Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13472458

Identifier: 13472458

GI number: 13472458

Start: 2216401

End: 2217525

Strand: Direct

Name: 13472458

Synonym: mlr2761

Alternate gene names: NA

Gene position: 2216401-2217525 (Clockwise)

Preceding gene: 13472457

Following gene: 13472459

Centisome position: 31.5

GC content: 61.78

Gene sequence:

>1125_bases
ATGCTCGATCCGATCGTGAACTTCTTCGTCAGGATTTTCCAATGGATCGGCCGCGGCATCGGCCTTTTGATCGGCGCCAT
CCTGTGGCCGTTCCTGTGGGCCGGCCGCTGGTACACGCAGCGTGGCTGGATCCTCAAGGCCGTGCTCGGCCTGGCCCTGC
TGGTGCTGATCGGCCTCTACGCCAACTTCTTCTATGCCACCCAGTGGTGGAACAATTTCAACCCGAACTATCCGGACACC
TATACGTTCGAGAAGCGCAATGTTTCCGCCGGTGAGCAGGTGGCCGCCGGCACCGGCACCGACACGGCAAAGACCTGTGG
CAACTCCGGCATTGCCCAGATCGCGGCGGACCTGACCGACTTCAACGTCAACCAGAATGCCTGGATCTCGTCGATGATCC
TCTACAAGCTCGGCCTGTTCGGCATCGACTGGGACAACACGCCGTGGATGGACAACAAGGCCTCCTTCCAGCGCGGCATC
AACCAGGCTGTGCGGCGCACGGCGACCGAACTCGCCGACAATCTCGGCCGCGTGCGCACGACCTCGCAGATCGATGCCGA
TCTGCAGGATGCGCGCGGCAATCTGCAGTTCGACGAATACACCTGGTATTTCGGCGTCAGCCCGTTCGGCCCGAAGACGC
CGACCCCGAGCTACTATCGCGACGCGGTGCGCAAGCTGCGCTCGTTCAATGCCCGCCTCGCCACCTGCCAGGCCACTTTC
GATGCCCGCGCCGACAATCTGAAGCAGTATATCGACCGCATCGCATCGGACATCGGCTCGACCTCCGCCATCCTCAAGGA
GCGTGCCGAGAACCACAACAATGGCTGGTTCGACACCCGCGCCGACGACCGCTACTGGTTCGCCTATGGTCAGCTCTATG
CCTATTACGGCCTGATGAAGGGCGCCCAGGCCGACTTCGAGGACGTCATCAAGGAAAAGCACCTGCAGAGCCTGTGGGAC
ACGATGGACGCGCAATTCGTCTCGGCCCTGCGCATCCAGCCCTTCATCATCGCCAATGGCCGCGAGGATGGCTGGCTGCT
GCCGACGCATCTGACGACGATGGGCTTCTACATCCTGCGCGTGCGCTCCAACATGGTCGAAATCAGCAACGTGCTGACGC
AATAG

Upstream 100 bases:

>100_bases
AAATGAACCGACATTTCGTTCTAACTTATTGTTTTAGCGCATGATTTTATCCGAAAGTCTGCAGCTTTTTGGCATCATGC
TTTGAGGGGGTGACACAGCC

Downstream 100 bases:

>100_bases
CGTTCGCCATTCGCAATGCATGTCGCCCAAAAGTGGTCCCGGTTTTGGGGGAACGACATGCATAAGAACAAAAGGCTAAA
GCGCGAAGCGCTTTAGAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MLDPIVNFFVRIFQWIGRGIGLLIGAILWPFLWAGRWYTQRGWILKAVLGLALLVLIGLYANFFYATQWWNNFNPNYPDT
YTFEKRNVSAGEQVAAGTGTDTAKTCGNSGIAQIAADLTDFNVNQNAWISSMILYKLGLFGIDWDNTPWMDNKASFQRGI
NQAVRRTATELADNLGRVRTTSQIDADLQDARGNLQFDEYTWYFGVSPFGPKTPTPSYYRDAVRKLRSFNARLATCQATF
DARADNLKQYIDRIASDIGSTSAILKERAENHNNGWFDTRADDRYWFAYGQLYAYYGLMKGAQADFEDVIKEKHLQSLWD
TMDAQFVSALRIQPFIIANGREDGWLLPTHLTTMGFYILRVRSNMVEISNVLTQ

