| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471641
Identifier: 13471641
GI number: 13471641
Start: 1401824
End: 1402099
Strand: Reverse
Name: 13471641
Synonym: mll1671
Alternate gene names: NA
Gene position: 1402099-1401824 (Counterclockwise)
Preceding gene: 13471644
Following gene: 13471640
Centisome position: 19.93
GC content: 60.51
Gene sequence:
>276_bases ATGCCCCAGCATCGCCACACGACAACGCCACCACCGAAGGAGGCGAAACTGTTCCGAAACAACCGCAGCCAGGCGGTGCG CATTCCTGTCGAGTTCGAACTCCCCGGCGACAAGGTTCTGATCAGCCGCGAAGGCGACCGCCTTGTCATTGAGCCGCTCC GCAAACCTGGGCTTGCCGCGCTGCTCGCCCAATGGGCGAAAGAGGCGCCGCTTGGTCCTGAGGACAACTTTCCAGAGATC AATGATGCGCCTGTCGAAGCCGAGGACATTTTTTGA
Upstream 100 bases:
>100_bases CCTTAGAATTCTGTTCCAGACTTCGGCCTGCCTTTTTTCTGTTGCTTGCCCAGGACTGTCATTTGGCATATACATATGGC ATATACAAATGGAGGCAAGC
Downstream 100 bases:
>100_bases TGCGGTTCATGCTGGATACCAACATCATCAGCGACATGATCCGGAACCCGGCCGGCAAGGCAGCCGGTGCAATGGTGCGC GAGGGAGACGCCGCTGTATG
Product: NtrP protein
Products: NA
Alternate protein names: Nitrogen Regulatory Protein; SpoVT/AbrB Domain Protein; Nitrogen Regulatory Protein NtrP; SpoVT/AbrB-Like; Virulence-Associated Protein VapB-Like Protein; NtrP Protein; SpoVT/AbrB-Like Protein; Virulence-Associated Protein
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MPQHRHTTTPPPKEAKLFRNNRSQAVRIPVEFELPGDKVLISREGDRLVIEPLRKPGLAALLAQWAKEAPLGPEDNFPEI NDAPVEAEDIF
Sequences:
>Translated_91_residues MPQHRHTTTPPPKEAKLFRNNRSQAVRIPVEFELPGDKVLISREGDRLVIEPLRKPGLAALLAQWAKEAPLGPEDNFPEI NDAPVEAEDIF >Mature_90_residues PQHRHTTTPPPKEAKLFRNNRSQAVRIPVEFELPGDKVLISREGDRLVIEPLRKPGLAALLAQWAKEAPLGPEDNFPEIN DAPVEAEDIF
Specific function: Unknown
COG id: COG4456
COG function: function code S; Virulence-associated protein and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10231; Mature: 10100
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQHRHTTTPPPKEAKLFRNNRSQAVRIPVEFELPGDKVLISREGDRLVIEPLRKPGLAA CCCCCCCCCCCCCCHHHHCCCCCCEEEEEEEEECCCCEEEEECCCCEEEECCCCCCCHHH LLAQWAKEAPLGPEDNFPEINDAPVEAEDIF HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PQHRHTTTPPPKEAKLFRNNRSQAVRIPVEFELPGDKVLISREGDRLVIEPLRKPGLAA CCCCCCCCCCCCCHHHHCCCCCCEEEEEEEEECCCCEEEEECCCCEEEECCCCCCCHHH LLAQWAKEAPLGPEDNFPEINDAPVEAEDIF HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA