Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13472326

Identifier: 13472326

GI number: 13472326

Start: 2091959

End: 2092873

Strand: Reverse

Name: 13472326

Synonym: mll2586

Alternate gene names: NA

Gene position: 2092873-2091959 (Counterclockwise)

Preceding gene: 13472329

Following gene: 13472325

Centisome position: 29.74

GC content: 65.68

Gene sequence:

>915_bases
GTGAAATCATCCAGCCTGGCCGGCGCCGTTTCCCCCATGATCCCGGTGCTCGTCTGTGCATTCGGCATCTTCCTTCTGTC
CGGCATGGATGCGGCGATGAAGGTGCTGGTCATCGCTGTCGGTGTCTACAACACGGTGCTGTGGCGCAGCATGCTGGCGA
CATTGATCGCCGGTGCGGGCTGGCTGGCGGGGCCGCGCTCGCTTCCTACCGCCGCGGTGCTGAGGCTGCATGCGCTGCGC
GCGGTGGTTGTCGGCATCGTCCTGATGTCATTCTTCTGGGGGCTTGCAAGACTGCCGCTGGCGGAGGCGGTCGGGCTTAG
TTTCGTGGCGCCGCTGTTCGCGCTCCTGCTGGCCGCGCTGCTTCTGGGCGAAAGGATCCAGCGCAAGGCGATCTGGGCGT
CACTCGCCGGCATCGCGGGCGTCGCGATCATCGTGGCGGGCCAGTTCGGGCAGAAGACCTATGCCGGCGATGCGCTGCTC
GGCACGGCGGCGGTGCTGGTCTCGACGGTGTTCTATGCCTACAATCTGATCCTCGCGCGGCGACAGGCGATGCTGGCCAA
GCCAATCGAGATCATGCTGTTCCAGAACCTTTGCGTCGCGGTCATGCTTGGCCTTGCCGCACCCTGGCTTGCCATCTCGC
TGCCCAGCAATCTCTGGCTTCCGCTCGCCGGGGTGACGGCCCTGTCGCTCGCCGGCCAGTTCCTGATGAGCTGGGCCTAT
GCGCGGGCCGAAGCGCAATATCTGATCCCGACCGAATATTCGGCCTTCATCTGGGCGATCGCGCTCGGCTGGTTCTTCTT
CGACGAGGCGGTGACCTGGACGACGCTGGCGGGAGCCGGCCTCATCGTGGCCAGCTGCCTGATCGCCGCACGCTCCAACC
CCAGACTGGCCGAGCCGATCGAAGTCGCGGTTTGA

Upstream 100 bases:

>100_bases
ACCGACTGCGTTGGACTGCCACATGGGCGGGGCTGCCATCTGGCCCCGTCCTGTTGCCCTGATATGCCAGCTTGCATCCG
TCATCCTCGAGTGAGCCCGC

Downstream 100 bases:

>100_bases
AGGGGGAAGCGCCCTCCGCGACGCGTCGACGCATAGTTCTCACAGCAGAAATTGCACGACCCATCAAAGCAGGGAGCGCT
TGTGCGTAGCCAGCATCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MKSSSLAGAVSPMIPVLVCAFGIFLLSGMDAAMKVLVIAVGVYNTVLWRSMLATLIAGAGWLAGPRSLPTAAVLRLHALR
AVVVGIVLMSFFWGLARLPLAEAVGLSFVAPLFALLLAALLLGERIQRKAIWASLAGIAGVAIIVAGQFGQKTYAGDALL
GTAAVLVSTVFYAYNLILARRQAMLAKPIEIMLFQNLCVAVMLGLAAPWLAISLPSNLWLPLAGVTALSLAGQFLMSWAY
ARAEAQYLIPTEYSAFIWAIALGWFFFDEAVTWTTLAGAGLIVASCLIAARSNPRLAEPIEVAV

Sequences:

>Translated_304_residues
MKSSSLAGAVSPMIPVLVCAFGIFLLSGMDAAMKVLVIAVGVYNTVLWRSMLATLIAGAGWLAGPRSLPTAAVLRLHALR
AVVVGIVLMSFFWGLARLPLAEAVGLSFVAPLFALLLAALLLGERIQRKAIWASLAGIAGVAIIVAGQFGQKTYAGDALL
GTAAVLVSTVFYAYNLILARRQAMLAKPIEIMLFQNLCVAVMLGLAAPWLAISLPSNLWLPLAGVTALSLAGQFLMSWAY
ARAEAQYLIPTEYSAFIWAIALGWFFFDEAVTWTTLAGAGLIVASCLIAARSNPRLAEPIEVAV
>Mature_304_residues
MKSSSLAGAVSPMIPVLVCAFGIFLLSGMDAAMKVLVIAVGVYNTVLWRSMLATLIAGAGWLAGPRSLPTAAVLRLHALR
AVVVGIVLMSFFWGLARLPLAEAVGLSFVAPLFALLLAALLLGERIQRKAIWASLAGIAGVAIIVAGQFGQKTYAGDALL
GTAAVLVSTVFYAYNLILARRQAMLAKPIEIMLFQNLCVAVMLGLAAPWLAISLPSNLWLPLAGVTALSLAGQFLMSWAY
ARAEAQYLIPTEYSAFIWAIALGWFFFDEAVTWTTLAGAGLIVASCLIAARSNPRLAEPIEVAV

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32106; Mature: 32106

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSSLAGAVSPMIPVLVCAFGIFLLSGMDAAMKVLVIAVGVYNTVLWRSMLATLIAGAG
CCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
WLAGPRSLPTAAVLRLHALRAVVVGIVLMSFFWGLARLPLAEAVGLSFVAPLFALLLAAL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LLGERIQRKAIWASLAGIAGVAIIVAGQFGQKTYAGDALLGTAAVLVSTVFYAYNLILAR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHH
RQAMLAKPIEIMLFQNLCVAVMLGLAAPWLAISLPSNLWLPLAGVTALSLAGQFLMSWAY
HHHHHHCHHHHHHHHHHHHHHHHHHHCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
ARAEAQYLIPTEYSAFIWAIALGWFFFDEAVTWTTLAGAGLIVASCLIAARSNPRLAEPI
HHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
EVAV
HHCC
>Mature Secondary Structure
MKSSSLAGAVSPMIPVLVCAFGIFLLSGMDAAMKVLVIAVGVYNTVLWRSMLATLIAGAG
CCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
WLAGPRSLPTAAVLRLHALRAVVVGIVLMSFFWGLARLPLAEAVGLSFVAPLFALLLAAL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LLGERIQRKAIWASLAGIAGVAIIVAGQFGQKTYAGDALLGTAAVLVSTVFYAYNLILAR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHH
RQAMLAKPIEIMLFQNLCVAVMLGLAAPWLAISLPSNLWLPLAGVTALSLAGQFLMSWAY
HHHHHHCHHHHHHHHHHHHHHHHHHHCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
ARAEAQYLIPTEYSAFIWAIALGWFFFDEAVTWTTLAGAGLIVASCLIAARSNPRLAEPI
HHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
EVAV
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]