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The map label for this gene is 13472003

Identifier: 13472003

GI number: 13472003

Start: 1754046

End: 1754903

Strand: Direct

Name: 13472003

Synonym: msr8615

Alternate gene names: NA

Gene position: 1754046-1754903 (Clockwise)

Preceding gene: 13472002

Following gene: 13472004

Centisome position: 24.93

GC content: 64.57

Gene sequence:

>858_bases
GTGCGGAAGGCCGGCCATGACCTCTTATCTCGTATCCCTTCTTGGTGGAGCCCTTATCGGTCTTTCATCGGTCATCCTGC
TGATCCTGAACGGCAGGATCGCCGGCGTAAGCGGGATTGTCGGCAGGGCGGTCCAGGGCATCGGTGTCTGGACAAACGGT
GCCTTCGTCGCCGGATTGCTGCTTGGCCCGGTGGTGTACTTCGCGGCCTTTCATCATTGGCCTACCGTGACGGTGACGGC
GTCGCTCCCATTGGTGATGCTTGCGGGATTGCTGGTCGGCTTCGGATCCCGAATGGGTTCGGGTTGCACCAGCGGTCATG
GCGTCATGGGGCTGGCCCGGCTATCGCCACGTTCGATCGCCGCGGTCCTGACATTCCTTGCGAGCGGCATCGTGGCTGTC
GCGTTTCTTCGCGGAGCAGTCCTGTGAGACACACCAAACTACAGCCTGTTGCCGCCCTGGCCGCGGGCACCCTTTTCGGG
CTTGGTCTGGCGCTGTCGGGCATGCTCGATCCTGTGCGCGTCCAGGGCTTTCTCGACGTCTTTGGCGCGTGGGATCCGAG
CCTGGCCTTTGTGCTGGGCGGTGCCGTCGCGGTTGCGATGGGAGGCATGGCCTGGCTCCGGCGGATGTCGCGACCGCTGC
TGGCGGATCGCTTCCATTTGCCAATGAAGTCGCGGATCGACGCCCGTCTGATCGTCGGCTCGGCGATCTTCGGCCTGGGA
TGGGGCCTGGGCGGGTTTTGCCCCGGCCCGGCGCTGGCTTCGCTGTCGCTTGGGCTGATGCCAACCCTGGTCTTCGTGGC
CTTTATGCTGGCGGGCATGGTTGCCCATGACCGCTTCTTCGTCGGGCGGCCATCGTGA

Upstream 100 bases:

>100_bases
GCCAACATTGTGGAAACGCGGCGAGACGGAAAACAGATCTTCTACCGGCTGACCGCCGAGAAGGCCGCTCAACTGGTTGC
AGCGCTTTACACGATCTTTT

Downstream 100 bases:

>100_bases
GCGCTACTTTGTTTGCCGCCCTGGGCTCTGGTGGCCTGGTCGGATTCACCCTTGGACTTGTCGGCGGCGGCGGATCGATC
CTTGCCACGCCGCTCCTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MRKAGHDLLSRIPSWWSPYRSFIGHPADPERQDRRRKRDCRQGGPGHRCLDKRCLRRRIAAWPGGVLRGLSSLAYRDGDG
VAPIGDACGIAGRLRIPNGFGLHQRSWRHGAGPAIATFDRRGPDIPCERHRGCRVSSRSSPVRHTKLQPVAALAAGTLFG
LGLALSGMLDPVRVQGFLDVFGAWDPSLAFVLGGAVAVAMGGMAWLRRMSRPLLADRFHLPMKSRIDARLIVGSAIFGLG
WGLGGFCPGPALASLSLGLMPTLVFVAFMLAGMVAHDRFFVGRPS

Sequences:

>Translated_285_residues
MRKAGHDLLSRIPSWWSPYRSFIGHPADPERQDRRRKRDCRQGGPGHRCLDKRCLRRRIAAWPGGVLRGLSSLAYRDGDG
VAPIGDACGIAGRLRIPNGFGLHQRSWRHGAGPAIATFDRRGPDIPCERHRGCRVSSRSSPVRHTKLQPVAALAAGTLFG
LGLALSGMLDPVRVQGFLDVFGAWDPSLAFVLGGAVAVAMGGMAWLRRMSRPLLADRFHLPMKSRIDARLIVGSAIFGLG
WGLGGFCPGPALASLSLGLMPTLVFVAFMLAGMVAHDRFFVGRPS
>Mature_285_residues
MRKAGHDLLSRIPSWWSPYRSFIGHPADPERQDRRRKRDCRQGGPGHRCLDKRCLRRRIAAWPGGVLRGLSSLAYRDGDG
VAPIGDACGIAGRLRIPNGFGLHQRSWRHGAGPAIATFDRRGPDIPCERHRGCRVSSRSSPVRHTKLQPVAALAAGTLFG
LGLALSGMLDPVRVQGFLDVFGAWDPSLAFVLGGAVAVAMGGMAWLRRMSRPLLADRFHLPMKSRIDARLIVGSAIFGLG
WGLGGFCPGPALASLSLGLMPTLVFVAFMLAGMVAHDRFFVGRPS

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 30872; Mature: 30872

Theoretical pI: Translated: 11.98; Mature: 11.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCC
>Mature Secondary Structure
MRKAGHDLLSRIPSWWSPYRSFIGHPADPERQDRRRKRDCRQGGPGHRCLDKRCLRRRIA
CCCCHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AWPGGVLRGLSSLAYRDGDGVAPIGDACGIAGRLRIPNGFGLHQRSWRHGAGPAIATFDR
CCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEECCCCCCCCCCCCCCCCCCCEEECCC
RGPDIPCERHRGCRVSSRSSPVRHTKLQPVAALAAGTLFGLGLALSGMLDPVRVQGFLDV
CCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
FGAWDPSLAFVLGGAVAVAMGGMAWLRRMSRPLLADRFHLPMKSRIDARLIVGSAIFGLG
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHCCCHHHHHHHHHHHHH
WGLGGFCPGPALASLSLGLMPTLVFVAFMLAGMVAHDRFFVGRPS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12533478 [H]