| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472350
Identifier: 13472350
GI number: 13472350
Start: 2114744
End: 2115367
Strand: Reverse
Name: 13472350
Synonym: mll2616
Alternate gene names: NA
Gene position: 2115367-2114744 (Counterclockwise)
Preceding gene: 13472351
Following gene: 13472346
Centisome position: 30.06
GC content: 62.34
Gene sequence:
>624_bases ATGCGCATGGTGTCAGCGGCAGCCCTCACTCTCATCGCGCTGTGCGCTGGACCGGCCGGAGCCGAGGATCTCAAGGCCTT CAAGCTGACCATCGACGGCGTGGCGGTCGATATCGATCCCGGTGAGAGCACGACCATTACGCTGCCCGGCGGCAAGCAGA GCAAGGTGACGCTCGAGCGCAACGACTTCGCCACCTTTTCCGGCGACAGTTTCTCCTTCGTCCATCCGAGCGGCATTTCG GTGACCAAGACCGATCTCGGCGAGAACATCACGCAATATCTGATGGCTTCGGCGCTCGGCACGATTGTCGTGGTGCAGGA ATATGGCAAGATGAACCCGGTGTCGCTCAACCAGCTGATGCTGCAGGAGATGACCAGGGAATCGGTGCAGGCCGGCGCCG AACTGACGCAGCAGCCGACGACGCGCAAGCTCGCCGACGGTAAGGAGCTGACCGGCATCCGCGCCGAGGTGAAGACGCGC ACCGACACCGCGTATTTCGAGATCGTCGGCTACGGCCTCTCCGATCAGGGGCTGTTGTTCGTCACGCGCGTCGGCAGCGA GGACCTGGCCACCGAACAGCCGCTGATCGACAAGTTTTGGGAGAGCCTGAAGGTCAAGATGTAG
Upstream 100 bases:
>100_bases GGCGGCGAAACGGCACTATGACCCTACGGAACTGTTTTCCTCGACCTTCTACCGTGGCATCAAGGCGCTGAGCGGGGTTG CATAAGCAGGAGAATAGTCG
Downstream 100 bases:
>100_bases GGGGCTGGGGCAGTGTCTCAGTTTGGATTTCGGCTGTGGGTCGAAAGGCGCCTCGTCTATTGGCATATTCTCGAGAACGA ATTGCACAGCATTGGTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MRMVSAAALTLIALCAGPAGAEDLKAFKLTIDGVAVDIDPGESTTITLPGGKQSKVTLERNDFATFSGDSFSFVHPSGIS VTKTDLGENITQYLMASALGTIVVVQEYGKMNPVSLNQLMLQEMTRESVQAGAELTQQPTTRKLADGKELTGIRAEVKTR TDTAYFEIVGYGLSDQGLLFVTRVGSEDLATEQPLIDKFWESLKVKM
Sequences:
>Translated_207_residues MRMVSAAALTLIALCAGPAGAEDLKAFKLTIDGVAVDIDPGESTTITLPGGKQSKVTLERNDFATFSGDSFSFVHPSGIS VTKTDLGENITQYLMASALGTIVVVQEYGKMNPVSLNQLMLQEMTRESVQAGAELTQQPTTRKLADGKELTGIRAEVKTR TDTAYFEIVGYGLSDQGLLFVTRVGSEDLATEQPLIDKFWESLKVKM >Mature_207_residues MRMVSAAALTLIALCAGPAGAEDLKAFKLTIDGVAVDIDPGESTTITLPGGKQSKVTLERNDFATFSGDSFSFVHPSGIS VTKTDLGENITQYLMASALGTIVVVQEYGKMNPVSLNQLMLQEMTRESVQAGAELTQQPTTRKLADGKELTGIRAEVKTR TDTAYFEIVGYGLSDQGLLFVTRVGSEDLATEQPLIDKFWESLKVKM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22287; Mature: 22287
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMVSAAALTLIALCAGPAGAEDLKAFKLTIDGVAVDIDPGESTTITLPGGKQSKVTLER CCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEEECCCCCEEEEECCCCCCEEEEEC NDFATFSGDSFSFVHPSGISVTKTDLGENITQYLMASALGTIVVVQEYGKMNPVSLNQLM CCCEEECCCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHH LQEMTRESVQAGAELTQQPTTRKLADGKELTGIRAEVKTRTDTAYFEIVGYGLSDQGLLF HHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEE VTRVGSEDLATEQPLIDKFWESLKVKM EEECCCCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MRMVSAAALTLIALCAGPAGAEDLKAFKLTIDGVAVDIDPGESTTITLPGGKQSKVTLER CCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEEECCCCCEEEEECCCCCCEEEEEC NDFATFSGDSFSFVHPSGISVTKTDLGENITQYLMASALGTIVVVQEYGKMNPVSLNQLM CCCEEECCCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHH LQEMTRESVQAGAELTQQPTTRKLADGKELTGIRAEVKTRTDTAYFEIVGYGLSDQGLLF HHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEE VTRVGSEDLATEQPLIDKFWESLKVKM EEECCCCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA