| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13471951
Identifier: 13471951
GI number: 13471951
Start: 1706296
End: 1707465
Strand: Direct
Name: 13471951
Synonym: mlr2085
Alternate gene names: NA
Gene position: 1706296-1707465 (Clockwise)
Preceding gene: 13471946
Following gene: 13471952
Centisome position: 24.25
GC content: 67.61
Gene sequence:
>1170_bases ATGAAACCGGAACAGCCTTCCATCCTGATCCTGGGAACGCGCGGCATCCCCGCGGCCCATGGCGGCTTCGAAACCTTCGC CGAGAGACTGGCGCTTTTCCTGGTCGCACGCGGCTGGAAGGTCGGCGTCTACTGCCAGGAAGAGGTCGAGCGGGTCGACC AGCGGGTGCGCCTCGACAGCTGGCGCGGCATCGACCTCATCCACGTCCAGGTCGCCTCGGAGGGCCCGCGCGCGACGCTG GAATTCGACTGGCAATGCGTGCTCGACGCCGCGCGCCGGCCCGGCGTCTGCCTGGTGCTTGGCTACAATGGCGCGGTGTT CCTCACCTGGCTCAGGCTGATGCGGCGCAAGGTCATCACCAATATGGACGGCATCGAGTGGCGCCGCCCCAAATGGGGGC GCGCGGCGCGCACCTGGTTCTGGCTCAATGAGTGGATCGGCGCCTGGGCCTCGCACAGGCTGGTCGCCGACCATCCCGTC ATTGCCGATCACCTGGCGACGCGCCGGCCGCGCAGCGCCATTTCCACCATCGCCTATGGCGCAGATCCGGTGACATCGGC ACCCGAGGCGCCGGTGCGCGCGCTCGGCCTCGAGCCCGGCAAATACCTGATCTCGATCGCGCGCATCGAGCCCGACAACA GCATCCTGCCGATCGTCGAAGCCTTCTGCAGCAAGAAGCGCGACATGAAGCTGGTGGTGCTGGGCACGCTGTCCGACCAG ATTCCCTATCATGTCGCGGTCCGCAAGGCGGCGAACGCCTCGGTGGTCCTGCCCGGCGCCATCTACGACCAGGCGGCGGT CAAGGCGCTGCGCTATCACGCCCGCGCCTATATGCATGGCCACACGGTCGGCGGCACCAACCCGTCGCTGGTCGAGGCGC TGGCCGCCGGCAACATGGTGATCGCGCACGACAATCCTTACAACAGATGGGTCGCCGGGGCCGCCGCCATCTATTTCACC GACACGCAGAGCTGCGCCGAGCGGATGCAACAGGCGATGGAGGATGACGTGCTGGTCAAGGCTTGCGGCGAGGCCGCCAG GACGCGCGCCCGCGAAGCCTTCCGCTGGGAGGATGTGCTGCAGGCCTACGAGAATGAAGCCTACCGGCTGCTCGGCGTGA CATCAGACCGAACGGCCGCTATCGACCGCCCCTCGCCCGGCGCGGTATGA
Upstream 100 bases:
>100_bases ATGCGACAATGGCTGGAATCGGGCCTGGCAGGCTTATTGCAAGGCCGAGACGGGACAGCCTTCCACAGCGGATTGGACGG ATTTGAAAGCGCCAGCAGCC
Downstream 100 bases:
>100_bases CGGGCTGGTCGCGCCGGCGGCTTCTCACCACCGCGCTGTCGACAGCGCTGGTGCCCGCCGCCGCATCGCTGGCGCCACTT TCCACCTCCTCCGCCCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase; Glycosyltransferase RfaG; Group 1 Glycosyl Transferase; Rhamnosyl Transferase WchF; Glycosyl Transferase Group 1 Family Protein; Polysaccharide Biosynthesis Protein/ Rhamnosyl Transferase; Rhamnosyl Transferase; Glycosyl Transferase Family Protein; Glycosyl-(Rhamnosyl) Transferase; Capsular Polysaccharide Bisynthesis Glycosyl Transferase; Glycosyltransferase Protein; Alpha-(1 2)-Rhamnosyltransferase; A-Glycosyltransferase; Rhamnosyltransferase RgpA; Polysaccharide Export Protein; Glycosyltransferase-Like Protein; Glycosyltransferase Family 4 Protein
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MKPEQPSILILGTRGIPAAHGGFETFAERLALFLVARGWKVGVYCQEEVERVDQRVRLDSWRGIDLIHVQVASEGPRATL EFDWQCVLDAARRPGVCLVLGYNGAVFLTWLRLMRRKVITNMDGIEWRRPKWGRAARTWFWLNEWIGAWASHRLVADHPV IADHLATRRPRSAISTIAYGADPVTSAPEAPVRALGLEPGKYLISIARIEPDNSILPIVEAFCSKKRDMKLVVLGTLSDQ IPYHVAVRKAANASVVLPGAIYDQAAVKALRYHARAYMHGHTVGGTNPSLVEALAAGNMVIAHDNPYNRWVAGAAAIYFT DTQSCAERMQQAMEDDVLVKACGEAARTRAREAFRWEDVLQAYENEAYRLLGVTSDRTAAIDRPSPGAV
