| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471969
Identifier: 13471969
GI number: 13471969
Start: 1725165
End: 1725896
Strand: Direct
Name: 13471969
Synonym: mlr2110
Alternate gene names: NA
Gene position: 1725165-1725896 (Clockwise)
Preceding gene: 13471965
Following gene: 13471970
Centisome position: 24.52
GC content: 62.98
Gene sequence:
>732_bases ATGTCTGATCCCACATGGGACGGAAGTCCTCAATACCGAAATGAACTGCTGCGATTCATGCCTGCGGATGATCTCGCATT GCTGGCGCCGCATATGCAGCGCTGCGCGTTGCCTGTGCGCATGATGCTGGTGACACCCAATATCCCGATAGAGGCCGTCT ATTTCATCGAACAGGGCATTGGTTCGGTGGTCGCCAGCACGGCGAGCGGCCATGATGCGGAGATTGGGTTCATCGGCTTC GAAGGCATGACCGGTTCCGCCCTGGTGATGGGAGATGACCGTGCCGCGCATGCCTGTTTTGTGCAGCTCGAAGGTGAAGC CATCCGCATCGATGCCGCCCCGTTCAACGCGGCCCTTGCGGCGAGCCCGACCTTGCGCCTGTTCCTGCTGCACTTCGTCA ACACGCTGCACACCCAGACCGGCTGCACCGCGCTGGTCAACGCCAGGCTGAAACTCGAAGAGCGGCTGGCACGCTGGCTG CTGATGTGCGACGATCGGGTGCCGGGCGAGAGCCTCGCCATGACGCACGAATTCCTTTCCATCATGCTTGGCGTGCGGCG GCCGGGCGTCACGGTCGCCCTGCAATTGCTGGAAGGCCGCGCGCTGATCCGCTCGCGCCGTGGCGAGATCGTCATTCGCG ACCGCGCCGGGCTGCTGGAACTCGCCAATGGCGGTTACGGCCAGGCCGAGGCCGAATATGCCAGGCTCATCGGTGAAATC ATGCCAGGCTGA
Upstream 100 bases:
>100_bases TTTCGGTCCAGGCCCCTATATACGGGTTATCGTTCGCACGTAATCACGGGCGCGGACGGCTGGGAGTTCGGGTGGCTCTT GCCCTGCATTGGGCGGTGCT
Downstream 100 bases:
>100_bases TCGGCGAGATCATGCCAGGCTGATCGGTGAGATCATGCCAGGCTGATCGGTGAGATCATGCCGGGCGGATCCGCGAGATC GTCTCTCGCTGAGCGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Crp/FNR Family Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator-Related Protein; Regulatory Protein Crp; Transcriptional Regulator Protein; Transcriptional Regulator; Regulatory Subunit Of CAMP-Dependent Protein Kinases; Transcription Regulator Crp Family; Transcriptional Regulatory Protein; GntR Family Transcriptional Regulator; Two-Component Response Regulator Protein; Transcriptional Regulator CAP/Crp Family; Transcriptional Regulator Crp/Fnr Family Protein
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MSDPTWDGSPQYRNELLRFMPADDLALLAPHMQRCALPVRMMLVTPNIPIEAVYFIEQGIGSVVASTASGHDAEIGFIGF EGMTGSALVMGDDRAAHACFVQLEGEAIRIDAAPFNAALAASPTLRLFLLHFVNTLHTQTGCTALVNARLKLEERLARWL LMCDDRVPGESLAMTHEFLSIMLGVRRPGVTVALQLLEGRALIRSRRGEIVIRDRAGLLELANGGYGQAEAEYARLIGEI MPG
Sequences:
>Translated_243_residues MSDPTWDGSPQYRNELLRFMPADDLALLAPHMQRCALPVRMMLVTPNIPIEAVYFIEQGIGSVVASTASGHDAEIGFIGF EGMTGSALVMGDDRAAHACFVQLEGEAIRIDAAPFNAALAASPTLRLFLLHFVNTLHTQTGCTALVNARLKLEERLARWL LMCDDRVPGESLAMTHEFLSIMLGVRRPGVTVALQLLEGRALIRSRRGEIVIRDRAGLLELANGGYGQAEAEYARLIGEI MPG >Mature_242_residues SDPTWDGSPQYRNELLRFMPADDLALLAPHMQRCALPVRMMLVTPNIPIEAVYFIEQGIGSVVASTASGHDAEIGFIGFE GMTGSALVMGDDRAAHACFVQLEGEAIRIDAAPFNAALAASPTLRLFLLHFVNTLHTQTGCTALVNARLKLEERLARWLL MCDDRVPGESLAMTHEFLSIMLGVRRPGVTVALQLLEGRALIRSRRGEIVIRDRAGLLELANGGYGQAEAEYARLIGEIM PG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26470; Mature: 26339
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPTWDGSPQYRNELLRFMPADDLALLAPHMQRCALPVRMMLVTPNIPIEAVYFIEQGI CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEHHHHHHH GSVVASTASGHDAEIGFIGFEGMTGSALVMGDDRAAHACFVQLEGEAIRIDAAPFNAALA HHHHHHCCCCCCCEEEEEEECCCCCCEEEEECCCCCEEEEEEECCCEEEEECCCCCCHHH ASPTLRLFLLHFVNTLHTQTGCTALVNARLKLEERLARWLLMCDDRVPGESLAMTHEFLS CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IMLGVRRPGVTVALQLLEGRALIRSRRGEIVIRDRAGLLELANGGYGQAEAEYARLIGEI HHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHHHH MPG CCC >Mature Secondary Structure SDPTWDGSPQYRNELLRFMPADDLALLAPHMQRCALPVRMMLVTPNIPIEAVYFIEQGI CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEHHHHHHH GSVVASTASGHDAEIGFIGFEGMTGSALVMGDDRAAHACFVQLEGEAIRIDAAPFNAALA HHHHHHCCCCCCCEEEEEEECCCCCCEEEEECCCCCEEEEEEECCCEEEEECCCCCCHHH ASPTLRLFLLHFVNTLHTQTGCTALVNARLKLEERLARWLLMCDDRVPGESLAMTHEFLS CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IMLGVRRPGVTVALQLLEGRALIRSRRGEIVIRDRAGLLELANGGYGQAEAEYARLIGEI HHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHHHH MPG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA