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The map label for this gene is ycgN [C]

Identifier: 13472196

GI number: 13472196

Start: 1962422

End: 1962868

Strand: Reverse

Name: ycgN [C]

Synonym: mll2411

Alternate gene names: 13472196

Gene position: 1962868-1962422 (Counterclockwise)

Preceding gene: 13472198

Following gene: 13472195

Centisome position: 27.9

GC content: 64.21

Gene sequence:

>447_bases
ATGGAGACGCCGTTCTGGAAAACGAAGACGCTGGAGCAGATGAGCCCGGCCGAGTGGGAATCGCTGTGCGATGGCTGCGG
CAAATGCTGCCTGTCGAAGCTCGAGGACGAGGATACCGGCGAGATTTACTGGACCAGTGTCGGCTGTCGGCTGTTCGACG
CGCAGACCTGCCGCTGTTCAGACTACGCCAACCGGCTGGCGCGCGTTCCCGATTGCGTCGGGCTGACGCCGCAGAATGTG
CGCACCATCAGCTGGCTGCCAAGCACCTGCGCCTATCGCCTGGTGGCCGAGGGCCGCGACCTCTACTGGTGGCACCGGCT
GGTGTCGGGCAGTGCCGAGACCGTGCACGAGGCCGGCATCTCGATGCGCGGCCGGGTCAAGGCGAGCGAGACCGATCTGG
CCGAGCCGGAAGATTATTTTGACTATATGCTCGACGACGAGCCTTGA

Upstream 100 bases:

>100_bases
GGCCTTTTGAAGGCAACTTCGTGTCATTCGGCCGGCTTGGGGCCGCATTTCAACCGTTGTCGCGCTTGACCTTGGCGGCG
GCTGGGGCCACATCCCCAAA

Downstream 100 bases:

>100_bases
GGTCCGCCTCCGCACGGCTCCGAACAAGGAACGAGCAAGAATTTTTTGGGCGCGCATTGTTCGAAACCTGGCCAAGATTT
CGTTTTTCCGCCACATGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
METPFWKTKTLEQMSPAEWESLCDGCGKCCLSKLEDEDTGEIYWTSVGCRLFDAQTCRCSDYANRLARVPDCVGLTPQNV
RTISWLPSTCAYRLVAEGRDLYWWHRLVSGSAETVHEAGISMRGRVKASETDLAEPEDYFDYMLDDEP

Sequences:

>Translated_148_residues
METPFWKTKTLEQMSPAEWESLCDGCGKCCLSKLEDEDTGEIYWTSVGCRLFDAQTCRCSDYANRLARVPDCVGLTPQNV
RTISWLPSTCAYRLVAEGRDLYWWHRLVSGSAETVHEAGISMRGRVKASETDLAEPEDYFDYMLDDEP
>Mature_148_residues
METPFWKTKTLEQMSPAEWESLCDGCGKCCLSKLEDEDTGEIYWTSVGCRLFDAQTCRCSDYANRLARVPDCVGLTPQNV
RTISWLPSTCAYRLVAEGRDLYWWHRLVSGSAETVHEAGISMRGRVKASETDLAEPEDYFDYMLDDEP

Specific function: Unknown

COG id: COG2983

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0260 family

Homologues:

Organism=Escherichia coli, GI145693117, Length=139, Percent_Identity=51.7985611510791, Blast_Score=158, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2411_RHILO (Q98IG7)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_103763.1
- GeneID:   1226424
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:mll2411
- NMPDR:   fig|266835.1.peg.1867
- HOGENOM:   HBG490440
- OMA:   TCQCSDY
- ProtClustDB:   PRK05170
- HAMAP:   MF_00676
- InterPro:   IPR008228
- InterPro:   IPR005358
- PIRSF:   PIRSF006173

Pfam domain/function: PF03692 UPF0153

EC number: NA

Molecular weight: Translated: 16865; Mature: 16865

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
6.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METPFWKTKTLEQMSPAEWESLCDGCGKCCLSKLEDEDTGEIYWTSVGCRLFDAQTCRCS
CCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECEEEECCCCCCHH
DYANRLARVPDCVGLTPQNVRTISWLPSTCAYRLVAEGRDLYWWHRLVSGSAETVHEAGI
HHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHCCC
SMRGRVKASETDLAEPEDYFDYMLDDEP
CCCCCCCCCCCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure
METPFWKTKTLEQMSPAEWESLCDGCGKCCLSKLEDEDTGEIYWTSVGCRLFDAQTCRCS
CCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECEEEECCCCCCHH
DYANRLARVPDCVGLTPQNVRTISWLPSTCAYRLVAEGRDLYWWHRLVSGSAETVHEAGI
HHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHCCC
SMRGRVKASETDLAEPEDYFDYMLDDEP
CCCCCCCCCCCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968