Sequences:
>Translated_389_residues MKPEQPSILILGTRGIPAAHGGFETFAERLALFLVARGWKVGVYCQEEVERVDQRVRLDSWRGIDLIHVQVASEGPRATL EFDWQCVLDAARRPGVCLVLGYNGAVFLTWLRLMRRKVITNMDGIEWRRPKWGRAARTWFWLNEWIGAWASHRLVADHPV IADHLATRRPRSAISTIAYGADPVTSAPEAPVRALGLEPGKYLISIARIEPDNSILPIVEAFCSKKRDMKLVVLGTLSDQ IPYHVAVRKAANASVVLPGAIYDQAAVKALRYHARAYMHGHTVGGTNPSLVEALAAGNMVIAHDNPYNRWVAGAAAIYFT DTQSCAERMQQAMEDDVLVKACGEAARTRAREAFRWEDVLQAYENEAYRLLGVTSDRTAAIDRPSPGAV >Mature_389_residues MKPEQPSILILGTRGIPAAHGGFETFAERLALFLVARGWKVGVYCQEEVERVDQRVRLDSWRGIDLIHVQVASEGPRATL EFDWQCVLDAARRPGVCLVLGYNGAVFLTWLRLMRRKVITNMDGIEWRRPKWGRAARTWFWLNEWIGAWASHRLVADHPV IADHLATRRPRSAISTIAYGADPVTSAPEAPVRALGLEPGKYLISIARIEPDNSILPIVEAFCSKKRDMKLVVLGTLSDQ IPYHVAVRKAANASVVLPGAIYDQAAVKALRYHARAYMHGHTVGGTNPSLVEALAAGNMVIAHDNPYNRWVAGAAAIYFT DTQSCAERMQQAMEDDVLVKACGEAARTRAREAFRWEDVLQAYENEAYRLLGVTSDRTAAIDRPSPGAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43173; Mature: 43173
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPEQPSILILGTRGIPAAHGGFETFAERLALFLVARGWKVGVYCQEEVERVDQRVRLDS CCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCC WRGIDLIHVQVASEGPRATLEFDWQCVLDAARRPGVCLVLGYNGAVFLTWLRLMRRKVIT CCCEEEEEEEEECCCCCEEEEECHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHC NMDGIEWRRPKWGRAARTWFWLNEWIGAWASHRLVADHPVIADHLATRRPRSAISTIAYG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHCCCCHHHHHHHHCC ADPVTSAPEAPVRALGLEPGKYLISIARIEPDNSILPIVEAFCSKKRDMKLVVLGTLSDQ CCCCCCCCCCCHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCEEEEEEECCCCC IPYHVAVRKAANASVVLPGAIYDQAAVKALRYHARAYMHGHTVGGTNPSLVEALAAGNMV CCEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHCCCEE IAHDNPYNRWVAGAAAIYFTDTQSCAERMQQAMEDDVLVKACGEAARTRAREAFRWEDVL EEECCCCHHHHHCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAYENEAYRLLGVTSDRTAAIDRPSPGAV HHHCCCCEEEEEECCCCCEECCCCCCCCC >Mature Secondary Structure MKPEQPSILILGTRGIPAAHGGFETFAERLALFLVARGWKVGVYCQEEVERVDQRVRLDS CCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCC WRGIDLIHVQVASEGPRATLEFDWQCVLDAARRPGVCLVLGYNGAVFLTWLRLMRRKVIT CCCEEEEEEEEECCCCCEEEEECHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHC NMDGIEWRRPKWGRAARTWFWLNEWIGAWASHRLVADHPVIADHLATRRPRSAISTIAYG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHCCCCHHHHHHHHCC ADPVTSAPEAPVRALGLEPGKYLISIARIEPDNSILPIVEAFCSKKRDMKLVVLGTLSDQ CCCCCCCCCCCHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCEEEEEEECCCCC IPYHVAVRKAANASVVLPGAIYDQAAVKALRYHARAYMHGHTVGGTNPSLVEALAAGNMV CCEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHCCCEE IAHDNPYNRWVAGAAAIYFTDTQSCAERMQQAMEDDVLVKACGEAARTRAREAFRWEDVL EEECCCCHHHHHCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAYENEAYRLLGVTSDRTAAIDRPSPGAV HHHCCCCEEEEEECCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA