| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is yibF [C]
Identifier: 13472368
GI number: 13472368
Start: 2136263
End: 2136877
Strand: Reverse
Name: yibF [C]
Synonym: mll2639
Alternate gene names: 13472368
Gene position: 2136877-2136263 (Counterclockwise)
Preceding gene: 13472372
Following gene: 13472360
Centisome position: 30.37
GC content: 64.07
Gene sequence:
>615_bases ATGATCCTCTATTATCAGACCCACTCACCTTTCGCGCGTAAGGCGCTGGTCTTCGCGCATGAGGCCGGCATTGCCGATCG GCTCGAGGTCATCCATCACGAGACCAGTCCGACCTTGCGCAACGCTCGTGTCTGCGCCGAAAACCCGCTCGGCAAGGTGC CGGTATTGCTGCGGCCCGGCGCATCGGCGATCTTCGATTCCGATGTCATCTGCGCCTATCTCGACACGCTGCATGATGGC CGCAAGTTGCTGCCGCAGGACGGCGAGACACGCTGGCAGGCGTTGCGGCTGCAATCGGTCGCTCAAGGCCTGGCGCAGAC GGGCATCGCCTTGCGCTGGGAGACGGAAAGGAGACCCGAACCGCTGCGATACGGCGCTCTTGCGCAGGGATACCGGGACA AGATCGAGGCGAGCTACGACTGGATCGAAGGCACCCTGGACGACGAAGCGCCGCTGCATGTCGGCCATATAGCGCTCGCC ACCACGCTGTCCTGGATGGCGTTCCGCGATCTTCCGCCGTTTCGCGCGCGGGCGCGGCTGACGCGCTGGTTCGAGGCTTT CGAAAAGCGTGCGTCGATGCAGGCGACGCCGCTTTCCGGCGACACGCATGATTGA
Upstream 100 bases:
>100_bases GCAACGGACTTGCGCCTGCGGCCCTCAATCAGAGCGCAATTCTCGCAGCCCGCGGGCTAGAACGGGTGGATCACGCGCCT CCTCAAACCCTGAGACGACC
Downstream 100 bases:
>100_bases GCAATGGTCGCCCCATGGTGGCTCGCATCGATATTTTCCGACCGCATGGTCAGGGCGCCCTGCGTATCCGCAAGCCGTTT TGCGCGTTGATGACGATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Glutathione S-Transferase; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase-Like; Glutathione S-Transferase N-Terminal Domain-Containing; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione Transferase; Glutathione S-Transferase Related Protein; Glutathione S-Transferase N- Domain; Glutathione S-Transferase With Thioredoxin-Like Domain; Gst Protein; Glutathione S-Transferase C-Terminal Domain-Containing; Glutathione S-Transferase Domain
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MILYYQTHSPFARKALVFAHEAGIADRLEVIHHETSPTLRNARVCAENPLGKVPVLLRPGASAIFDSDVICAYLDTLHDG RKLLPQDGETRWQALRLQSVAQGLAQTGIALRWETERRPEPLRYGALAQGYRDKIEASYDWIEGTLDDEAPLHVGHIALA TTLSWMAFRDLPPFRARARLTRWFEAFEKRASMQATPLSGDTHD
Sequences:
>Translated_204_residues MILYYQTHSPFARKALVFAHEAGIADRLEVIHHETSPTLRNARVCAENPLGKVPVLLRPGASAIFDSDVICAYLDTLHDG RKLLPQDGETRWQALRLQSVAQGLAQTGIALRWETERRPEPLRYGALAQGYRDKIEASYDWIEGTLDDEAPLHVGHIALA TTLSWMAFRDLPPFRARARLTRWFEAFEKRASMQATPLSGDTHD >Mature_204_residues MILYYQTHSPFARKALVFAHEAGIADRLEVIHHETSPTLRNARVCAENPLGKVPVLLRPGASAIFDSDVICAYLDTLHDG RKLLPQDGETRWQALRLQSVAQGLAQTGIALRWETERRPEPLRYGALAQGYRDKIEASYDWIEGTLDDEAPLHVGHIALA TTLSWMAFRDLPPFRARARLTRWFEAFEKRASMQATPLSGDTHD
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790018, Length=202, Percent_Identity=28.7128712871287, Blast_Score=67, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23015; Mature: 23015
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILYYQTHSPFARKALVFAHEAGIADRLEVIHHETSPTLRNARVCAENPLGKVPVLLRPG CEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCEEECCC ASAIFDSDVICAYLDTLHDGRKLLPQDGETRWQALRLQSVAQGLAQTGIALRWETERRPE CCHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC PLRYGALAQGYRDKIEASYDWIEGTLDDEAPLHVGHIALATTLSWMAFRDLPPFRARARL CCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHH TRWFEAFEKRASMQATPLSGDTHD HHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MILYYQTHSPFARKALVFAHEAGIADRLEVIHHETSPTLRNARVCAENPLGKVPVLLRPG CEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCEEECCC ASAIFDSDVICAYLDTLHDGRKLLPQDGETRWQALRLQSVAQGLAQTGIALRWETERRPE CCHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC PLRYGALAQGYRDKIEASYDWIEGTLDDEAPLHVGHIALATTLSWMAFRDLPPFRARARL CCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHH TRWFEAFEKRASMQATPLSGDTHD HHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA