Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13471965

Identifier: 13471965

GI number: 13471965

Start: 1722789

End: 1723139

Strand: Direct

Name: 13471965

Synonym: mlr2105

Alternate gene names: NA

Gene position: 1722789-1723139 (Clockwise)

Preceding gene: 13471962

Following gene: 13471969

Centisome position: 24.49

GC content: 62.68

Gene sequence:

>351_bases
GTGGACAGACCCCTATATGCCCTCGCCGAGTTTTTCTCCAAGCCGCCCGGCTTCTACGTGATGCTGGCGGCTGCCCTTGT
CTGTGCGCTGCTCACCAGCGCGACGCTCGGAACCTACATCATCTCGATTTCCGCCTTGTGCCTGACGGGCGTGGTTCTCA
TCCAGAACTACCGCGACACCGCGGCCATGCAGGCGAAGCTCAACGAAATAATCGTCGCCCTGGACACCGCCCGCAACGAG
GTGGTGGGGCTGGAACACGCCTCGCCCAAAGCCATCGATGCCGAGCTGAAAAACGTAGAAAACCGCGCCTCGACCGCCCC
GGCACACGAGACGACCCAGCCAGACGCCTAG

Upstream 100 bases:

>100_bases
CTAGTCCGATCGGTCACTCCAAGCAGGTTGCCGATTGGGCAAGAGCCCGCCGGCCTTATCGGCATGGCGGGTTCTCTGCA
TCTCTCGCGCGGAGATTTGG

Downstream 100 bases:

>100_bases
CCTTTACTTGCCTTGGCGGTTTTGGCCGCCTCGCAGGCGCGGCGAAACGCCTCCACCTCCCTTTCGGTGAGGTGCTCTAT
GCCGATAAAGTCATTCTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MDRPLYALAEFFSKPPGFYVMLAAALVCALLTSATLGTYIISISALCLTGVVLIQNYRDTAAMQAKLNEIIVALDTARNE
VVGLEHASPKAIDAELKNVENRASTAPAHETTQPDA

Sequences:

>Translated_116_residues
MDRPLYALAEFFSKPPGFYVMLAAALVCALLTSATLGTYIISISALCLTGVVLIQNYRDTAAMQAKLNEIIVALDTARNE
VVGLEHASPKAIDAELKNVENRASTAPAHETTQPDA
>Mature_116_residues
MDRPLYALAEFFSKPPGFYVMLAAALVCALLTSATLGTYIISISALCLTGVVLIQNYRDTAAMQAKLNEIIVALDTARNE
VVGLEHASPKAIDAELKNVENRASTAPAHETTQPDA

Specific function: Unknown

COG id: COG5478

COG function: function code S; Predicted small integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12392; Mature: 12392

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRPLYALAEFFSKPPGFYVMLAAALVCALLTSATLGTYIISISALCLTGVVLIQNYRDT
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
AAMQAKLNEIIVALDTARNEVVGLEHASPKAIDAELKNVENRASTAPAHETTQPDA
HHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MDRPLYALAEFFSKPPGFYVMLAAALVCALLTSATLGTYIISISALCLTGVVLIQNYRDT
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
AAMQAKLNEIIVALDTARNEVVGLEHASPKAIDAELKNVENRASTAPAHETTQPDA
HHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA