| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472214
Identifier: 13472214
GI number: 13472214
Start: 1978186
End: 1979892
Strand: Direct
Name: 13472214
Synonym: mlr2433
Alternate gene names: NA
Gene position: 1978186-1979892 (Clockwise)
Preceding gene: 13472211
Following gene: 13472216
Centisome position: 28.11
GC content: 68.6
Gene sequence:
>1707_bases TTGCGTGTCCGAATTCAATTGCTTGGCGGCTTCAGCGTCAGTCTGGACGATCAGATCGTACCGGTCGCGGCGTGGCGCCG GGATCGTGGCGCCGCACTGGTGAAGCTGCTGGCCGTCGCCCGCTCCCACCGCATCCACCGCGAACAGGTGATGGAGGCCT TCTGGCCCGATCTCGATCCGGAGGCCGCCGGCGCCAATTTGCGCAAGGCCGTCCACTTTGCCCGCCGCGCGCTGGGCGCC CATGACCTCATCGAACAAGCGGCCGAAATTATCGCCCTCGCCCCGGCCGCCGACCTCGAGATCGACGTCGAAACCTTCGA GGCCGCCGCCAGGCTTGCCTTGCACTCCAAGGAAATCGCCGCCTGCGAAGCGGCCGCCGATCTCTACACGGGAGACCTGC TGCCGGACGACCCCTATGTCGACTGGTTCGAAACGCCCCGCCAGGCCCTGCGCCAGCGCTATGCCGAGGTGCTGCGGGCC GGCAAGCTATGGCAGCGCCTGATCGCGCTGGACCCGGCCGACGAGCAGGCACAATGCGCCCTGATGCAATCGGCGCTCGA CGCCGGCAACCGCGCCGAGGCGATCCGGCTGTTCAATCAGCTGAGCGAATGCCTGCGGATCGACCTCGGCGTCGGCCCCG GCGCGGAAACCGTGAAGCTCTACGAAAAGGCGCTGGCCGTGCCCTCTATCGACCCCGTCGGCTTGAGCGACCGCATCCGC GCCTCGCTGGCCTGGGGCCTGCTGCACCTGCAAAGCGGCGACTTCGCCAAGGCCGGCCAGGTTGGCCGGGAAACCCGCGA ACTGGCCATGGGCGCGGGGTTGGCCCGCGAGGTTGGCGAGGCCAGCGCCCTGATCGGCCTGGTGGCCCACATGCAGGGCC AGTGGCGCGAACTGTTCAGGGCGGAGTTCATCGAATGGGTCCGCTCCAAGCCGGCCTTCGTCTCCAACGTTTTTGACGGG CATCTGTGCCTGGCCGAATTCTGCCTCTGCAGTGCCAAGGGCCACCACGACATCGCTGCCTCCGCACGAGAGCTCCTGTC GGTGGCCGAGGGCGCCGGCTCGGTCGCCGGGCGCGGCCTGGCCTCGCTCGTGCTGGGTGAAGCAGCCCTGTTCTCGGGCC AGTTGGCCGAGGCCGAACGCATGTTGACCGAGGCCGAAAGACTCTACGCGCAGGTGGGAACCGTGGCCGGCCGCGTACTG GCGCTGCAGCGTCTGACGGAACTCGCGCTTGCCCGCCACCAGAAATGGCAGGCGGGACGATTGATCCACCGCGCCACCAC CCTTGCCCGTTCTTCCTGGCTGGCGCCGCACCTGCTGATCAGCCTGAAAGGGCTTGAGGTGCGCGCCGCCGCCACCTCCG AGAGGATCGCCGAGACCATTCGCGAAGGTGACCGCATGCTGTCATCGGGCTGCAATTGCCAGCCTTGCTCGATGACCTTC CGTACGGCGGCTGCCGTTGCCCTGGCCGAGGCGGGCGAGATCGAACAGGTCAACCGCCGGCTCGACGAGGCTGAACGGGT CGCCGGCATGTGGAACGGCGGCCCCTGGGTGGCGGCCGTGTGGGAAGCGCGCGGCGTGCAGCGCCGGGCCGAGCATAACG AAACCCGGGCCATCGCGGCGTTCGAGGAAGCAGCCACGCGCTTTGCCGCGCTTGGCAGGCCGATCGACGAGGTGCGGTGT CGGGCGCGGATGGCAGATCTGGACTAG
Upstream 100 bases:
>100_bases AGACTAGGCAACCTATGTTCCGCCAGCGTTCCCCGCCCCACAGGCGCTTGTGACGGCGATTTCGGGCATGCGGGTCTCGC ATGCTGAAAGGGCCTTTCGA
Downstream 100 bases:
>100_bases CACTGCCCGCCAGCACAGGCCTGGCTTAAAAAGCAAATAATCTCAGTTTCTTACCTTGGATTGTTCATTCGCGAAAATGG CTTTGCAGCGCGGTGCGAAA
Product: regulatory protein
Products: NA
Alternate protein names: Transcriptional Activator Domain-Containing Protein; Transcriptional Regulator SARP Family; SARP Family Transcriptional Regulator; Bacterial Transcriptional Activator Domain Family; Transcriptional Regulator; Regulatory Protein; Response Regulator Receiver And SARP Domain Protein
Number of amino acids: Translated: 568; Mature: 568
Protein sequence:
>568_residues MRVRIQLLGGFSVSLDDQIVPVAAWRRDRGAALVKLLAVARSHRIHREQVMEAFWPDLDPEAAGANLRKAVHFARRALGA HDLIEQAAEIIALAPAADLEIDVETFEAAARLALHSKEIAACEAAADLYTGDLLPDDPYVDWFETPRQALRQRYAEVLRA GKLWQRLIALDPADEQAQCALMQSALDAGNRAEAIRLFNQLSECLRIDLGVGPGAETVKLYEKALAVPSIDPVGLSDRIR ASLAWGLLHLQSGDFAKAGQVGRETRELAMGAGLAREVGEASALIGLVAHMQGQWRELFRAEFIEWVRSKPAFVSNVFDG HLCLAEFCLCSAKGHHDIAASARELLSVAEGAGSVAGRGLASLVLGEAALFSGQLAEAERMLTEAERLYAQVGTVAGRVL ALQRLTELALARHQKWQAGRLIHRATTLARSSWLAPHLLISLKGLEVRAAATSERIAETIREGDRMLSSGCNCQPCSMTF RTAAAVALAEAGEIEQVNRRLDEAERVAGMWNGGPWVAAVWEARGVQRRAEHNETRAIAAFEEAATRFAALGRPIDEVRC RARMADLD
Sequences:
>Translated_568_residues MRVRIQLLGGFSVSLDDQIVPVAAWRRDRGAALVKLLAVARSHRIHREQVMEAFWPDLDPEAAGANLRKAVHFARRALGA HDLIEQAAEIIALAPAADLEIDVETFEAAARLALHSKEIAACEAAADLYTGDLLPDDPYVDWFETPRQALRQRYAEVLRA GKLWQRLIALDPADEQAQCALMQSALDAGNRAEAIRLFNQLSECLRIDLGVGPGAETVKLYEKALAVPSIDPVGLSDRIR ASLAWGLLHLQSGDFAKAGQVGRETRELAMGAGLAREVGEASALIGLVAHMQGQWRELFRAEFIEWVRSKPAFVSNVFDG HLCLAEFCLCSAKGHHDIAASARELLSVAEGAGSVAGRGLASLVLGEAALFSGQLAEAERMLTEAERLYAQVGTVAGRVL ALQRLTELALARHQKWQAGRLIHRATTLARSSWLAPHLLISLKGLEVRAAATSERIAETIREGDRMLSSGCNCQPCSMTF RTAAAVALAEAGEIEQVNRRLDEAERVAGMWNGGPWVAAVWEARGVQRRAEHNETRAIAAFEEAATRFAALGRPIDEVRC RARMADLD >Mature_568_residues MRVRIQLLGGFSVSLDDQIVPVAAWRRDRGAALVKLLAVARSHRIHREQVMEAFWPDLDPEAAGANLRKAVHFARRALGA HDLIEQAAEIIALAPAADLEIDVETFEAAARLALHSKEIAACEAAADLYTGDLLPDDPYVDWFETPRQALRQRYAEVLRA GKLWQRLIALDPADEQAQCALMQSALDAGNRAEAIRLFNQLSECLRIDLGVGPGAETVKLYEKALAVPSIDPVGLSDRIR ASLAWGLLHLQSGDFAKAGQVGRETRELAMGAGLAREVGEASALIGLVAHMQGQWRELFRAEFIEWVRSKPAFVSNVFDG HLCLAEFCLCSAKGHHDIAASARELLSVAEGAGSVAGRGLASLVLGEAALFSGQLAEAERMLTEAERLYAQVGTVAGRVL ALQRLTELALARHQKWQAGRLIHRATTLARSSWLAPHLLISLKGLEVRAAATSERIAETIREGDRMLSSGCNCQPCSMTF RTAAAVALAEAGEIEQVNRRLDEAERVAGMWNGGPWVAAVWEARGVQRRAEHNETRAIAAFEEAATRFAALGRPIDEVRC RARMADLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61828; Mature: 61828
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVRIQLLGGFSVSLDDQIVPVAAWRRDRGAALVKLLAVARSHRIHREQVMEAFWPDLDP CEEEEEEECCEEECCCCCEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EAAGANLRKAVHFARRALGAHDLIEQAAEIIALAPAADLEIDVETFEAAARLALHSKEIA CCCCHHHHHHHHHHHHHHCHHHHHHHHHHHEEECCCCCCEEEHHHHHHHHHHHHHHHHHH ACEAAADLYTGDLLPDDPYVDWFETPRQALRQRYAEVLRAGKLWQRLIALDPADEQAQCA HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LMQSALDAGNRAEAIRLFNQLSECLRIDLGVGPGAETVKLYEKALAVPSIDPVGLSDRIR HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHH ASLAWGLLHLQSGDFAKAGQVGRETRELAMGAGLAREVGEASALIGLVAHMQGQWRELFR HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEFIEWVRSKPAFVSNVFDGHLCLAEFCLCSAKGHHDIAASARELLSVAEGAGSVAGRGL HHHHHHHHCCCHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH ASLVLGEAALFSGQLAEAERMLTEAERLYAQVGTVAGRVLALQRLTELALARHQKWQAGR HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH LIHRATTLARSSWLAPHLLISLKGLEVRAAATSERIAETIREGDRMLSSGCNCQPCSMTF HHHHHHHHHHHHCCCHHHHEEECCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH RTAAAVALAEAGEIEQVNRRLDEAERVAGMWNGGPWVAAVWEARGVQRRAEHNETRAIAA HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHCCHHHHHHH FEEAATRFAALGRPIDEVRCRARMADLD HHHHHHHHHHHCCCHHHHHHHHHHCCCC >Mature Secondary Structure MRVRIQLLGGFSVSLDDQIVPVAAWRRDRGAALVKLLAVARSHRIHREQVMEAFWPDLDP CEEEEEEECCEEECCCCCEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EAAGANLRKAVHFARRALGAHDLIEQAAEIIALAPAADLEIDVETFEAAARLALHSKEIA CCCCHHHHHHHHHHHHHHCHHHHHHHHHHHEEECCCCCCEEEHHHHHHHHHHHHHHHHHH ACEAAADLYTGDLLPDDPYVDWFETPRQALRQRYAEVLRAGKLWQRLIALDPADEQAQCA HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LMQSALDAGNRAEAIRLFNQLSECLRIDLGVGPGAETVKLYEKALAVPSIDPVGLSDRIR HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHH ASLAWGLLHLQSGDFAKAGQVGRETRELAMGAGLAREVGEASALIGLVAHMQGQWRELFR HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEFIEWVRSKPAFVSNVFDGHLCLAEFCLCSAKGHHDIAASARELLSVAEGAGSVAGRGL HHHHHHHHCCCHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH ASLVLGEAALFSGQLAEAERMLTEAERLYAQVGTVAGRVLALQRLTELALARHQKWQAGR HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH LIHRATTLARSSWLAPHLLISLKGLEVRAAATSERIAETIREGDRMLSSGCNCQPCSMTF HHHHHHHHHHHHCCCHHHHEEECCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH RTAAAVALAEAGEIEQVNRRLDEAERVAGMWNGGPWVAAVWEARGVQRRAEHNETRAIAA HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHCCHHHHHHH FEEAATRFAALGRPIDEVRCRARMADLD HHHHHHHHHHHCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA