLSAEDVLGK AAELGKLVDRLRQEPDAWRDDAMLTRMVELAKICGDIRENALVPDQVIFRHNAYWTSHFGGLYVFVDPDMTTVISDPAAP GFRRSRPWQVSYLSINDADKVFKFLASTGRIELPRASWIEASGYLEHRAEMVVRALIRDTEPNRNLTDVDKVWLQTWIQS HADLITKDGNFPFLNAAKREIAQLGHLKIEDVFPQQRFLVVRAKPDHPDAWLTNRLISDFVPTDFVSRYIFNKQGFYKDY DGFSDAWRSHVVDVLKTTYLKDKVAFRTRLYGLTD
Sequences:
>Translated_435_residues MSHPAKKPDLLRDNELIYGRLLIVDEPHLIQRYNKALAAFGLPPTKLKSFQIDRTGFSPEIADECGDPDYLDPNEVNRRF IILTPSQIDLPVVHTAFSNTSQLMFEFMSKNQRAIDALTIKDVIYGEIEDSVPKVNDIEDLLSINQVEFKVLSAEDVLGK AAELGKLVDRLRQEPDAWRDDAMLTRMVELAKICGDIRENALVPDQVIFRHNAYWTSHFGGLYVFVDPDMTTVISDPAAP GFRRSRPWQVSYLSINDADKVFKFLASTGRIELPRASWIEASGYLEHRAEMVVRALIRDTEPNRNLTDVDKVWLQTWIQS HADLITKDGNFPFLNAAKREIAQLGHLKIEDVFPQQRFLVVRAKPDHPDAWLTNRLISDFVPTDFVSRYIFNKQGFYKDY DGFSDAWRSHVVDVLKTTYLKDKVAFRTRLYGLTD >Mature_434_residues SHPAKKPDLLRDNELIYGRLLIVDEPHLIQRYNKALAAFGLPPTKLKSFQIDRTGFSPEIADECGDPDYLDPNEVNRRFI ILTPSQIDLPVVHTAFSNTSQLMFEFMSKNQRAIDALTIKDVIYGEIEDSVPKVNDIEDLLSINQVEFKVLSAEDVLGKA AELGKLVDRLRQEPDAWRDDAMLTRMVELAKICGDIRENALVPDQVIFRHNAYWTSHFGGLYVFVDPDMTTVISDPAAPG FRRSRPWQVSYLSINDADKVFKFLASTGRIELPRASWIEASGYLEHRAEMVVRALIRDTEPNRNLTDVDKVWLQTWIQSH ADLITKDGNFPFLNAAKREIAQLGHLKIEDVFPQQRFLVVRAKPDHPDAWLTNRLISDFVPTDFVSRYIFNKQGFYKDYD GFSDAWRSHVVDVLKTTYLKDKVAFRTRLYGLTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49920; Mature: 49789
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHPAKKPDLLRDNELIYGRLLIVDEPHLIQRYNKALAAFGLPPTKLKSFQIDRTGFSPE CCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHCCEEEECCCCCCH IADECGDPDYLDPNEVNRRFIILTPSQIDLPVVHTAFSNTSQLMFEFMSKNQRAIDALTI HHHHCCCCCCCCHHHCCCEEEEECCCCCCCCEEEHHHCCHHHHHHHHHHCCCHHHHHHHH KDVIYGEIEDSVPKVNDIEDLLSINQVEFKVLSAEDVLGKAAELGKLVDRLRQEPDAWRD HHHHHHHHHHCCCCCCCHHHHHCCCHHEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCHH DAMLTRMVELAKICGDIRENALVPDQVIFRHNAYWTSHFGGLYVFVDPDMTTVISDPAAP HHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCEEEEECCCCEEEECCCCCC GFRRSRPWQVSYLSINDADKVFKFLASTGRIELPRASWIEASGYLEHRAEMVVRALIRDT CCCCCCCCEEEEEEECCHHHHHHHHHCCCCEECCCCHHHCCCHHHHHHHHHHHHHHHHCC EPNRNLTDVDKVWLQTWIQSHADLITKDGNFPFLNAAKREIAQLGHLKIEDVFPQQRFLV CCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCEEEHHCCCCCEEEE VRAKPDHPDAWLTNRLISDFVPTDFVSRYIFNKQGFYKDYDGFSDAWRSHVVDVLKTTYL EEECCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH KDKVAFRTRLYGLTD HHHHHHHHHHCCCCC >Mature Secondary Structure SHPAKKPDLLRDNELIYGRLLIVDEPHLIQRYNKALAAFGLPPTKLKSFQIDRTGFSPE CCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHCCEEEECCCCCCH IADECGDPDYLDPNEVNRRFIILTPSQIDLPVVHTAFSNTSQLMFEFMSKNQRAIDALTI HHHHCCCCCCCCHHHCCCEEEEECCCCCCCCEEEHHHCCHHHHHHHHHHCCCHHHHHHHH KDVIYGEIEDSVPKVNDIEDLLSINQVEFKVLSAEDVLGKAAELGKLVDRLRQEPDAWRD HHHHHHHHHHCCCCCCCHHHHHCCCHHEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCHH DAMLTRMVELAKICGDIRENALVPDQVIFRHNAYWTSHFGGLYVFVDPDMTTVISDPAAP HHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCEEEEECCCCEEEECCCCCC GFRRSRPWQVSYLSINDADKVFKFLASTGRIELPRASWIEASGYLEHRAEMVVRALIRDT CCCCCCCCEEEEEEECCHHHHHHHHHCCCCEECCCCHHHCCCHHHHHHHHHHHHHHHHCC EPNRNLTDVDKVWLQTWIQSHADLITKDGNFPFLNAAKREIAQLGHLKIEDVFPQQRFLV CCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCEEEHHCCCCCEEEE VRAKPDHPDAWLTNRLISDFVPTDFVSRYIFNKQGFYKDYDGFSDAWRSHVVDVLKTTYL EEECCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH KDKVAFRTRLYGLTD HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA