Click here to switch to the map view.

The map label for this gene is 13472452

Identifier: 13472452

GI number: 13472452

Start: 2209217

End: 2209606

Strand: Direct

Name: 13472452

Synonym: mlr2752

Alternate gene names: NA

Gene position: 2209217-2209606 (Clockwise)

Preceding gene: 13472451

Following gene: 13472453

Centisome position: 31.4

GC content: 60.77

Gene sequence:

>390_bases
ATGCTTCGAGCCGTTTCCTCAGCCAGCCTTCTTCTCATTGCCACTTCCATTGCCGCCCATGCCGGCGACGACCCGGTGCA
AGGCAAGCACGTCTTCAACCGCTGCGTGGCCTGCCATGAGGCGGCCACCGACCGCGACAAGGTCGGCCCGCATCTGAAGG
GTGTGGTCGGACGCACCGCCGGCACAGCCGAGAGCTTCCTTGGCCATTATTCCGAAGCCATGAAGAGTGCGGGCGCTGCC
GGTCTCGTCTGGGACGAGGCAAATCTCACCGAATATCTCAGGGCACCCAAGCTCAAGGTTCCCGGCAACAAAATGGCTTT
TGGTGGCCTGACGAATGATGACGACATCGCCAATGTCATCGCCTATCTGAAGGCCGATCCGAAGCCCTGA

Upstream 100 bases:

>100_bases
GCACGGGATTGGGTGCGACCGGCCCCCACTCGCCACGGTGCAGCGTTTGTTAAGGCCTCGGCCCTATAAGGCCGTCAGCC
AGAGCTCTCCGGGGTCAGCC

Downstream 100 bases:

>100_bases
GTGCGCGTCGGTGCGGCAGGCTTCGACTGATATGCTCGCCTGCAACCGGTTCAATTCCCTGTCGAATTCAGCATTTCCGC
GCCGGCGGTGGCTGACTGTT

Product: cytochrome c2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MLRAVSSASLLLIATSIAAHAGDDPVQGKHVFNRCVACHEAATDRDKVGPHLKGVVGRTAGTAESFLGHYSEAMKSAGAA
GLVWDEANLTEYLRAPKLKVPGNKMAFGGLTNDDDIANVIAYLKADPKP

Sequences:

>Translated_129_residues
MLRAVSSASLLLIATSIAAHAGDDPVQGKHVFNRCVACHEAATDRDKVGPHLKGVVGRTAGTAESFLGHYSEAMKSAGAA
GLVWDEANLTEYLRAPKLKVPGNKMAFGGLTNDDDIANVIAYLKADPKP
>Mature_129_residues
MLRAVSSASLLLIATSIAAHAGDDPVQGKHVFNRCVACHEAATDRDKVGPHLKGVVGRTAGTAESFLGHYSEAMKSAGAA
GLVWDEANLTEYLRAPKLKVPGNKMAFGGLTNDDDIANVIAYLKADPKP

Specific function: Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

Organism=Homo sapiens, GI11128019, Length=103, Percent_Identity=38.8349514563107, Blast_Score=71, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17539604, Length=104, Percent_Identity=42.3076923076923, Blast_Score=82, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17566554, Length=104, Percent_Identity=39.4230769230769, Blast_Score=77, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6322508, Length=92, Percent_Identity=43.4782608695652, Blast_Score=77, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6320796, Length=91, Percent_Identity=37.3626373626374, Blast_Score=66, Evalue=1e-12,
Organism=Drosophila melanogaster, GI17137228, Length=107, Percent_Identity=42.9906542056075, Blast_Score=80, Evalue=2e-16,
Organism=Drosophila melanogaster, GI17137204, Length=105, Percent_Identity=41.9047619047619, Blast_Score=80, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 13513; Mature: 13513

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRAVSSASLLLIATSIAAHAGDDPVQGKHVFNRCVACHEAATDRDKVGPHLKGVVGRTA
CCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCHHHHHHCCCC
GTAESFLGHYSEAMKSAGAAGLVWDEANLTEYLRAPKLKVPGNKMAFGGLTNDDDIANVI
CCHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHH
AYLKADPKP
HHHHCCCCC
>Mature Secondary Structure
MLRAVSSASLLLIATSIAAHAGDDPVQGKHVFNRCVACHEAATDRDKVGPHLKGVVGRTA
CCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCHHHHHHCCCC
GTAESFLGHYSEAMKSAGAAGLVWDEANLTEYLRAPKLKVPGNKMAFGGLTNDDDIANVI
CCHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHH
AYLKADPKP
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA