| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471702
Identifier: 13471702
GI number: 13471702
Start: 1464776
End: 1465555
Strand: Direct
Name: 13471702
Synonym: mlr1753
Alternate gene names: NA
Gene position: 1464776-1465555 (Clockwise)
Preceding gene: 13471698
Following gene: 13471709
Centisome position: 20.82
GC content: 60.64
Gene sequence:
>780_bases ATGACGCGTTGGAAAGGTGTGGGCGTGGCGGCGATAGCCGCATTGTCGTTCGTTGCGCTGAAGGTGTTGCCCTGGGCGCT CGGCTTTGCCGGCGGCAAATATCTCTATCAGACTGTGGCGGGCTCGCCCGATCCGCAAATGCTGACCACGGCTCAGGTGA GCGAACAGATTGAGAGCCAGGGGAGCCAGATATTCAAAGCAATCAAGCAGGAATTCCCAGAAGACTACGACGCCGTCGTG GAAAAGATCACGGCCGTGGCCAGACTGGGAAATGTCGACCAGGTGCGAAACACCAGCAGGGTGGCGGTGGCCGATCTCAG GCAACGATACGCATCCCTTCTGTCCTCGGCTCCGGACAGCAAGGCTGCGGAAGCCCTGCGCGCGCAATTGGACATGCTCA ACCATGTCATGGCGCGGGAAACAGCTGCCACCTGTGACAACTACCTTCGCCAGGGGCCGGGCGCGCTCAGCACGCCGGAC CAGGATTTTCTGGGTGACATGGACAAGATAGGCGCCACCCTGTTCCACGCTTTCGGCGCGGCGAAAAAGGGCGGTCTGCC GGCCGCTTCGGCCAGCGACGAAGACTGGTCGCTGCTGGCCGACGCTTTCATCAAGGCTGGCGGCACTCCCGTCGAGATGA ATGCCATTGCCAATGTCAGCCTGGAATTCGAAGGTCTCTGCCCGGCCGTCGCGAAACTTTATACGTCTGCTCTGTCGCTG CAGGGTGAGCCCGGGCGGCATATCAAAACCACTTTGCTCTATGAGATCGCCCGGAACTAG
Upstream 100 bases:
>100_bases GCGATAGGATTGCGCGTAGAACGCGCGAAGCGCCGAGGCCGACCGCGAGAAGGCGCTGAGCCTCGGGCGAAATAGAGACA AGGTTCGGGAGGGCTGGCGG
Downstream 100 bases:
>100_bases TCGGGTCTGCGGATCCGCGCGGTGATCAGGATCTGTCATGCCTGGCGAGCCTCTTTGGCTCGCCAGGCATACCCGGCTTC GAGAGGCCGACTGGCCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MTRWKGVGVAAIAALSFVALKVLPWALGFAGGKYLYQTVAGSPDPQMLTTAQVSEQIESQGSQIFKAIKQEFPEDYDAVV EKITAVARLGNVDQVRNTSRVAVADLRQRYASLLSSAPDSKAAEALRAQLDMLNHVMARETAATCDNYLRQGPGALSTPD QDFLGDMDKIGATLFHAFGAAKKGGLPAASASDEDWSLLADAFIKAGGTPVEMNAIANVSLEFEGLCPAVAKLYTSALSL QGEPGRHIKTTLLYEIARN
Sequences:
>Translated_259_residues MTRWKGVGVAAIAALSFVALKVLPWALGFAGGKYLYQTVAGSPDPQMLTTAQVSEQIESQGSQIFKAIKQEFPEDYDAVV EKITAVARLGNVDQVRNTSRVAVADLRQRYASLLSSAPDSKAAEALRAQLDMLNHVMARETAATCDNYLRQGPGALSTPD QDFLGDMDKIGATLFHAFGAAKKGGLPAASASDEDWSLLADAFIKAGGTPVEMNAIANVSLEFEGLCPAVAKLYTSALSL QGEPGRHIKTTLLYEIARN >Mature_258_residues TRWKGVGVAAIAALSFVALKVLPWALGFAGGKYLYQTVAGSPDPQMLTTAQVSEQIESQGSQIFKAIKQEFPEDYDAVVE KITAVARLGNVDQVRNTSRVAVADLRQRYASLLSSAPDSKAAEALRAQLDMLNHVMARETAATCDNYLRQGPGALSTPDQ DFLGDMDKIGATLFHAFGAAKKGGLPAASASDEDWSLLADAFIKAGGTPVEMNAIANVSLEFEGLCPAVAKLYTSALSLQ GEPGRHIKTTLLYEIARN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27594; Mature: 27462
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRWKGVGVAAIAALSFVALKVLPWALGFAGGKYLYQTVAGSPDPQMLTTAQVSEQIESQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHH GSQIFKAIKQEFPEDYDAVVEKITAVARLGNVDQVRNTSRVAVADLRQRYASLLSSAPDS HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCH KAAEALRAQLDMLNHVMARETAATCDNYLRQGPGALSTPDQDFLGDMDKIGATLFHAFGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHH AKKGGLPAASASDEDWSLLADAFIKAGGTPVEMNAIANVSLEFEGLCPAVAKLYTSALSL HHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHCCCEEECCCCHHHHHHHHHHHHC QGEPGRHIKTTLLYEIARN CCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TRWKGVGVAAIAALSFVALKVLPWALGFAGGKYLYQTVAGSPDPQMLTTAQVSEQIESQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHH GSQIFKAIKQEFPEDYDAVVEKITAVARLGNVDQVRNTSRVAVADLRQRYASLLSSAPDS HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCH KAAEALRAQLDMLNHVMARETAATCDNYLRQGPGALSTPDQDFLGDMDKIGATLFHAFGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHH AKKGGLPAASASDEDWSLLADAFIKAGGTPVEMNAIANVSLEFEGLCPAVAKLYTSALSL HHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHCCCEEECCCCHHHHHHHHHHHHC QGEPGRHIKTTLLYEIARN CCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA