| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472346
Identifier: 13472346
GI number: 13472346
Start: 2110953
End: 2111465
Strand: Reverse
Name: 13472346
Synonym: mll2610
Alternate gene names: NA
Gene position: 2111465-2110953 (Counterclockwise)
Preceding gene: 13472350
Following gene: 13472344
Centisome position: 30.01
GC content: 59.65
Gene sequence:
>513_bases GTGGTCGTGTATGCGCTTCGACAGCCAGAAGCCGACATAGACGGCGAAGCCGCCGATAACGAGATGCGGCAGGTTGGCGA AGAAGCGGGTGGGGAACTCGATGTCGTTGAGGGAGCGGAAACCGTTGATGAAGATGCCGGCATCGAGGCAGCCGGAGCCG GTGATCAGCCCGAGCACGCCGTCGAACAGATAGACCGATCCGAACAGCTTGAAATAGAACACCGCCTGGCGATGCGAGAT GAAGGCGGCGGCCAGCGCCCAGACGCCGGAGAAGGCGTGCAGCAGGTCGTCATACCATTGCAGCGAGAACAGGCCGAACA GATTGCCGTTGGCATCGTTGAACGCCGGTATGTAGCCGATGGCGACGACGGCGAAGAACAGGAAAGCATAGGCAACGGCA AGCTTCTGGATCAGCGTCATGAAGTATCCCCCTCCAATTGCCGTCGAACGTTAGCCGATTTCGCCGCCGGTTGCAGCCCC AACCGGAAACACCGTAAAAATTGCGCGGGATAG
Upstream 100 bases:
>100_bases CGATCGGGATGAGGATGATGATGACGATCAGCCAGACGATCGTCTTGATAATGCGCTTCAGCCAGCGGAACAGCAACATG GCCGGTCAGGCCGTGGCGAA
Downstream 100 bases:
>100_bases GAAAACGACAGTCGGCGCTGGGATTTCTCCCAGCGCCTCCCTGTCAGATCAGGACACGGTCGCGGCAGCAACTTCCGCAA AGTCGTCGCGCCATGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MVVYALRQPEADIDGEAADNEMRQVGEEAGGELDVVEGAETVDEDAGIEAAGAGDQPEHAVEQIDRSEQLEIEHRLAMRD EGGGQRPDAGEGVQQVVIPLQREQAEQIAVGIVERRYVADGDDGEEQESIGNGKLLDQRHEVSPSNCRRTLADFAAGCSP NRKHRKNCAG
Sequences:
>Translated_170_residues MVVYALRQPEADIDGEAADNEMRQVGEEAGGELDVVEGAETVDEDAGIEAAGAGDQPEHAVEQIDRSEQLEIEHRLAMRD EGGGQRPDAGEGVQQVVIPLQREQAEQIAVGIVERRYVADGDDGEEQESIGNGKLLDQRHEVSPSNCRRTLADFAAGCSP NRKHRKNCAG >Mature_170_residues MVVYALRQPEADIDGEAADNEMRQVGEEAGGELDVVEGAETVDEDAGIEAAGAGDQPEHAVEQIDRSEQLEIEHRLAMRD EGGGQRPDAGEGVQQVVIPLQREQAEQIAVGIVERRYVADGDDGEEQESIGNGKLLDQRHEVSPSNCRRTLADFAAGCSP NRKHRKNCAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18357; Mature: 18357
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVYALRQPEADIDGEAADNEMRQVGEEAGGELDVVEGAETVDEDAGIEAAGAGDQPEHA CEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCCCCCCHHHH VEQIDRSEQLEIEHRLAMRDEGGGQRPDAGEGVQQVVIPLQREQAEQIAVGIVERRYVAD HHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC GDDGEEQESIGNGKLLDQRHEVSPSNCRRTLADFAAGCSPNRKHRKNCAG CCCCHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCHHHHCCCCC >Mature Secondary Structure MVVYALRQPEADIDGEAADNEMRQVGEEAGGELDVVEGAETVDEDAGIEAAGAGDQPEHA CEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCCCCCCHHHH VEQIDRSEQLEIEHRLAMRDEGGGQRPDAGEGVQQVVIPLQREQAEQIAVGIVERRYVAD HHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC GDDGEEQESIGNGKLLDQRHEVSPSNCRRTLADFAAGCSPNRKHRKNCAG CCCCHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA