Click here to switch to the map view.

The map label for this gene is 13472004

Identifier: 13472004

GI number: 13472004

Start: 1754062

End: 1754472

Strand: Direct

Name: 13472004

Synonym: mlr2160

Alternate gene names: NA

Gene position: 1754062-1754472 (Clockwise)

Preceding gene: 13472003

Following gene: 13472005

Centisome position: 24.93

GC content: 61.56

Gene sequence:

>411_bases
ATGACCTCTTATCTCGTATCCCTTCTTGGTGGAGCCCTTATCGGTCTTTCATCGGTCATCCTGCTGATCCTGAACGGCAG
GATCGCCGGCGTAAGCGGGATTGTCGGCAGGGCGGTCCAGGGCATCGGTGTCTGGACAAACGGTGCCTTCGTCGCCGGAT
TGCTGCTTGGCCCGGTGGTGTACTTCGCGGCCTTTCATCATTGGCCTACCGTGACGGTGACGGCGTCGCTCCCATTGGTG
ATGCTTGCGGGATTGCTGGTCGGCTTCGGATCCCGAATGGGTTCGGGTTGCACCAGCGGTCATGGCGTCATGGGGCTGGC
CCGGCTATCGCCACGTTCGATCGCCGCGGTCCTGACATTCCTTGCGAGCGGCATCGTGGCTGTCGCGTTTCTTCGCGGAG
CAGTCCTGTGA

Upstream 100 bases:

>100_bases
CGCGGCGAGACGGAAAACAGATCTTCTACCGGCTGACCGCCGAGAAGGCCGCTCAACTGGTTGCAGCGCTTTACACGATC
TTTTGTGCGGAAGGCCGGCC

Downstream 100 bases:

>100_bases
GACACACCAAACTACAGCCTGTTGCCGCCCTGGCCGCGGGCACCCTTTTCGGGCTTGGTCTGGCGCTGTCGGGCATGCTC
GATCCTGTGCGCGTCCAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MTSYLVSLLGGALIGLSSVILLILNGRIAGVSGIVGRAVQGIGVWTNGAFVAGLLLGPVVYFAAFHHWPTVTVTASLPLV
MLAGLLVGFGSRMGSGCTSGHGVMGLARLSPRSIAAVLTFLASGIVAVAFLRGAVL

Sequences:

>Translated_136_residues
MTSYLVSLLGGALIGLSSVILLILNGRIAGVSGIVGRAVQGIGVWTNGAFVAGLLLGPVVYFAAFHHWPTVTVTASLPLV
MLAGLLVGFGSRMGSGCTSGHGVMGLARLSPRSIAAVLTFLASGIVAVAFLRGAVL
>Mature_135_residues
TSYLVSLLGGALIGLSSVILLILNGRIAGVSGIVGRAVQGIGVWTNGAFVAGLLLGPVVYFAAFHHWPTVTVTASLPLVM
LAGLLVGFGSRMGSGCTSGHGVMGLARLSPRSIAAVLTFLASGIVAVAFLRGAVL

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 13646; Mature: 13514

Theoretical pI: Translated: 12.20; Mature: 12.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSYLVSLLGGALIGLSSVILLILNGRIAGVSGIVGRAVQGIGVWTNGAFVAGLLLGPVV
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
YFAAFHHWPTVTVTASLPLVMLAGLLVGFGSRMGSGCTSGHGVMGLARLSPRSIAAVLTF
HHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHH
LASGIVAVAFLRGAVL
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TSYLVSLLGGALIGLSSVILLILNGRIAGVSGIVGRAVQGIGVWTNGAFVAGLLLGPVV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
YFAAFHHWPTVTVTASLPLVMLAGLLVGFGSRMGSGCTSGHGVMGLARLSPRSIAAVLTF
HHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHH
LASGIVAVAFLRGAVL
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12533478 [H]