| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yghU [H]
Identifier: 13471927
GI number: 13471927
Start: 1682751
End: 1683662
Strand: Direct
Name: yghU [H]
Synonym: mlr2052
Alternate gene names: 13471927
Gene position: 1682751-1683662 (Clockwise)
Preceding gene: 13471924
Following gene: 13471930
Centisome position: 23.92
GC content: 63.05
Gene sequence:
>912_bases ATGTGTCCGCTCAATCCCGTCCTTCCCTTCCCCATGAGGCCCGACATGACAGACTACACCCCGCCGAAAGTATGGACCTG GAACAAGGCAAATGGCGGCACCTTTGCCAGCATCAACCGTCCGATCGCCGGGCCGACGCATGACAAGGAATTGCCCATCG GCAAGCACCCCTTGCAGCTTTATTCGCTGGCAACGCCGAACGGCGTCAAAGTCACGGTGATGCTGGAGGAACTTCTGGCG CTGGGCCACAAGGGCGCCGAATACGACGCCTGGCTCATCCGGATCAACGAAGGCGACCAGTTCGGCAGCGGCTTCGTCGA GGTCAATCCCAACTCCAAGATCCCGGCCCTGATGGACCGCAGCGGCGCCACCCCGGTGCGCATCTTCGAATCCGGCTCGA TCCTGGTCTATCTCGCCGAAAAGTTCGGCGAATTCCTGCCCACCGAGCAGCCGGCGCGCGCGGAAGTCCTGTCCTGGCTG TTCTGGCAGATGGGTTCGGCGCCGTATCTGGGCGGCGGCTTCGGCCATTTCTATGCCTACGCGCCGCAGAAATTCGAATA TGCCATCGACCGCTTCGCCATGGAAACCAAGCGGCAGCTCGATGTGCTCGACCGCCGGCTGGCCGAAACTGAATATCTCG GCGGCAAGGACTACACGATCGCCGACATGGCGGTGTGGCCCTGGTATGGCGGGCTGGCGCTCGGGCGCATGTACAATGAT TCCGGCGAGTTCCTGTCCGTGCAGGAATACAAGCACGTCCAGCGCTGGGCGAAGGCGATCGACGCCCGCCCGGCGGTCAA GCGCGGCCGCATGGTCAACCGCGCCTTCGGCGAGCCGGCCATGCAGTTGCATGAGCGCCACGACGCCAGCGATTTCGACA CGAATACGCAGGACAAGCTCGCCGCCGAATAG
Upstream 100 bases:
>100_bases TTCTTCCTTCTCCCCCTGTGGGAGAAGGACAAGCGCAGCACCCGCATAAAACAATAGTTCAATGCAAGTTGAACTTCCAC CTCCGCAGCCCTAGCTATAG
Downstream 100 bases:
>100_bases GCGGCGGCAAGGCTGACAAGAAAAACCCGCCACCAGATTGGTAGCGGGTTTTTCAAATGCCAGATGTTGAACCAGTTAGT GCAGCACTTCGACGATCTGA
Product: putative glutathione S-transferase YghU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MCPLNPVLPFPMRPDMTDYTPPKVWTWNKANGGTFASINRPIAGPTHDKELPIGKHPLQLYSLATPNGVKVTVMLEELLA LGHKGAEYDAWLIRINEGDQFGSGFVEVNPNSKIPALMDRSGATPVRIFESGSILVYLAEKFGEFLPTEQPARAEVLSWL FWQMGSAPYLGGGFGHFYAYAPQKFEYAIDRFAMETKRQLDVLDRRLAETEYLGGKDYTIADMAVWPWYGGLALGRMYND SGEFLSVQEYKHVQRWAKAIDARPAVKRGRMVNRAFGEPAMQLHERHDASDFDTNTQDKLAAE
Sequences:
>Translated_303_residues MCPLNPVLPFPMRPDMTDYTPPKVWTWNKANGGTFASINRPIAGPTHDKELPIGKHPLQLYSLATPNGVKVTVMLEELLA LGHKGAEYDAWLIRINEGDQFGSGFVEVNPNSKIPALMDRSGATPVRIFESGSILVYLAEKFGEFLPTEQPARAEVLSWL FWQMGSAPYLGGGFGHFYAYAPQKFEYAIDRFAMETKRQLDVLDRRLAETEYLGGKDYTIADMAVWPWYGGLALGRMYND SGEFLSVQEYKHVQRWAKAIDARPAVKRGRMVNRAFGEPAMQLHERHDASDFDTNTQDKLAAE >Mature_303_residues MCPLNPVLPFPMRPDMTDYTPPKVWTWNKANGGTFASINRPIAGPTHDKELPIGKHPLQLYSLATPNGVKVTVMLEELLA LGHKGAEYDAWLIRINEGDQFGSGFVEVNPNSKIPALMDRSGATPVRIFESGSILVYLAEKFGEFLPTEQPARAEVLSWL FWQMGSAPYLGGGFGHFYAYAPQKFEYAIDRFAMETKRQLDVLDRRLAETEYLGGKDYTIADMAVWPWYGGLALGRMYND SGEFLSVQEYKHVQRWAKAIDARPAVKRGRMVNRAFGEPAMQLHERHDASDFDTNTQDKLAAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI87082195, Length=286, Percent_Identity=68.8811188811189, Blast_Score=416, Evalue=1e-118, Organism=Escherichia coli, GI1788640, Length=214, Percent_Identity=42.0560747663551, Blast_Score=159, Evalue=3e-40, Organism=Escherichia coli, GI87081789, Length=187, Percent_Identity=28.3422459893048, Blast_Score=67, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324100, Length=260, Percent_Identity=29.6153846153846, Blast_Score=93, Evalue=6e-20, Organism=Drosophila melanogaster, GI17864592, Length=202, Percent_Identity=26.2376237623762, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 34095; Mature: 34095
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCPLNPVLPFPMRPDMTDYTPPKVWTWNKANGGTFASINRPIAGPTHDKELPIGKHPLQL CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEE YSLATPNGVKVTVMLEELLALGHKGAEYDAWLIRINEGDQFGSGFVEVNPNSKIPALMDR EEECCCCCCEEEHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCHHHCC SGATPVRIFESGSILVYLAEKFGEFLPTEQPARAEVLSWLFWQMGSAPYLGGGFGHFYAY CCCCEEEEEECCCEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHEEE APQKFEYAIDRFAMETKRQLDVLDRRLAETEYLGGKDYTIADMAVWPWYGGLALGRMYND CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHEECC SGEFLSVQEYKHVQRWAKAIDARPAVKRGRMVNRAFGEPAMQLHERHDASDFDTNTQDKL CCCEEEHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHCCHHHHHHHHCCCCCCCCCCCHHH AAE CCC >Mature Secondary Structure MCPLNPVLPFPMRPDMTDYTPPKVWTWNKANGGTFASINRPIAGPTHDKELPIGKHPLQL CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEE YSLATPNGVKVTVMLEELLALGHKGAEYDAWLIRINEGDQFGSGFVEVNPNSKIPALMDR EEECCCCCCEEEHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCHHHCC SGATPVRIFESGSILVYLAEKFGEFLPTEQPARAEVLSWLFWQMGSAPYLGGGFGHFYAY CCCCEEEEEECCCEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHEEE APQKFEYAIDRFAMETKRQLDVLDRRLAETEYLGGKDYTIADMAVWPWYGGLALGRMYND CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHEECC SGEFLSVQEYKHVQRWAKAIDARPAVKRGRMVNRAFGEPAMQLHERHDASDFDTNTQDKL CCCEEEHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHCCHHHHHHHHCCCCCCCCCCCHHH AAE CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]