Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is yghU [H]

Identifier: 13471927

GI number: 13471927

Start: 1682751

End: 1683662

Strand: Direct

Name: yghU [H]

Synonym: mlr2052

Alternate gene names: 13471927

Gene position: 1682751-1683662 (Clockwise)

Preceding gene: 13471924

Following gene: 13471930

Centisome position: 23.92

GC content: 63.05

Gene sequence:

>912_bases
ATGTGTCCGCTCAATCCCGTCCTTCCCTTCCCCATGAGGCCCGACATGACAGACTACACCCCGCCGAAAGTATGGACCTG
GAACAAGGCAAATGGCGGCACCTTTGCCAGCATCAACCGTCCGATCGCCGGGCCGACGCATGACAAGGAATTGCCCATCG
GCAAGCACCCCTTGCAGCTTTATTCGCTGGCAACGCCGAACGGCGTCAAAGTCACGGTGATGCTGGAGGAACTTCTGGCG
CTGGGCCACAAGGGCGCCGAATACGACGCCTGGCTCATCCGGATCAACGAAGGCGACCAGTTCGGCAGCGGCTTCGTCGA
GGTCAATCCCAACTCCAAGATCCCGGCCCTGATGGACCGCAGCGGCGCCACCCCGGTGCGCATCTTCGAATCCGGCTCGA
TCCTGGTCTATCTCGCCGAAAAGTTCGGCGAATTCCTGCCCACCGAGCAGCCGGCGCGCGCGGAAGTCCTGTCCTGGCTG
TTCTGGCAGATGGGTTCGGCGCCGTATCTGGGCGGCGGCTTCGGCCATTTCTATGCCTACGCGCCGCAGAAATTCGAATA
TGCCATCGACCGCTTCGCCATGGAAACCAAGCGGCAGCTCGATGTGCTCGACCGCCGGCTGGCCGAAACTGAATATCTCG
GCGGCAAGGACTACACGATCGCCGACATGGCGGTGTGGCCCTGGTATGGCGGGCTGGCGCTCGGGCGCATGTACAATGAT
TCCGGCGAGTTCCTGTCCGTGCAGGAATACAAGCACGTCCAGCGCTGGGCGAAGGCGATCGACGCCCGCCCGGCGGTCAA
GCGCGGCCGCATGGTCAACCGCGCCTTCGGCGAGCCGGCCATGCAGTTGCATGAGCGCCACGACGCCAGCGATTTCGACA
CGAATACGCAGGACAAGCTCGCCGCCGAATAG

Upstream 100 bases:

>100_bases
TTCTTCCTTCTCCCCCTGTGGGAGAAGGACAAGCGCAGCACCCGCATAAAACAATAGTTCAATGCAAGTTGAACTTCCAC
CTCCGCAGCCCTAGCTATAG

Downstream 100 bases:

>100_bases
GCGGCGGCAAGGCTGACAAGAAAAACCCGCCACCAGATTGGTAGCGGGTTTTTCAAATGCCAGATGTTGAACCAGTTAGT
GCAGCACTTCGACGATCTGA

Product: putative glutathione S-transferase YghU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MCPLNPVLPFPMRPDMTDYTPPKVWTWNKANGGTFASINRPIAGPTHDKELPIGKHPLQLYSLATPNGVKVTVMLEELLA
LGHKGAEYDAWLIRINEGDQFGSGFVEVNPNSKIPALMDRSGATPVRIFESGSILVYLAEKFGEFLPTEQPARAEVLSWL
FWQMGSAPYLGGGFGHFYAYAPQKFEYAIDRFAMETKRQLDVLDRRLAETEYLGGKDYTIADMAVWPWYGGLALGRMYND
SGEFLSVQEYKHVQRWAKAIDARPAVKRGRMVNRAFGEPAMQLHERHDASDFDTNTQDKLAAE

Sequences:

>Translated_303_residues
MCPLNPVLPFPMRPDMTDYTPPKVWTWNKANGGTFASINRPIAGPTHDKELPIGKHPLQLYSLATPNGVKVTVMLEELLA
LGHKGAEYDAWLIRINEGDQFGSGFVEVNPNSKIPALMDRSGATPVRIFESGSILVYLAEKFGEFLPTEQPARAEVLSWL
FWQMGSAPYLGGGFGHFYAYAPQKFEYAIDRFAMETKRQLDVLDRRLAETEYLGGKDYTIADMAVWPWYGGLALGRMYND
SGEFLSVQEYKHVQRWAKAIDARPAVKRGRMVNRAFGEPAMQLHERHDASDFDTNTQDKLAAE
>Mature_303_residues
MCPLNPVLPFPMRPDMTDYTPPKVWTWNKANGGTFASINRPIAGPTHDKELPIGKHPLQLYSLATPNGVKVTVMLEELLA
LGHKGAEYDAWLIRINEGDQFGSGFVEVNPNSKIPALMDRSGATPVRIFESGSILVYLAEKFGEFLPTEQPARAEVLSWL
FWQMGSAPYLGGGFGHFYAYAPQKFEYAIDRFAMETKRQLDVLDRRLAETEYLGGKDYTIADMAVWPWYGGLALGRMYND
SGEFLSVQEYKHVQRWAKAIDARPAVKRGRMVNRAFGEPAMQLHERHDASDFDTNTQDKLAAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI87082195, Length=286, Percent_Identity=68.8811188811189, Blast_Score=416, Evalue=1e-118,
Organism=Escherichia coli, GI1788640, Length=214, Percent_Identity=42.0560747663551, Blast_Score=159, Evalue=3e-40,
Organism=Escherichia coli, GI87081789, Length=187, Percent_Identity=28.3422459893048, Blast_Score=67, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6324100, Length=260, Percent_Identity=29.6153846153846, Blast_Score=93, Evalue=6e-20,
Organism=Drosophila melanogaster, GI17864592, Length=202, Percent_Identity=26.2376237623762, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010987
- InterPro:   IPR004045
- InterPro:   IPR017933
- InterPro:   IPR004046
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]

EC number: NA

Molecular weight: Translated: 34095; Mature: 34095

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCPLNPVLPFPMRPDMTDYTPPKVWTWNKANGGTFASINRPIAGPTHDKELPIGKHPLQL
CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEE
YSLATPNGVKVTVMLEELLALGHKGAEYDAWLIRINEGDQFGSGFVEVNPNSKIPALMDR
EEECCCCCCEEEHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCHHHCC
SGATPVRIFESGSILVYLAEKFGEFLPTEQPARAEVLSWLFWQMGSAPYLGGGFGHFYAY
CCCCEEEEEECCCEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHEEE
APQKFEYAIDRFAMETKRQLDVLDRRLAETEYLGGKDYTIADMAVWPWYGGLALGRMYND
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHEECC
SGEFLSVQEYKHVQRWAKAIDARPAVKRGRMVNRAFGEPAMQLHERHDASDFDTNTQDKL
CCCEEEHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHCCHHHHHHHHCCCCCCCCCCCHHH
AAE
CCC
>Mature Secondary Structure
MCPLNPVLPFPMRPDMTDYTPPKVWTWNKANGGTFASINRPIAGPTHDKELPIGKHPLQL
CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEE
YSLATPNGVKVTVMLEELLALGHKGAEYDAWLIRINEGDQFGSGFVEVNPNSKIPALMDR
EEECCCCCCEEEHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCHHHCC
SGATPVRIFESGSILVYLAEKFGEFLPTEQPARAEVLSWLFWQMGSAPYLGGGFGHFYAY
CCCCEEEEEECCCEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHEEE
APQKFEYAIDRFAMETKRQLDVLDRRLAETEYLGGKDYTIADMAVWPWYGGLALGRMYND
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHEECC
SGEFLSVQEYKHVQRWAKAIDARPAVKRGRMVNRAFGEPAMQLHERHDASDFDTNTQDKL
CCCEEEHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHCCHHHHHHHHCCCCCCCCCCCHHH
AAE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]