| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471709
Identifier: 13471709
GI number: 13471709
Start: 1471681
End: 1472388
Strand: Direct
Name: 13471709
Synonym: mlr1763
Alternate gene names: NA
Gene position: 1471681-1472388 (Clockwise)
Preceding gene: 13471702
Following gene: 13471717
Centisome position: 20.92
GC content: 64.12
Gene sequence:
>708_bases ATGCGTCACCAGCATGCCGTCATCCATCATCGCGCGTTCGACTTCTGGCTGGCACGCGCGGCGGTTCTCGTCATCATCTG TCTGCAACTCCTGGTGATCAACGATCTCTCGTTCGGCCCGCGCTGGCTGGCGCCGGCGCTGGAGGCCGCCCTGCTCGTGC CCCTGTCCGTTGCCACCGCCTGGACACAGGTCGCCAGCCAGAAAGCGGTCGAGGAGGAGCACTGGTATCTGGTTGGCCGG TTTCGCGTTGTCATCCGCAGGACGGCGCTGGCGATGACCGGTGTCGTCAGCGTTATGAATTGCGGTTCGCTGGTGTTCCT GGTGCGCGCCTTGCTGGCGGGCCATGCCGGGTCCAGCGGCCAGACACTATTGATCGACGCGCTCAACATCTGGGTCACCA ATGTCATCGTCTTTGCCTTGTGGTTCTGGAGCACGGACCGCGGCGGGCCGCCGACCTGCGGCCTGGTCAACCGCGCCCAT TCGGACTTCCTGTTCCCGCAAATGACCCTGAACGACCGCGAGATCCGCGACTGGCTGCCGGGCTTCGTCGATTATTTCTT CCTCGCCTTCACCAATGCGACGGCGTTTTCGCCGACCGACACCTTGCCGCTCTCCCAGCGCGCCAAGCTGTTGATGATGG CCGAGGCGATGATCTCGCTGCTGACGATCGCACTGGTCGCGGCCCGCGCCGTCAACATCCTTGCCTAG
Upstream 100 bases:
>100_bases CATTGCAAGACCAAGATTGGGCGGGAATTTCGGCGCTCCGTTGCCCTCCCCCGGCAGAACAGCCGCCCATTTGATCCTGC CTGAACATCCCGGATATTCG
Downstream 100 bases:
>100_bases GCCCAGAAACAAAAAATAGCCCGCCCGGCGAACCGGAGCGGGCTATTGGATGGTATCCGAGGCTGCGGCCCAGGGTGGAC GATCCTCGCCCTCAATCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MRHQHAVIHHRAFDFWLARAAVLVIICLQLLVINDLSFGPRWLAPALEAALLVPLSVATAWTQVASQKAVEEEHWYLVGR FRVVIRRTALAMTGVVSVMNCGSLVFLVRALLAGHAGSSGQTLLIDALNIWVTNVIVFALWFWSTDRGGPPTCGLVNRAH SDFLFPQMTLNDREIRDWLPGFVDYFFLAFTNATAFSPTDTLPLSQRAKLLMMAEAMISLLTIALVAARAVNILA
Sequences:
>Translated_235_residues MRHQHAVIHHRAFDFWLARAAVLVIICLQLLVINDLSFGPRWLAPALEAALLVPLSVATAWTQVASQKAVEEEHWYLVGR FRVVIRRTALAMTGVVSVMNCGSLVFLVRALLAGHAGSSGQTLLIDALNIWVTNVIVFALWFWSTDRGGPPTCGLVNRAH SDFLFPQMTLNDREIRDWLPGFVDYFFLAFTNATAFSPTDTLPLSQRAKLLMMAEAMISLLTIALVAARAVNILA >Mature_235_residues MRHQHAVIHHRAFDFWLARAAVLVIICLQLLVINDLSFGPRWLAPALEAALLVPLSVATAWTQVASQKAVEEEHWYLVGR FRVVIRRTALAMTGVVSVMNCGSLVFLVRALLAGHAGSSGQTLLIDALNIWVTNVIVFALWFWSTDRGGPPTCGLVNRAH SDFLFPQMTLNDREIRDWLPGFVDYFFLAFTNATAFSPTDTLPLSQRAKLLMMAEAMISLLTIALVAARAVNILA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26024; Mature: 26024
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHQHAVIHHRAFDFWLARAAVLVIICLQLLVINDLSFGPRWLAPALEAALLVPLSVATA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH WTQVASQKAVEEEHWYLVGRFRVVIRRTALAMTGVVSVMNCGSLVFLVRALLAGHAGSSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC QTLLIDALNIWVTNVIVFALWFWSTDRGGPPTCGLVNRAHSDFLFPQMTLNDREIRDWLP CEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHH GFVDYFFLAFTNATAFSPTDTLPLSQRAKLLMMAEAMISLLTIALVAARAVNILA HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRHQHAVIHHRAFDFWLARAAVLVIICLQLLVINDLSFGPRWLAPALEAALLVPLSVATA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH WTQVASQKAVEEEHWYLVGRFRVVIRRTALAMTGVVSVMNCGSLVFLVRALLAGHAGSSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC QTLLIDALNIWVTNVIVFALWFWSTDRGGPPTCGLVNRAHSDFLFPQMTLNDREIRDWLP CEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHH GFVDYFFLAFTNATAFSPTDTLPLSQRAKLLMMAEAMISLLTIALVAARAVNILA HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA