| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is gntK [H]
Identifier: 13471644
GI number: 13471644
Start: 1404092
End: 1404574
Strand: Reverse
Name: gntK [H]
Synonym: mll1676
Alternate gene names: 13471644
Gene position: 1404574-1404092 (Counterclockwise)
Preceding gene: 13471645
Following gene: 13471641
Centisome position: 19.96
GC content: 68.32
Gene sequence:
>483_bases ATGGGCGTCGCCGGTTGCGGCAAGTCGGCTGTCGGCATCGCGCTGGCGGCCGCGCTGGATGCCGTCTTCATCGAAGGCGA CAGGCTGCATCCGCCGGAGAATGTGGCGCGCATGGCAAGCGGCGAGCCGCTCACCGACCAGTTGCGTGAAGGCTGGCTCG ACGCCATCGGCGAGCGCATCGCGACGTCGATCGGCGAAGGGCAGGGCGTGGTCGCGGCCTGCTCGGCGCTCAAGCGCAGC CATCGCGAACGCCTGCGCGGTTTTTGCCCCGATATCGTCTTCCTCTATCTGGAGATCGACCCGACGACCGCAAGGCGGCG GGTCGCCAGCCGCAAGGGCCATTTCATGCCGGCAAGCCTGGTCGACAGCCAGTTCGCCATTCTCGAGCCGCCGGGCAGCG ATGAGCGGGCGCTGACAATCGACGCGACGCGTCCCGTCGCCGATGCCGTTGCCGACGCGATGCGCCTGCTGGCCAATTCA TGA
Upstream 100 bases:
>100_bases ACCGCTTCACACTTTTCGGCATCATGCTCTAGCCGTGGACGGAGAAGCAGCGCAGGCGCCGGCGGGCGCTCCCCGCTTGA TGCCTCTGGCCATCGTGGTG
Downstream 100 bases:
>100_bases GCCGGTATCGCCGCCTGTCATTGGCGTCGCCCTGGGCGATCAGGGAATCTTACGATGACAAACGCCGCTCCCCAGCCGTC GATCTAAATCTGCGAGGACA
Product: gluconokinase
Products: NA
Alternate protein names: Gluconate kinase 2 [H]
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MGVAGCGKSAVGIALAAALDAVFIEGDRLHPPENVARMASGEPLTDQLREGWLDAIGERIATSIGEGQGVVAACSALKRS HRERLRGFCPDIVFLYLEIDPTTARRRVASRKGHFMPASLVDSQFAILEPPGSDERALTIDATRPVADAVADAMRLLANS
Sequences:
>Translated_160_residues MGVAGCGKSAVGIALAAALDAVFIEGDRLHPPENVARMASGEPLTDQLREGWLDAIGERIATSIGEGQGVVAACSALKRS HRERLRGFCPDIVFLYLEIDPTTARRRVASRKGHFMPASLVDSQFAILEPPGSDERALTIDATRPVADAVADAMRLLANS >Mature_159_residues GVAGCGKSAVGIALAAALDAVFIEGDRLHPPENVARMASGEPLTDQLREGWLDAIGERIATSIGEGQGVVAACSALKRSH RERLRGFCPDIVFLYLEIDPTTARRRVASRKGHFMPASLVDSQFAILEPPGSDERALTIDATRPVADAVADAMRLLANS
Specific function: Gluconate utilization system GNT-I. [C]
COG id: COG3265
COG function: function code G; Gluconate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gluconokinase gntK/gntV family [H]
Homologues:
Organism=Homo sapiens, GI299758445, Length=176, Percent_Identity=36.9318181818182, Blast_Score=104, Evalue=4e-23, Organism=Escherichia coli, GI87082265, Length=158, Percent_Identity=39.2405063291139, Blast_Score=123, Evalue=6e-30, Organism=Escherichia coli, GI1790719, Length=151, Percent_Identity=39.0728476821192, Blast_Score=117, Evalue=4e-28, Organism=Caenorhabditis elegans, GI25146487, Length=160, Percent_Identity=44.375, Blast_Score=127, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6320454, Length=140, Percent_Identity=40, Blast_Score=99, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR006001 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.12 [H]
Molecular weight: Translated: 16980; Mature: 16848
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVAGCGKSAVGIALAAALDAVFIEGDRLHPPENVARMASGEPLTDQLREGWLDAIGERI CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH ATSIGEGQGVVAACSALKRSHRERLRGFCPDIVFLYLEIDPTTARRRVASRKGHFMPASL HHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCHHH VDSQFAILEPPGSDERALTIDATRPVADAVADAMRLLANS HCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHCC >Mature Secondary Structure GVAGCGKSAVGIALAAALDAVFIEGDRLHPPENVARMASGEPLTDQLREGWLDAIGERI CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH ATSIGEGQGVVAACSALKRSHRERLRGFCPDIVFLYLEIDPTTARRRVASRKGHFMPASL HHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCHHH VDSQFAILEPPGSDERALTIDATRPVADAVADAMRLLANS HCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9135111; 9278503; 8655507; 11468405 [H]