| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471952
Identifier: 13471952
GI number: 13471952
Start: 1707462
End: 1708736
Strand: Direct
Name: 13471952
Synonym: mlr2086
Alternate gene names: NA
Gene position: 1707462-1708736 (Clockwise)
Preceding gene: 13471951
Following gene: 13471955
Centisome position: 24.27
GC content: 68.86
Gene sequence:
>1275_bases ATGACGGGCTGGTCGCGCCGGCGGCTTCTCACCACCGCGCTGTCGACAGCGCTGGTGCCCGCCGCCGCATCGCTGGCGCC ACTTTCCACCTCCTCCGCCCTTGCCGCCAATAGCGAATGGCGTTTCCGCCGCGGCGTCAACGCCTGGCCCTGGTTCGCGC TGACACGCGAATTTCCCGCACCGCGCACCGACTATGACTGGCCGCCCTTCCAGTCGCAGCGGCCGGTGCCGACCCCGGAC GACCTTGGTCGGCTACGCCAGACCGGGCTCGATTTCATCCGCCTGCCCGTCGATCCCGGCCCGTTCCTCGCTGGAGACGA CGCCACGCGCGGCAAATTGCTGGACATGCTGGACGCCGCCGTCGCCGTCACGCTCGACGCCGGCCTCGGCATCATCGTCA ACGTCCAGGCCAATGGCGCCACCCATTACTGGAACCCCGATCGCATGCTTTCCAGCACCGAGGCTCCGGCCTTCCACCTC TACCGGGCGCTGGTCGGCGAGCTTGCCGGCAGGCTGGCGCGCTTCGCCCCAGGCATGGTGGCGCTGGAACCGGTCAACGA ACCGGCACAATCCTGCGATTCCAACGTCTGGTCGCAGGTCCAGGCATCCCTGCTGACGGCGGCCCGGGCGTCATCCCGCA CCTTACCGCTGGTCGTCACCGGCGGCTGCGGCTCGATGGTGAGCGGGCTGGCGGCACTCGATCCGGCGCCGCTGGCATCC TTCGAGCCGATCCTGTTCACCTTCCACTTCTACGAGCCCTATCTGTTCAGCCACCAGGGCGCGCCCTGGATGCGCGAGCC GGTCTACCGTTCGCTGAACAATGTGCCGTGGCCGGCCTCCGCCGGTTCGCTCGACGCGACGCTCGCCTCGGTCAGGGCGC GCATGGCGCAGGATAGCGAGACCCCGGAAGCGGACAAGCAGGCCGCCTATGCCGAAACCGAGCGCGTGCTGAAAGTCTAT TTCGACGCCCGGCCCGACCGCTGGTTCATCGACAAATATCTCGGCCAGGCGCGCGCCTGGGCCGATGCCCACGGCATCGC CCCGGAACGCGTCATCATGGGCGAATTCGGCGCGCTGCGCACCGATGCCCGCTATGTGGCGGCGCCCAACCCCGACCGCG CCCGCTACATATCAGATGTCCGCCAGAGCGCCGAGGCGGCCGGTTTCCCCTGGGCCTTCTGGGACCTCTTCGACGGCATG GGCATGATGGACGACACCACGCGGGCGCTGGACCCGGCAATCGTCGAAGCGCTGGGGTTGAGGATGCCGGGGTAG
Upstream 100 bases:
>100_bases GGGAGGATGTGCTGCAGGCCTACGAGAATGAAGCCTACCGGCTGCTCGGCGTGACATCAGACCGAACGGCCGCTATCGAC CGCCCCTCGCCCGGCGCGGT
Downstream 100 bases:
>100_bases CGCCGACCGTCGAGATTAGCCGAAAGCTTCGTCGCTTCGTCATCCTAGGGCGGAGCAAGGAGCGAAGCGACGCGGCGCAG ACCCTAGGATGACGAGACGC
Product: cellulase
Products: NA
Alternate protein names: Cellulase; Glycosyl Hydrolase Cellulase Family
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MTGWSRRRLLTTALSTALVPAAASLAPLSTSSALAANSEWRFRRGVNAWPWFALTREFPAPRTDYDWPPFQSQRPVPTPD DLGRLRQTGLDFIRLPVDPGPFLAGDDATRGKLLDMLDAAVAVTLDAGLGIIVNVQANGATHYWNPDRMLSSTEAPAFHL YRALVGELAGRLARFAPGMVALEPVNEPAQSCDSNVWSQVQASLLTAARASSRTLPLVVTGGCGSMVSGLAALDPAPLAS FEPILFTFHFYEPYLFSHQGAPWMREPVYRSLNNVPWPASAGSLDATLASVRARMAQDSETPEADKQAAYAETERVLKVY FDARPDRWFIDKYLGQARAWADAHGIAPERVIMGEFGALRTDARYVAAPNPDRARYISDVRQSAEAAGFPWAFWDLFDGM GMMDDTTRALDPAIVEALGLRMPG
Sequences:
>Translated_424_residues MTGWSRRRLLTTALSTALVPAAASLAPLSTSSALAANSEWRFRRGVNAWPWFALTREFPAPRTDYDWPPFQSQRPVPTPD DLGRLRQTGLDFIRLPVDPGPFLAGDDATRGKLLDMLDAAVAVTLDAGLGIIVNVQANGATHYWNPDRMLSSTEAPAFHL YRALVGELAGRLARFAPGMVALEPVNEPAQSCDSNVWSQVQASLLTAARASSRTLPLVVTGGCGSMVSGLAALDPAPLAS FEPILFTFHFYEPYLFSHQGAPWMREPVYRSLNNVPWPASAGSLDATLASVRARMAQDSETPEADKQAAYAETERVLKVY FDARPDRWFIDKYLGQARAWADAHGIAPERVIMGEFGALRTDARYVAAPNPDRARYISDVRQSAEAAGFPWAFWDLFDGM GMMDDTTRALDPAIVEALGLRMPG >Mature_423_residues TGWSRRRLLTTALSTALVPAAASLAPLSTSSALAANSEWRFRRGVNAWPWFALTREFPAPRTDYDWPPFQSQRPVPTPDD LGRLRQTGLDFIRLPVDPGPFLAGDDATRGKLLDMLDAAVAVTLDAGLGIIVNVQANGATHYWNPDRMLSSTEAPAFHLY RALVGELAGRLARFAPGMVALEPVNEPAQSCDSNVWSQVQASLLTAARASSRTLPLVVTGGCGSMVSGLAALDPAPLASF EPILFTFHFYEPYLFSHQGAPWMREPVYRSLNNVPWPASAGSLDATLASVRARMAQDSETPEADKQAAYAETERVLKVYF DARPDRWFIDKYLGQARAWADAHGIAPERVIMGEFGALRTDARYVAAPNPDRARYISDVRQSAEAAGFPWAFWDLFDGMG MMDDTTRALDPAIVEALGLRMPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46343; Mature: 46212
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGWSRRRLLTTALSTALVPAAASLAPLSTSSALAANSEWRFRRGVNAWPWFALTREFPA CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHCCCCCCCHHHHHCCCCC PRTDYDWPPFQSQRPVPTPDDLGRLRQTGLDFIRLPVDPGPFLAGDDATRGKLLDMLDAA CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHH VAVTLDAGLGIIVNVQANGATHYWNPDRMLSSTEAPAFHLYRALVGELAGRLARFAPGMV HHEEEECCCEEEEEEEECCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCE ALEPVNEPAQSCDSNVWSQVQASLLTAARASSRTLPLVVTGGCGSMVSGLAALDPAPLAS EECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCC FEPILFTFHFYEPYLFSHQGAPWMREPVYRSLNNVPWPASAGSLDATLASVRARMAQDSE CCCEEEEEECCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC TPEADKQAAYAETERVLKVYFDARPDRWFIDKYLGQARAWADAHGIAPERVIMGEFGALR CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCC TDARYVAAPNPDRARYISDVRQSAEAAGFPWAFWDLFDGMGMMDDTTRALDPAIVEALGL CCCEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC RMPG CCCC >Mature Secondary Structure TGWSRRRLLTTALSTALVPAAASLAPLSTSSALAANSEWRFRRGVNAWPWFALTREFPA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHCCCCCCCHHHHHCCCCC PRTDYDWPPFQSQRPVPTPDDLGRLRQTGLDFIRLPVDPGPFLAGDDATRGKLLDMLDAA CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHH VAVTLDAGLGIIVNVQANGATHYWNPDRMLSSTEAPAFHLYRALVGELAGRLARFAPGMV HHEEEECCCEEEEEEEECCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCE ALEPVNEPAQSCDSNVWSQVQASLLTAARASSRTLPLVVTGGCGSMVSGLAALDPAPLAS EECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCC FEPILFTFHFYEPYLFSHQGAPWMREPVYRSLNNVPWPASAGSLDATLASVRARMAQDSE CCCEEEEEECCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC TPEADKQAAYAETERVLKVYFDARPDRWFIDKYLGQARAWADAHGIAPERVIMGEFGALR CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCC TDARYVAAPNPDRARYISDVRQSAEAAGFPWAFWDLFDGMGMMDDTTRALDPAIVEALGL CCCEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC RMPG CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA