| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471930
Identifier: 13471930
GI number: 13471930
Start: 1685143
End: 1685883
Strand: Direct
Name: 13471930
Synonym: mlr2056
Alternate gene names: NA
Gene position: 1685143-1685883 (Clockwise)
Preceding gene: 13471927
Following gene: 13471931
Centisome position: 23.95
GC content: 61.54
Gene sequence:
>741_bases ATGACGCTCAAACTGATCGGAGCCGGTTTCGGCCGCACCGGCACGTGGTCGACTTTTGCCGCGCTGAACAGGCTCGGCCT GCCCTGCTATCACATGCAGGAAGTGATTATGAACAAGGCCAACAAGGGCCATCTCGATTTCTGGCGCAAGGTCGCCAACA GCCCGCCCGGCAGCCAGCATGACTGGAACCGCGTCTTCGCCAACTATACGGCGACCGTCGACAATCCCGGCTGCTGCGTG TGGAAGGAATTGCTGGCCGCCTACCCCGACGCCAAGGTGCTCTTGACCCTGCATCCGCGCGGCGCCGAGGCGTGGTACGA AAGCACGATCGACACGATCTACTTCACCGAGAATGTCTGGCAATTCAAGATCCTGGAATGGCTGACGCCCTTCGGTTGGA AATTCGGCGACATGTCGCGCAAGCTGATATGGGGCCGCACGCTGGACGGCGTGATGAACGACCGCGCCAAGGCGGTGGCG CGCTACAACACCTATGTCGAGCAGGTGAAGGCCGCGGTGCCGCCGCACAAGCTGCTGGTCTACAAGGTGACCGAAGGCTG GGCGCCGCTCTGCGATTTCCTCGGTGTGGCGCTGCCCAACGAACCCTTCCCCAACCTCAACGACCGCGAGACGATCAAGA AGATCATCCGCGACATCATCAAGGGGTCGTATATCATGCTGGGGCTGGCAATCGCTGCCATAGTGGCGGTGGTCGCAGCG CTGTGGTGGTGGCTAGGCTAG
Upstream 100 bases:
>100_bases GTAACCACCCTCGAAATTTGTTGCGCGCTGACCCGGTCAGGAGCAATTTGATGCTCACGGACTGAGGTAATGCAGAAAAC AAGTCCGGGGGGATGGGGAA
Downstream 100 bases:
>100_bases TCACACCCGCACGCTCAAGTCCGAAGGCGTCCGAATCCCTAGCTGCGAGGACCGGGAACTAACCATCGCACCCCGAGTTT CGCTTTCAGTCTTTCAAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MTLKLIGAGFGRTGTWSTFAALNRLGLPCYHMQEVIMNKANKGHLDFWRKVANSPPGSQHDWNRVFANYTATVDNPGCCV WKELLAAYPDAKVLLTLHPRGAEAWYESTIDTIYFTENVWQFKILEWLTPFGWKFGDMSRKLIWGRTLDGVMNDRAKAVA RYNTYVEQVKAAVPPHKLLVYKVTEGWAPLCDFLGVALPNEPFPNLNDRETIKKIIRDIIKGSYIMLGLAIAAIVAVVAA LWWWLG
Sequences:
>Translated_246_residues MTLKLIGAGFGRTGTWSTFAALNRLGLPCYHMQEVIMNKANKGHLDFWRKVANSPPGSQHDWNRVFANYTATVDNPGCCV WKELLAAYPDAKVLLTLHPRGAEAWYESTIDTIYFTENVWQFKILEWLTPFGWKFGDMSRKLIWGRTLDGVMNDRAKAVA RYNTYVEQVKAAVPPHKLLVYKVTEGWAPLCDFLGVALPNEPFPNLNDRETIKKIIRDIIKGSYIMLGLAIAAIVAVVAA LWWWLG >Mature_245_residues TLKLIGAGFGRTGTWSTFAALNRLGLPCYHMQEVIMNKANKGHLDFWRKVANSPPGSQHDWNRVFANYTATVDNPGCCVW KELLAAYPDAKVLLTLHPRGAEAWYESTIDTIYFTENVWQFKILEWLTPFGWKFGDMSRKLIWGRTLDGVMNDRAKAVAR YNTYVEQVKAAVPPHKLLVYKVTEGWAPLCDFLGVALPNEPFPNLNDRETIKKIIRDIIKGSYIMLGLAIAAIVAVVAAL WWWLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27890; Mature: 27758
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKLIGAGFGRTGTWSTFAALNRLGLPCYHMQEVIMNKANKGHLDFWRKVANSPPGSQH CEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCC DWNRVFANYTATVDNPGCCVWKELLAAYPDAKVLLTLHPRGAEAWYESTIDTIYFTENVW HHHHHHHHEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCEEEEECCCH QFKILEWLTPFGWKFGDMSRKLIWGRTLDGVMNDRAKAVARYNTYVEQVKAAVPPHKLLV HHHHHHHHCCCCCCHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE YKVTEGWAPLCDFLGVALPNEPFPNLNDRETIKKIIRDIIKGSYIMLGLAIAAIVAVVAA EEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LWWWLG HHHHCC >Mature Secondary Structure TLKLIGAGFGRTGTWSTFAALNRLGLPCYHMQEVIMNKANKGHLDFWRKVANSPPGSQH EEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCC DWNRVFANYTATVDNPGCCVWKELLAAYPDAKVLLTLHPRGAEAWYESTIDTIYFTENVW HHHHHHHHEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCEEEEECCCH QFKILEWLTPFGWKFGDMSRKLIWGRTLDGVMNDRAKAVARYNTYVEQVKAAVPPHKLLV HHHHHHHHCCCCCCHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE YKVTEGWAPLCDFLGVALPNEPFPNLNDRETIKKIIRDIIKGSYIMLGLAIAAIVAVVAA EEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LWWWLG HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA