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The map label for this gene is exsH [H]

Identifier: 13472325

GI number: 13472325

Start: 2090109

End: 2091602

Strand: Reverse

Name: exsH [H]

Synonym: mll2585

Alternate gene names: 13472325

Gene position: 2091602-2090109 (Counterclockwise)

Preceding gene: 13472326

Following gene: 13472324

Centisome position: 29.73

GC content: 60.58

Gene sequence:

>1494_bases
ATGAGCTTCTTCGTCAACGCCTTAGGTGTTCCTCTCCCCTACAGCGGCGCTTCCAGCCATTGGTACTCGGCGGCAGGGTC
CGGGCCGGACTTGTACGGCAGTTCCGGGAACGACTCGTTCTACGGAGCATCCGGTGTCAACGTCACCATGCACGGAGGTA
CAGGCGATGACATCTATTACCTCTATGCGGCGGGCAACAAGGTGGCGGAGGCCGCTGGGGCAGGCATCGACACGATCAGC
ACGTGGATGAGCTACAAGCTCCCCGACAACGTCGAGAATCTCGTCGTCACAAACGCCAATAACTATGCTTTCGGAAATGG
GTTGGACAACATCATCACCGCCAAGGCCGGGCACCAGACTCTGGACGGAGGCGCGGGAAACGATGTGCTGATCGATGGCG
GCGGCGGTTACGACACTTTCATCGTCTCGAAAGGCAACGGAAGCGACCTGATAGCGAATTTTGCCGCCACCGACACCGTC
CGCCTCAATGGCTATGGGTTCACTTCGTTCGACGCCATCCACTCAAGCATGATCCAGGCGGGATCGAACGTGCTGCTGAA
CCTCGGGTCCGGCGAGATCCTCGAGTTCAAGGACACGACCATCGACAAGCTGCAGCCCAGCCAGTTCGAATTGCCGATCG
ATAAATCCGGGATGCAGCTCTCCTTCAGTGACGATTTCAACACGCTGAACCTTCACAACAGCCAGGGCGGCACGTGGGAT
TCCAACTTCTGGTGGGGAGCGCCGAACGGCAGCACCTTGAGCAGCAACAATGAGCTGCAATGGTACGTCGACGCCAACTA
CGCACCGACGAGCTCCGTCCATCCGTTCAGCGTGAACAACGGCGTGCTCACCATCACCGCGGCGCAGGCGCCGGCGGATA
TCAAGCCGCTGATCAACAATTACGAATACACCTCAGGCATTCTGACGACCCACGATTCCTTCTCGCAGACCTATGGCTAT
TTCGAAATACGGGCCGACCTGCCCGAGAACGCCGGCGCCTGGCCGGCCTTCTGGCTGCTTCCGGAAGACGGTTCGTGGCC
GCCGGAACTCGATGTCGTTGAAACTGTCGGCCAGGCCGCGAACTCATTGATCATGACGGCGCACTCCAATGAAACGGGGA
CGCACACCAAGGTCACGTCGATAGTGAGTGTCTCGAACCCCGACGGCTTCCACACCTATGGCCTGCTCTGGACGCCGGAC
AAGCTCGTCTGGACCTATGACGGCGTGCAGGTCGCGGAAACGGCGACGCCGTCCGACATGAACAAGCCCATGTATATGCT
GGTCGATCTCGCGGTCGGCGGCTTGGCCGGCGCCCCTCCGGATCATCTGGCCGCACCGGCCGAGATGAAGATCGACTACG
TCCGCGCCTATACGCTGGACAGTGCGCCGGCAAACGCCCTGAACATCGCCAGCAGCAGCATCGGCACGCACAGTGTCGCA
ACGCACGGCAACAGCACGCTGCACGGCGGCTCCGAGTTCGGGGGCCACGCGTAG

Upstream 100 bases:

>100_bases
GGAACGGTATCGTGCATGGCAATTTTGGTCCGGATGCGGTCGCCTGGAACTCGTATCGAGCGATCCGAGCAGGCCAGGCA
TCACGAGGAGGATTTATCCG

Downstream 100 bases:

>100_bases
GTCTCGGGAACATGCAGCGTCGGGGAATGTGGAAATGACTGGACCGTCTGGCCTGCGTCCGGTCTTCATGCGCGCCATCG
CCGATGTCGGCGTCTTCTCG

Product: endo-1,3-1,4-beta-glycanase

Products: NA

Alternate protein names: Succinoglycan biosynthesis protein exsH [H]

Number of amino acids: Translated: 497; Mature: 496

Protein sequence:

>497_residues
MSFFVNALGVPLPYSGASSHWYSAAGSGPDLYGSSGNDSFYGASGVNVTMHGGTGDDIYYLYAAGNKVAEAAGAGIDTIS
TWMSYKLPDNVENLVVTNANNYAFGNGLDNIITAKAGHQTLDGGAGNDVLIDGGGGYDTFIVSKGNGSDLIANFAATDTV
RLNGYGFTSFDAIHSSMIQAGSNVLLNLGSGEILEFKDTTIDKLQPSQFELPIDKSGMQLSFSDDFNTLNLHNSQGGTWD
SNFWWGAPNGSTLSSNNELQWYVDANYAPTSSVHPFSVNNGVLTITAAQAPADIKPLINNYEYTSGILTTHDSFSQTYGY
FEIRADLPENAGAWPAFWLLPEDGSWPPELDVVETVGQAANSLIMTAHSNETGTHTKVTSIVSVSNPDGFHTYGLLWTPD
KLVWTYDGVQVAETATPSDMNKPMYMLVDLAVGGLAGAPPDHLAAPAEMKIDYVRAYTLDSAPANALNIASSSIGTHSVA
THGNSTLHGGSEFGGHA

Sequences:

>Translated_497_residues
MSFFVNALGVPLPYSGASSHWYSAAGSGPDLYGSSGNDSFYGASGVNVTMHGGTGDDIYYLYAAGNKVAEAAGAGIDTIS
TWMSYKLPDNVENLVVTNANNYAFGNGLDNIITAKAGHQTLDGGAGNDVLIDGGGGYDTFIVSKGNGSDLIANFAATDTV
RLNGYGFTSFDAIHSSMIQAGSNVLLNLGSGEILEFKDTTIDKLQPSQFELPIDKSGMQLSFSDDFNTLNLHNSQGGTWD
SNFWWGAPNGSTLSSNNELQWYVDANYAPTSSVHPFSVNNGVLTITAAQAPADIKPLINNYEYTSGILTTHDSFSQTYGY
FEIRADLPENAGAWPAFWLLPEDGSWPPELDVVETVGQAANSLIMTAHSNETGTHTKVTSIVSVSNPDGFHTYGLLWTPD
KLVWTYDGVQVAETATPSDMNKPMYMLVDLAVGGLAGAPPDHLAAPAEMKIDYVRAYTLDSAPANALNIASSSIGTHSVA
THGNSTLHGGSEFGGHA
>Mature_496_residues
SFFVNALGVPLPYSGASSHWYSAAGSGPDLYGSSGNDSFYGASGVNVTMHGGTGDDIYYLYAAGNKVAEAAGAGIDTIST
WMSYKLPDNVENLVVTNANNYAFGNGLDNIITAKAGHQTLDGGAGNDVLIDGGGGYDTFIVSKGNGSDLIANFAATDTVR
LNGYGFTSFDAIHSSMIQAGSNVLLNLGSGEILEFKDTTIDKLQPSQFELPIDKSGMQLSFSDDFNTLNLHNSQGGTWDS
NFWWGAPNGSTLSSNNELQWYVDANYAPTSSVHPFSVNNGVLTITAAQAPADIKPLINNYEYTSGILTTHDSFSQTYGYF
EIRADLPENAGAWPAFWLLPEDGSWPPELDVVETVGQAANSLIMTAHSNETGTHTKVTSIVSVSNPDGFHTYGLLWTPDK
LVWTYDGVQVAETATPSDMNKPMYMLVDLAVGGLAGAPPDHLAAPAEMKIDYVRAYTLDSAPANALNIASSSIGTHSVAT
HGNSTLHGGSEFGGHA

Specific function: Cleaves high molecular weight succinoglycan to yield LMW succinoglycan. Dynamically regulate the molecular weight distribution of succinoglycan by cleaving nascent succinoglycan only during a limited period after its synthesis, perhaps before it undergoes

COG id: COG2273

COG function: function code G; Beta-glucanase/Beta-glucan synthetase

Gene ontology:

Cell location: Secreted. Note=Probably by a type-III secretion system [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 hemolysin-type calcium-binding repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008985
- InterPro:   IPR013320
- InterPro:   IPR000757
- InterPro:   IPR011049 [H]

Pfam domain/function: PF00722 Glyco_hydro_16 [H]

EC number: NA

Molecular weight: Translated: 52487; Mature: 52356

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFFVNALGVPLPYSGASSHWYSAAGSGPDLYGSSGNDSFYGASGVNVTMHGGTGDDIYY
CCEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCEEE
LYAAGNKVAEAAGAGIDTISTWMSYKLPDNVENLVVTNANNYAFGNGLDNIITAKAGHQT
EEECCCHHHHHHCCCHHHHHHHHEECCCCCCCEEEEECCCCEECCCCCCCEEEECCCCCC
LDGGAGNDVLIDGGGGYDTFIVSKGNGSDLIANFAATDTVRLNGYGFTSFDAIHSSMIQA
CCCCCCCEEEEECCCCEEEEEEECCCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHHHC
GSNVLLNLGSGEILEFKDTTIDKLQPSQFELPIDKSGMQLSFSDDFNTLNLHNSQGGTWD
CCEEEEECCCCCEEEECCCCHHHCCCCEEECCCCCCCCEEEECCCCCEEEEECCCCCCCC
SNFWWGAPNGSTLSSNNELQWYVDANYAPTSSVHPFSVNNGVLTITAAQAPADIKPLINN
CCEEEECCCCCEECCCCCEEEEEECCCCCCCCCCCEEECCCEEEEEECCCCCCCHHHHCC
YEYTSGILTTHDSFSQTYGYFEIRADLPENAGAWPAFWLLPEDGSWPPELDVVETVGQAA
CEECCCEEEECCCHHHCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHC
NSLIMTAHSNETGTHTKVTSIVSVSNPDGFHTYGLLWTPDKLVWTYDGVQVAETATPSDM
CEEEEEEECCCCCCEEEEEEEEEECCCCCCEEEEEEECCCEEEEEECCEEEECCCCCCCC
NKPMYMLVDLAVGGLAGAPPDHLAAPAEMKIDYVRAYTLDSAPANALNIASSSIGTHSVA
CCCEEEEEEEHHCCCCCCCHHHHCCCCCEEEEEEEEEEECCCCCCEEEECCCCCCCCEEE
THGNSTLHGGSEFGGHA
ECCCCEECCCCCCCCCC
>Mature Secondary Structure 
SFFVNALGVPLPYSGASSHWYSAAGSGPDLYGSSGNDSFYGASGVNVTMHGGTGDDIYY
CEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCEEE
LYAAGNKVAEAAGAGIDTISTWMSYKLPDNVENLVVTNANNYAFGNGLDNIITAKAGHQT
EEECCCHHHHHHCCCHHHHHHHHEECCCCCCCEEEEECCCCEECCCCCCCEEEECCCCCC
LDGGAGNDVLIDGGGGYDTFIVSKGNGSDLIANFAATDTVRLNGYGFTSFDAIHSSMIQA
CCCCCCCEEEEECCCCEEEEEEECCCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHHHC
GSNVLLNLGSGEILEFKDTTIDKLQPSQFELPIDKSGMQLSFSDDFNTLNLHNSQGGTWD
CCEEEEECCCCCEEEECCCCHHHCCCCEEECCCCCCCCEEEECCCCCEEEEECCCCCCCC
SNFWWGAPNGSTLSSNNELQWYVDANYAPTSSVHPFSVNNGVLTITAAQAPADIKPLINN
CCEEEECCCCCEECCCCCEEEEEECCCCCCCCCCCEEECCCEEEEEECCCCCCCHHHHCC
YEYTSGILTTHDSFSQTYGYFEIRADLPENAGAWPAFWLLPEDGSWPPELDVVETVGQAA
CEECCCEEEECCCHHHCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHC
NSLIMTAHSNETGTHTKVTSIVSVSNPDGFHTYGLLWTPDKLVWTYDGVQVAETATPSDM
CEEEEEEECCCCCCEEEEEEEEEECCCCCCEEEEEEECCCEEEEEECCEEEECCCCCCCC
NKPMYMLVDLAVGGLAGAPPDHLAAPAEMKIDYVRAYTLDSAPANALNIASSSIGTHSVA
CCCEEEEEEEHHCCCCCCCHHHHCCCCCEEEEEEEEEEECCCCCCEEEECCCCCCCCEEE
THGNSTLHGGSEFGGHA
ECCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11902715; 11481431; 9560202 [H]