Sequences:

>Translated_374_residues
MLDPIVNFFVRIFQWIGRGIGLLIGAILWPFLWAGRWYTQRGWILKAVLGLALLVLIGLYANFFYATQWWNNFNPNYPDT
YTFEKRNVSAGEQVAAGTGTDTAKTCGNSGIAQIAADLTDFNVNQNAWISSMILYKLGLFGIDWDNTPWMDNKASFQRGI
NQAVRRTATELADNLGRVRTTSQIDADLQDARGNLQFDEYTWYFGVSPFGPKTPTPSYYRDAVRKLRSFNARLATCQATF
DARADNLKQYIDRIASDIGSTSAILKERAENHNNGWFDTRADDRYWFAYGQLYAYYGLMKGAQADFEDVIKEKHLQSLWD
TMDAQFVSALRIQPFIIANGREDGWLLPTHLTTMGFYILRVRSNMVEISNVLTQ
>Mature_374_residues
MLDPIVNFFVRIFQWIGRGIGLLIGAILWPFLWAGRWYTQRGWILKAVLGLALLVLIGLYANFFYATQWWNNFNPNYPDT
YTFEKRNVSAGEQVAAGTGTDTAKTCGNSGIAQIAADLTDFNVNQNAWISSMILYKLGLFGIDWDNTPWMDNKASFQRGI
NQAVRRTATELADNLGRVRTTSQIDADLQDARGNLQFDEYTWYFGVSPFGPKTPTPSYYRDAVRKLRSFNARLATCQATF
DARADNLKQYIDRIASDIGSTSAILKERAENHNNGWFDTRADDRYWFAYGQLYAYYGLMKGAQADFEDVIKEKHLQSLWD
TMDAQFVSALRIQPFIIANGREDGWLLPTHLTTMGFYILRVRSNMVEISNVLTQ

Specific function: Unknown

COG id: COG5345

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42683; Mature: 42683

Theoretical pI: Translated: 7.48; Mature: 7.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDPIVNFFVRIFQWIGRGIGLLIGAILWPFLWAGRWYTQRGWILKAVLGLALLVLIGLY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
ANFFYATQWWNNFNPNYPDTYTFEKRNVSAGEQVAAGTGTDTAKTCGNSGIAQIAADLTD
HHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHH
FNVNQNAWISSMILYKLGLFGIDWDNTPWMDNKASFQRGINQAVRRTATELADNLGRVRT
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TSQIDADLQDARGNLQFDEYTWYFGVSPFGPKTPTPSYYRDAVRKLRSFNARLATCQATF
HHHHCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
DARADNLKQYIDRIASDIGSTSAILKERAENHNNGWFDTRADDRYWFAYGQLYAYYGLMK
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHC
GAQADFEDVIKEKHLQSLWDTMDAQFVSALRIQPFIIANGREDGWLLPTHLTTMGFYILR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHH
VRSNMVEISNVLTQ
HHHHHHHHHHHHCC
>Mature Secondary Structure
MLDPIVNFFVRIFQWIGRGIGLLIGAILWPFLWAGRWYTQRGWILKAVLGLALLVLIGLY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
ANFFYATQWWNNFNPNYPDTYTFEKRNVSAGEQVAAGTGTDTAKTCGNSGIAQIAADLTD
HHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHH
FNVNQNAWISSMILYKLGLFGIDWDNTPWMDNKASFQRGINQAVRRTATELADNLGRVRT
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TSQIDADLQDARGNLQFDEYTWYFGVSPFGPKTPTPSYYRDAVRKLRSFNARLATCQATF
HHHHCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
DARADNLKQYIDRIASDIGSTSAILKERAENHNNGWFDTRADDRYWFAYGQLYAYYGLMK
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHC
GAQADFEDVIKEKHLQSLWDTMDAQFVSALRIQPFIIANGREDGWLLPTHLTTMGFYILR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHH
VRSNMVEISNVLTQ
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA