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The map label for this gene is dgoD [H]

Identifier: 13472132

GI number: 13472132

Start: 1879666

End: 1880829

Strand: Direct

Name: dgoD [H]

Synonym: mlr2330

Alternate gene names: 13472132

Gene position: 1879666-1880829 (Clockwise)

Preceding gene: 13472131

Following gene: 13472133

Centisome position: 26.71

GC content: 64.95

Gene sequence:

>1164_bases
ATGACGACGAAGCTCAAGATCACCGCGATCAAGCCCTACCCGGTGTGGGTGGGAACGCGCAACCAGATGCTGGTGAAGGT
CGAGACCGACCAGGGCATCTTCGGCTGGGGCGAGAGCGGCCTGAGCGGCCGCGAGAGAGCCGTGACCGGCGCGGTCGAGC
ACTATCGCGAATTCCTCGTCGGCCGCGATCCCCTGCAGATCGGCCGGATCTGGCAAGAGGCCTATCGCAGCCAGTATTTT
GAAGGCGGGCGCGTTTTGCAGGCGGCGATTTCCGCCATCGACATCGCGCTTCACGACATTAAGGGCAAGGCGCTGGGCGT
GCCGGTCTACGAACTGCTCGGCGGCAGACAGCGCGACCGCATCCCCACTTTCGCCTCGACCGGTGACGAGGCCGAGGGCG
ATGTCGCCATCGAACGGGCCCGCGAATTGTACCAACAAGGCTGGCAGGCGATCCGCTTCTTTCCCGCCGGGCAAAGCAGC
AAGGATATCTTCGAGCCGCGCGAGTCGATCGGCGTGACCGCGCGGATGCTGAACAAGGCCCGCGAGGCGCTGGGCGACGA
CGTCGTCCTCGGCATCGACTATCATCATCGGCTGTCGGTGGCCGAGGCGGCGAGCTTCTGCAACAAGCTCGGCCGCGGCG
TGCTCGATTTCCTCGAGGAGCCGATACGCGACGAAACCCCGGAAGCCTACGAATCCCTGCGCACGATGACCGACATCCCG
TTCGCCATCGGCGAGGAATTTGCCAGCAAGTGGCAGTTCCTGCCCTATATCGAGCGCGGCATCCACCAATTCAACCGGCT
CGATGTCTGCAATGTCGGCGGGCTCACCGAAGCGATGAAGGTCGCCGGCTGGAGCGAGGCGCACTATGTCGACCTGATGC
CGCACAATCCGCTTGGCCCGGTATGCACGGCCGCGACCGTGCATCTTGCCGCCGCGGTCCCCAATTTCGCCTGGCTCGAG
ACCAGGGCGCCCGAAAGAAAGCTGGGCTTCGACAGTTCCGAGTTCTTCCCGGTGCAACCACAACTCGACGGCCCCGCCTA
TCCGGTCGGCGACCTGCCGGGGCTCGGCGTCGAGGTCAACGAGGCGGCGATCCAGGCGCAGAGTTTCCGCTTCTGGGAAG
CGCCCCACCTCAAGCGCCGCGACGGTTCTGTCACCAACTGGTAG

Upstream 100 bases:

>100_bases
TCTGGCTCGAGTTCGACCAGGAGCGGATGCACCTGTTCGACGGCGAAACCGAAATGGCTCTCGAGGCCGCCTGAGACAGG
CGTTTGGGACGTGGGCGTGG

Downstream 100 bases:

>100_bases
TTCAATTTCAACCGGAGTCCACCATGACGCATACCTCCGACATAATCCGGCCGCCCAAGGACCTGATCGAGGGATTGAGG
GAGATCGGCGCAGCGACCGT

Product: hypothetical protein

Products: NA

Alternate protein names: GalD [H]

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MTTKLKITAIKPYPVWVGTRNQMLVKVETDQGIFGWGESGLSGRERAVTGAVEHYREFLVGRDPLQIGRIWQEAYRSQYF
EGGRVLQAAISAIDIALHDIKGKALGVPVYELLGGRQRDRIPTFASTGDEAEGDVAIERARELYQQGWQAIRFFPAGQSS
KDIFEPRESIGVTARMLNKAREALGDDVVLGIDYHHRLSVAEAASFCNKLGRGVLDFLEEPIRDETPEAYESLRTMTDIP
FAIGEEFASKWQFLPYIERGIHQFNRLDVCNVGGLTEAMKVAGWSEAHYVDLMPHNPLGPVCTAATVHLAAAVPNFAWLE
TRAPERKLGFDSSEFFPVQPQLDGPAYPVGDLPGLGVEVNEAAIQAQSFRFWEAPHLKRRDGSVTNW

Sequences:

>Translated_387_residues
MTTKLKITAIKPYPVWVGTRNQMLVKVETDQGIFGWGESGLSGRERAVTGAVEHYREFLVGRDPLQIGRIWQEAYRSQYF
EGGRVLQAAISAIDIALHDIKGKALGVPVYELLGGRQRDRIPTFASTGDEAEGDVAIERARELYQQGWQAIRFFPAGQSS
KDIFEPRESIGVTARMLNKAREALGDDVVLGIDYHHRLSVAEAASFCNKLGRGVLDFLEEPIRDETPEAYESLRTMTDIP
FAIGEEFASKWQFLPYIERGIHQFNRLDVCNVGGLTEAMKVAGWSEAHYVDLMPHNPLGPVCTAATVHLAAAVPNFAWLE
TRAPERKLGFDSSEFFPVQPQLDGPAYPVGDLPGLGVEVNEAAIQAQSFRFWEAPHLKRRDGSVTNW
>Mature_386_residues
TTKLKITAIKPYPVWVGTRNQMLVKVETDQGIFGWGESGLSGRERAVTGAVEHYREFLVGRDPLQIGRIWQEAYRSQYFE
GGRVLQAAISAIDIALHDIKGKALGVPVYELLGGRQRDRIPTFASTGDEAEGDVAIERARELYQQGWQAIRFFPAGQSSK
DIFEPRESIGVTARMLNKAREALGDDVVLGIDYHHRLSVAEAASFCNKLGRGVLDFLEEPIRDETPEAYESLRTMTDIPF
AIGEEFASKWQFLPYIERGIHQFNRLDVCNVGGLTEAMKVAGWSEAHYVDLMPHNPLGPVCTAATVHLAAAVPNFAWLET
RAPERKLGFDSSEFFPVQPQLDGPAYPVGDLPGLGVEVNEAAIQAQSFRFWEAPHLKRRDGSVTNW

Specific function: Catalyzes the dehydration of D-galactonate to 2-keto-3- deoxy-D-galactonate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family. GalD subfamily [H]

Homologues:

Organism=Escherichia coli, GI48994953, Length=391, Percent_Identity=33.5038363171356, Blast_Score=210, Evalue=2e-55,
Organism=Escherichia coli, GI1787864, Length=399, Percent_Identity=31.077694235589, Blast_Score=171, Evalue=7e-44,
Organism=Escherichia coli, GI226510960, Length=360, Percent_Identity=26.1111111111111, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018110
- InterPro:   IPR013342
- InterPro:   IPR013341
- InterPro:   IPR001354 [H]

Pfam domain/function: PF01188 MR_MLE; PF02746 MR_MLE_N [H]

EC number: =4.2.1.6 [H]

Molecular weight: Translated: 43116; Mature: 42985

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS00908 MR_MLE_1 ; PS00909 MR_MLE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKLKITAIKPYPVWVGTRNQMLVKVETDQGIFGWGESGLSGRERAVTGAVEHYREFLV
CCCEEEEEEECCCEEEEECCCCEEEEEECCCCEECCCCCCCCCCHHHHHHHHHHHHHHHC
GRDPLQIGRIWQEAYRSQYFEGGRVLQAAISAIDIALHDIKGKALGVPVYELLGGRQRDR
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCC
IPTFASTGDEAEGDVAIERARELYQQGWQAIRFFPAGQSSKDIFEPRESIGVTARMLNKA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHCCHHHHHHHHHHHHHH
REALGDDVVLGIDYHHRLSVAEAASFCNKLGRGVLDFLEEPIRDETPEAYESLRTMTDIP
HHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
FAIGEEFASKWQFLPYIERGIHQFNRLDVCNVGGLTEAMKVAGWSEAHYVDLMPHNPLGP
HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCH
VCTAATVHLAAAVPNFAWLETRAPERKLGFDSSEFFPVQPQLDGPAYPVGDLPGLGVEVN
HHHHHHHHHHHHCCCCCEEECCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEH
EAAIQAQSFRFWEAPHLKRRDGSVTNW
HHHHHHHHCEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTKLKITAIKPYPVWVGTRNQMLVKVETDQGIFGWGESGLSGRERAVTGAVEHYREFLV
CCEEEEEEECCCEEEEECCCCEEEEEECCCCEECCCCCCCCCCHHHHHHHHHHHHHHHC
GRDPLQIGRIWQEAYRSQYFEGGRVLQAAISAIDIALHDIKGKALGVPVYELLGGRQRDR
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCC
IPTFASTGDEAEGDVAIERARELYQQGWQAIRFFPAGQSSKDIFEPRESIGVTARMLNKA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHCCHHHHHHHHHHHHHH
REALGDDVVLGIDYHHRLSVAEAASFCNKLGRGVLDFLEEPIRDETPEAYESLRTMTDIP
HHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
FAIGEEFASKWQFLPYIERGIHQFNRLDVCNVGGLTEAMKVAGWSEAHYVDLMPHNPLGP
HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCH
VCTAATVHLAAAVPNFAWLETRAPERKLGFDSSEFFPVQPQLDGPAYPVGDLPGLGVEVN
HHHHHHHHHHHHCCCCCEEECCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEH
EAAIQAQSFRFWEAPHLKRRDGSVTNW
HHHHHHHHCEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA