| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472326
Identifier: 13472326
GI number: 13472326
Start: 2091959
End: 2092873
Strand: Reverse
Name: 13472326
Synonym: mll2586
Alternate gene names: NA
Gene position: 2092873-2091959 (Counterclockwise)
Preceding gene: 13472329
Following gene: 13472325
Centisome position: 29.74
GC content: 65.68
Gene sequence:
>915_bases GTGAAATCATCCAGCCTGGCCGGCGCCGTTTCCCCCATGATCCCGGTGCTCGTCTGTGCATTCGGCATCTTCCTTCTGTC CGGCATGGATGCGGCGATGAAGGTGCTGGTCATCGCTGTCGGTGTCTACAACACGGTGCTGTGGCGCAGCATGCTGGCGA CATTGATCGCCGGTGCGGGCTGGCTGGCGGGGCCGCGCTCGCTTCCTACCGCCGCGGTGCTGAGGCTGCATGCGCTGCGC GCGGTGGTTGTCGGCATCGTCCTGATGTCATTCTTCTGGGGGCTTGCAAGACTGCCGCTGGCGGAGGCGGTCGGGCTTAG TTTCGTGGCGCCGCTGTTCGCGCTCCTGCTGGCCGCGCTGCTTCTGGGCGAAAGGATCCAGCGCAAGGCGATCTGGGCGT CACTCGCCGGCATCGCGGGCGTCGCGATCATCGTGGCGGGCCAGTTCGGGCAGAAGACCTATGCCGGCGATGCGCTGCTC GGCACGGCGGCGGTGCTGGTCTCGACGGTGTTCTATGCCTACAATCTGATCCTCGCGCGGCGACAGGCGATGCTGGCCAA GCCAATCGAGATCATGCTGTTCCAGAACCTTTGCGTCGCGGTCATGCTTGGCCTTGCCGCACCCTGGCTTGCCATCTCGC TGCCCAGCAATCTCTGGCTTCCGCTCGCCGGGGTGACGGCCCTGTCGCTCGCCGGCCAGTTCCTGATGAGCTGGGCCTAT GCGCGGGCCGAAGCGCAATATCTGATCCCGACCGAATATTCGGCCTTCATCTGGGCGATCGCGCTCGGCTGGTTCTTCTT CGACGAGGCGGTGACCTGGACGACGCTGGCGGGAGCCGGCCTCATCGTGGCCAGCTGCCTGATCGCCGCACGCTCCAACC CCAGACTGGCCGAGCCGATCGAAGTCGCGGTTTGA
Upstream 100 bases:
>100_bases ACCGACTGCGTTGGACTGCCACATGGGCGGGGCTGCCATCTGGCCCCGTCCTGTTGCCCTGATATGCCAGCTTGCATCCG TCATCCTCGAGTGAGCCCGC
Downstream 100 bases:
>100_bases AGGGGGAAGCGCCCTCCGCGACGCGTCGACGCATAGTTCTCACAGCAGAAATTGCACGACCCATCAAAGCAGGGAGCGCT TGTGCGTAGCCAGCATCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MKSSSLAGAVSPMIPVLVCAFGIFLLSGMDAAMKVLVIAVGVYNTVLWRSMLATLIAGAGWLAGPRSLPTAAVLRLHALR AVVVGIVLMSFFWGLARLPLAEAVGLSFVAPLFALLLAALLLGERIQRKAIWASLAGIAGVAIIVAGQFGQKTYAGDALL GTAAVLVSTVFYAYNLILARRQAMLAKPIEIMLFQNLCVAVMLGLAAPWLAISLPSNLWLPLAGVTALSLAGQFLMSWAY ARAEAQYLIPTEYSAFIWAIALGWFFFDEAVTWTTLAGAGLIVASCLIAARSNPRLAEPIEVAV
Sequences:
>Translated_304_residues MKSSSLAGAVSPMIPVLVCAFGIFLLSGMDAAMKVLVIAVGVYNTVLWRSMLATLIAGAGWLAGPRSLPTAAVLRLHALR AVVVGIVLMSFFWGLARLPLAEAVGLSFVAPLFALLLAALLLGERIQRKAIWASLAGIAGVAIIVAGQFGQKTYAGDALL GTAAVLVSTVFYAYNLILARRQAMLAKPIEIMLFQNLCVAVMLGLAAPWLAISLPSNLWLPLAGVTALSLAGQFLMSWAY ARAEAQYLIPTEYSAFIWAIALGWFFFDEAVTWTTLAGAGLIVASCLIAARSNPRLAEPIEVAV >Mature_304_residues MKSSSLAGAVSPMIPVLVCAFGIFLLSGMDAAMKVLVIAVGVYNTVLWRSMLATLIAGAGWLAGPRSLPTAAVLRLHALR AVVVGIVLMSFFWGLARLPLAEAVGLSFVAPLFALLLAALLLGERIQRKAIWASLAGIAGVAIIVAGQFGQKTYAGDALL GTAAVLVSTVFYAYNLILARRQAMLAKPIEIMLFQNLCVAVMLGLAAPWLAISLPSNLWLPLAGVTALSLAGQFLMSWAY ARAEAQYLIPTEYSAFIWAIALGWFFFDEAVTWTTLAGAGLIVASCLIAARSNPRLAEPIEVAV
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32106; Mature: 32106
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSSSLAGAVSPMIPVLVCAFGIFLLSGMDAAMKVLVIAVGVYNTVLWRSMLATLIAGAG CCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WLAGPRSLPTAAVLRLHALRAVVVGIVLMSFFWGLARLPLAEAVGLSFVAPLFALLLAAL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LLGERIQRKAIWASLAGIAGVAIIVAGQFGQKTYAGDALLGTAAVLVSTVFYAYNLILAR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHH RQAMLAKPIEIMLFQNLCVAVMLGLAAPWLAISLPSNLWLPLAGVTALSLAGQFLMSWAY HHHHHHCHHHHHHHHHHHHHHHHHHHCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHH ARAEAQYLIPTEYSAFIWAIALGWFFFDEAVTWTTLAGAGLIVASCLIAARSNPRLAEPI HHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH EVAV HHCC >Mature Secondary Structure MKSSSLAGAVSPMIPVLVCAFGIFLLSGMDAAMKVLVIAVGVYNTVLWRSMLATLIAGAG CCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WLAGPRSLPTAAVLRLHALRAVVVGIVLMSFFWGLARLPLAEAVGLSFVAPLFALLLAAL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LLGERIQRKAIWASLAGIAGVAIIVAGQFGQKTYAGDALLGTAAVLVSTVFYAYNLILAR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHH RQAMLAKPIEIMLFQNLCVAVMLGLAAPWLAISLPSNLWLPLAGVTALSLAGQFLMSWAY HHHHHHCHHHHHHHHHHHHHHHHHHHCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHH ARAEAQYLIPTEYSAFIWAIALGWFFFDEAVTWTTLAGAGLIVASCLIAARSNPRLAEPI HHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH EVAV HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9252185 [H]