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The map label for this gene is yagT [H]

Identifier: 13471825

GI number: 13471825

Start: 1581586

End: 1582059

Strand: Direct

Name: yagT [H]

Synonym: mlr1925

Alternate gene names: 13471825

Gene position: 1581586-1582059 (Clockwise)

Preceding gene: 13471815

Following gene: 13471826

Centisome position: 22.48

GC content: 66.24

Gene sequence:

>474_bases
ATGACGAAAATCCCCGTCCATCTCGATATCAACGGCCAGCACCACGAGTTGCAGCTCGAACCGCGCGTCACGCTGCTCGA
TGCCTTGCGCGAGCGGCTCGGCCTGACCGGCACCAAGAAGGGCTGCGACCATGGCCAGTGCGGCGCCTGCACCGTGCACA
TAGACGGCGAGCGCGTGCTGGCTTGCCTGACGCTGGCCGCGCAAGCCGAAGGCCGCGCCATCACCACCATTGAGGGGCTT
GCACGGGAGGGCGAATTGCATCCCGTGCAGGCTGCCTTCCTCGAACAGGACGCCTTCCAGTGCGGCTATTGCACGCCGGG
CCAGATCATGTCGGCGGTGGCCTGCATCCGCGAGGGCCATGCCGGCTCGGACGAAGAAATCCGCGAATACATGGCCGGCA
ATCTCTGCCGCTGCGGCGCCTATCCGCACATCGTCGCCGCCGTCCGCCAGGCAGCCCAGGAGTTCGCATCATGA

Upstream 100 bases:

>100_bases
CAGCGCTTCCGCCAACACCTAGCCGTCCGCCCCCCTTGCCCTTGCCCGCCTCGACACCAATTCCTTCCCCTCAGCGTCAA
GCAACTGGAGCCAGACGCCC

Downstream 100 bases:

>100_bases
GGGATTTTTCCTACCTGCGCGCCAGTTCGGCTGACGCCGCCCGCCAGGCGGCTGCCCTGCCCGGCGCCATGCTGCTCGCC
GGCGGCACCACGCTGATCGA

Product: oxidoreductase, iron-sulphur binding subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MTKIPVHLDINGQHHELQLEPRVTLLDALRERLGLTGTKKGCDHGQCGACTVHIDGERVLACLTLAAQAEGRAITTIEGL
AREGELHPVQAAFLEQDAFQCGYCTPGQIMSAVACIREGHAGSDEEIREYMAGNLCRCGAYPHIVAAVRQAAQEFAS

Sequences:

>Translated_157_residues
MTKIPVHLDINGQHHELQLEPRVTLLDALRERLGLTGTKKGCDHGQCGACTVHIDGERVLACLTLAAQAEGRAITTIEGL
AREGELHPVQAAFLEQDAFQCGYCTPGQIMSAVACIREGHAGSDEEIREYMAGNLCRCGAYPHIVAAVRQAAQEFAS
>Mature_156_residues
TKIPVHLDINGQHHELQLEPRVTLLDALRERLGLTGTKKGCDHGQCGACTVHIDGERVLACLTLAAQAEGRAITTIEGLA
REGELHPVQAAFLEQDAFQCGYCTPGQIMSAVACIREGHAGSDEEIREYMAGNLCRCGAYPHIVAAVRQAAQEFAS

Specific function: Iron-sulfur subunit of the xanthine dehydrogenase complex [H]

COG id: COG2080

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI91823271, Length=149, Percent_Identity=39.5973154362416, Blast_Score=81, Evalue=4e-16,
Organism=Homo sapiens, GI71773480, Length=90, Percent_Identity=35.5555555555556, Blast_Score=67, Evalue=6e-12,
Organism=Escherichia coli, GI1786480, Length=169, Percent_Identity=53.2544378698225, Blast_Score=180, Evalue=4e-47,
Organism=Escherichia coli, GI1789232, Length=147, Percent_Identity=45.578231292517, Blast_Score=117, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17540638, Length=149, Percent_Identity=38.255033557047, Blast_Score=105, Evalue=9e-24,
Organism=Caenorhabditis elegans, GI17539860, Length=159, Percent_Identity=34.5911949685535, Blast_Score=101, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI32566215, Length=160, Percent_Identity=33.125, Blast_Score=99, Evalue=1e-21,
Organism=Drosophila melanogaster, GI17737937, Length=159, Percent_Identity=40.251572327044, Blast_Score=104, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24647193, Length=160, Percent_Identity=33.75, Blast_Score=87, Evalue=5e-18,
Organism=Drosophila melanogaster, GI24647201, Length=153, Percent_Identity=35.9477124183007, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24647197, Length=163, Percent_Identity=33.7423312883436, Blast_Score=84, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24647195, Length=163, Percent_Identity=33.7423312883436, Blast_Score=84, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24647199, Length=140, Percent_Identity=34.2857142857143, Blast_Score=81, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002888
- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]

EC number: NA

Molecular weight: Translated: 16893; Mature: 16762

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
5.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKIPVHLDINGQHHELQLEPRVTLLDALRERLGLTGTKKGCDHGQCGACTVHIDGERVL
CCCEEEEEEECCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHH
ACLTLAAQAEGRAITTIEGLAREGELHPVQAAFLEQDAFQCGYCTPGQIMSAVACIREGH
HHHHHHHHCCCCEEEHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC
AGSDEEIREYMAGNLCRCGAYPHIVAAVRQAAQEFAS
CCCHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TKIPVHLDINGQHHELQLEPRVTLLDALRERLGLTGTKKGCDHGQCGACTVHIDGERVL
CCEEEEEEECCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHH
ACLTLAAQAEGRAITTIEGLAREGELHPVQAAFLEQDAFQCGYCTPGQIMSAVACIREGH
HHHHHHHHCCCCEEEHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC
AGSDEEIREYMAGNLCRCGAYPHIVAAVRQAAQEFAS
CCCHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]