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The map label for this gene is ybfB [H]

Identifier: 13472211

GI number: 13472211

Start: 1974948

End: 1976150

Strand: Direct

Name: ybfB [H]

Synonym: mlr2429

Alternate gene names: 13472211

Gene position: 1974948-1976150 (Clockwise)

Preceding gene: 13472210

Following gene: 13472214

Centisome position: 28.07

GC content: 66.83

Gene sequence:

>1203_bases
ATGAACCTTTCCTATCGTTGGGTCATCGTCGCCACTGGTGCGCTGATGTCCTGTGTCGCCATCGGCACGATGTTTTCGCT
GGCGATTTTCCTTGAACCGATGGCGCTCGACACGCAGTGGTCGCGCGCCGGTATTTCGAGCGCCATGACGCTCAACTTCC
TGGTGATGGGCCTCGGCGGCTTTGCCTGGGGCGCGCTGTCCGACCGCTTCGGCGCCCGCATCGTCGTGGCGATCGGTGCC
GTGCTGCTCGGCCTGGCACTCGTGGTGGCGAGCCGCGCCGGCTCGCTGCTGACTTTCCAGATCAGCTATGGCGTGCTCGT
CGGGCTCGCCGCCAGCGCCTTCTTCGCGCCGATGATCGCGCTGACCACCGCCTGGTTCGACACCAACCGCAGCCTTGCGG
TTTCGCTGGTCTCGGCCGGCATGGGCGTCGCCCCGATGACGATCTCGCCCTTCGCCCGCTGGCTGATCTCGGCCTATGAA
TGGCGCACCGCCATGTTCGATATCGGCATCATGGCCTGGGTGCTGCTGCTGCCGGCGGTGCTTCTGGTGCGCCAGCCGCC
AAAGCCCGCCGTGGCGGCCGGGGCTTCCGCACCGGTTGCCGAAGGCGCCGGCATGAGCGTGGCCCAGGCGCTGCGTTCGC
CGCAGTTCATCGTGCTGGGGCTGACCTTTTTCACCTGCTGCGCTGCCCATTCCGGGCCGATCTTCCATATGGTCAGCTAC
GCCATGCTGTGCGGTGTCGCCCCCATGGCGGCGGTGACGATCTACAGCGTCGAGGGTCTCGCAGGCTTGGGCGGCAGGCT
TCTCTACGGCGTGCTGGCCGACCGGCTCGGCGTCAAGCCGGTGCTGATCACGGGCCTGGTGATCCAGGCGGTCGTCATTG
CCGCCTATCTCTCGGTCAGCCAGCTCGACCAGTTCTATGTGCTGGCCGTCATCTTCGGCGCCACCTATGGCGGCGTCATG
CCGCTCTACGCGGTGCTCGCGCGCGAATATTTCGGCCAGCGCATCCTCGGTACCGTTTTCGGCGCCGCCACCATGCTGTC
CAGCCTCGGCATGGCGCTCGGCCCGCTCGCCGGCGGCATGGTGTTCGACGCCTATGCCAGCTACCACTGGCTGTTCATCG
GCTCGGCCCTCATCGGCCTGGGCGCCGCAGGCATAGCGATCGCCTTCCCGCCCCTGCCACGCAGGGAATTGCAGATGGCC
TAA

Upstream 100 bases:

>100_bases
CTGGATAAAAAATGCAACCGGATTGTAGGATCGGTTTCGGTGCCATCGTCCTTCGGACGCAAGCAGCGCGCAGCGCTGCC
CTCTGGCATGGGAGATTTGC

Downstream 100 bases:

>100_bases
AGCGGATGGACGGGCGCGGGTGACAATTCATCGGCGCCCACCTTTGTCGAAGCTCAATGCCCGAACCAGCGGGCTTTGCG
GCTGGAGCCGAAATTCACCT

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MNLSYRWVIVATGALMSCVAIGTMFSLAIFLEPMALDTQWSRAGISSAMTLNFLVMGLGGFAWGALSDRFGARIVVAIGA
VLLGLALVVASRAGSLLTFQISYGVLVGLAASAFFAPMIALTTAWFDTNRSLAVSLVSAGMGVAPMTISPFARWLISAYE
WRTAMFDIGIMAWVLLLPAVLLVRQPPKPAVAAGASAPVAEGAGMSVAQALRSPQFIVLGLTFFTCCAAHSGPIFHMVSY
AMLCGVAPMAAVTIYSVEGLAGLGGRLLYGVLADRLGVKPVLITGLVIQAVVIAAYLSVSQLDQFYVLAVIFGATYGGVM
PLYAVLAREYFGQRILGTVFGAATMLSSLGMALGPLAGGMVFDAYASYHWLFIGSALIGLGAAGIAIAFPPLPRRELQMA

Sequences:

>Translated_400_residues
MNLSYRWVIVATGALMSCVAIGTMFSLAIFLEPMALDTQWSRAGISSAMTLNFLVMGLGGFAWGALSDRFGARIVVAIGA
VLLGLALVVASRAGSLLTFQISYGVLVGLAASAFFAPMIALTTAWFDTNRSLAVSLVSAGMGVAPMTISPFARWLISAYE
WRTAMFDIGIMAWVLLLPAVLLVRQPPKPAVAAGASAPVAEGAGMSVAQALRSPQFIVLGLTFFTCCAAHSGPIFHMVSY
AMLCGVAPMAAVTIYSVEGLAGLGGRLLYGVLADRLGVKPVLITGLVIQAVVIAAYLSVSQLDQFYVLAVIFGATYGGVM
PLYAVLAREYFGQRILGTVFGAATMLSSLGMALGPLAGGMVFDAYASYHWLFIGSALIGLGAAGIAIAFPPLPRRELQMA
>Mature_400_residues
MNLSYRWVIVATGALMSCVAIGTMFSLAIFLEPMALDTQWSRAGISSAMTLNFLVMGLGGFAWGALSDRFGARIVVAIGA
VLLGLALVVASRAGSLLTFQISYGVLVGLAASAFFAPMIALTTAWFDTNRSLAVSLVSAGMGVAPMTISPFARWLISAYE
WRTAMFDIGIMAWVLLLPAVLLVRQPPKPAVAAGASAPVAEGAGMSVAQALRSPQFIVLGLTFFTCCAAHSGPIFHMVSY
AMLCGVAPMAAVTIYSVEGLAGLGGRLLYGVLADRLGVKPVLITGLVIQAVVIAAYLSVSQLDQFYVLAVIFGATYGGVM
PLYAVLAREYFGQRILGTVFGAATMLSSLGMALGPLAGGMVFDAYASYHWLFIGSALIGLGAAGIAIAFPPLPRRELQMA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Homo sapiens, GI42475555, Length=386, Percent_Identity=27.2020725388601, Blast_Score=108, Evalue=7e-24,
Organism=Escherichia coli, GI1789969, Length=379, Percent_Identity=25.065963060686, Blast_Score=88, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41733; Mature: 41733

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50850 MFS ; PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSYRWVIVATGALMSCVAIGTMFSLAIFLEPMALDTQWSRAGISSAMTLNFLVMGLGG
CCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHH
FAWGALSDRFGARIVVAIGAVLLGLALVVASRAGSLLTFQISYGVLVGLAASAFFAPMIA
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHH
LTTAWFDTNRSLAVSLVSAGMGVAPMTISPFARWLISAYEWRTAMFDIGIMAWVLLLPAV
HHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLVRQPPKPAVAAGASAPVAEGAGMSVAQALRSPQFIVLGLTFFTCCAAHSGPIFHMVSY
HHHCCCCCCCHHCCCCCCCCCCCCHHHHHHHCCCCEEEEHHHHHHHHHCCCCCHHHHHHH
AMLCGVAPMAAVTIYSVEGLAGLGGRLLYGVLADRLGVKPVLITGLVIQAVVIAAYLSVS
HHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
QLDQFYVLAVIFGATYGGVMPLYAVLAREYFGQRILGTVFGAATMLSSLGMALGPLAGGM
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
VFDAYASYHWLFIGSALIGLGAAGIAIAFPPLPRRELQMA
HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHCCCC
>Mature Secondary Structure
MNLSYRWVIVATGALMSCVAIGTMFSLAIFLEPMALDTQWSRAGISSAMTLNFLVMGLGG
CCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHH
FAWGALSDRFGARIVVAIGAVLLGLALVVASRAGSLLTFQISYGVLVGLAASAFFAPMIA
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHH
LTTAWFDTNRSLAVSLVSAGMGVAPMTISPFARWLISAYEWRTAMFDIGIMAWVLLLPAV
HHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLVRQPPKPAVAAGASAPVAEGAGMSVAQALRSPQFIVLGLTFFTCCAAHSGPIFHMVSY
HHHCCCCCCCHHCCCCCCCCCCCCHHHHHHHCCCCEEEEHHHHHHHHHCCCCCHHHHHHH
AMLCGVAPMAAVTIYSVEGLAGLGGRLLYGVLADRLGVKPVLITGLVIQAVVIAAYLSVS
HHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
QLDQFYVLAVIFGATYGGVMPLYAVLAREYFGQRILGTVFGAATMLSSLGMALGPLAGGM
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
VFDAYASYHWLFIGSALIGLGAAGIAIAFPPLPRRELQMA
HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]