| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471592
Identifier: 13471592
GI number: 13471592
Start: 1340219
End: 1341268
Strand: Direct
Name: 13471592
Synonym: mlr1610
Alternate gene names: NA
Gene position: 1340219-1341268 (Clockwise)
Preceding gene: 13471591
Following gene: 13471594
Centisome position: 19.05
GC content: 64.76
Gene sequence:
>1050_bases GTGTCCTTACTGGAACCCGATCGCGTCGACGGTGCCTATCGGGCAACCGGCCTTGTTGGTCGGCACCGAGGCGAGCAGCA GGTCCTTGAGCGAAGCGTTCGGGCCGATCGGGCCGGCAAGGCCGAGCGTGAGTTCGCCGATCAGCCGCCGGCCGTTCGAC GGATCGATGACGCAGGACACCCGCACGCGATCCCCTGCCCCGGCGCCGAAGGCGGTGTCGAAGGCGCCACGGATCTGGTC CGCGGTCAGCTTGCCGCCAATGGTCTTGGCGAAGAGATCGCGGACCGGCGAGGCGTTGACCTGTCGCATCAGGCCGAGCG CATCGGAGAAGTATTCCTGCTGGCTCTTGCCGTAGCAGGTGCCGTGCTTGATCCATTCATGCCGTTCCAACTGGGAGGCC GTGCCCGGCATCACCTGATCAAGCTCCTTGCGGGTACCGGCGTCCAGATTGACCGGCGGCAGGTCCTTCCAGTGAGCCGG ATTGTCGTTGGCCTTGTCGCTTGCCGCCACCTGGCAATAGAAATTGCCGTTCGGCTGCGGCCACAAGCCATGCAAGGTGA AGTTGGTGGCGTCGAACTCGCTCGGGTTCTGCGCCCTGCATTCGGTCTTGCTCGACTTGGTCTCGCAAAAAGCCGGCTGC CAGCTCAGCGCGAAGACATATTCGGGTTTTCCCGAGGCGGCAGGCTTGCCTTGTCCGCCAGGTGCCGCCGGCACCGTCGC CGCACTGCTGCCCGAGAGATGGCCGCAAGTGACCTTCACCCAGCGGCGCTCCGGATCGGCGCGGGGCACCAGGATCAGAT AATGCGTCGGCGCGTCCTTGTTGCCGGCAAGCAGCTGGTAGCTCTGCCCGGCCTCGGTCGAGACATTGCCTGGGTTCTTG CCGTTCTTGATGGCCTGCGTTGCCGGACAGGCAGCGTCGGCCACGAAGGTGCCGCTCATCTTGACCTCGGCACGCGCAGC ATTGGCCAGCGACACCGCCAGCATGGCCAATCCGAAAACGACACCAATGCGCATGAGAAATCCCCGGCTGAGAAGTGGGC GACAGACTGA
Upstream 100 bases:
>100_bases CGGCGAGCCGGCCGGCCATGAGCCGGACGCCGCCATCGCCTGGACCAGGTCGGCGCAGTTCTGATCTAGGATTTTCTCTG TCGCGCAATGCCGGTCAGCA
Downstream 100 bases:
>100_bases AGCTGTCTCCATGTCAGAATTGCGTTATTTTGCGGGTCGAACGCAAGAAACATCGTCGCGCAAAAGCAATTGCTGTGGAT TGACGCAAAACCGGCGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MSLLEPDRVDGAYRATGLVGRHRGEQQVLERSVRADRAGKAEREFADQPPAVRRIDDAGHPHAIPCPGAEGGVEGATDLV RGQLAANGLGEEIADRRGVDLSHQAERIGEVFLLALAVAGAVLDPFMPFQLGGRARHHLIKLLAGTGVQIDRRQVLPVSR IVVGLVACRHLAIEIAVRLRPQAMQGEVGGVELARVLRPAFGLARLGLAKSRLPAQREDIFGFSRGGRLALSARCRRHRR RTAAREMAASDLHPAALRIGAGHQDQIMRRRVLVAGKQLVALPGLGRDIAWVLAVLDGLRCRTGSVGHEGAAHLDLGTRS IGQRHRQHGQSENDTNAHEKSPAEKWATD
Sequences:
>Translated_349_residues MSLLEPDRVDGAYRATGLVGRHRGEQQVLERSVRADRAGKAEREFADQPPAVRRIDDAGHPHAIPCPGAEGGVEGATDLV RGQLAANGLGEEIADRRGVDLSHQAERIGEVFLLALAVAGAVLDPFMPFQLGGRARHHLIKLLAGTGVQIDRRQVLPVSR IVVGLVACRHLAIEIAVRLRPQAMQGEVGGVELARVLRPAFGLARLGLAKSRLPAQREDIFGFSRGGRLALSARCRRHRR RTAAREMAASDLHPAALRIGAGHQDQIMRRRVLVAGKQLVALPGLGRDIAWVLAVLDGLRCRTGSVGHEGAAHLDLGTRS IGQRHRQHGQSENDTNAHEKSPAEKWATD >Mature_348_residues SLLEPDRVDGAYRATGLVGRHRGEQQVLERSVRADRAGKAEREFADQPPAVRRIDDAGHPHAIPCPGAEGGVEGATDLVR GQLAANGLGEEIADRRGVDLSHQAERIGEVFLLALAVAGAVLDPFMPFQLGGRARHHLIKLLAGTGVQIDRRQVLPVSRI VVGLVACRHLAIEIAVRLRPQAMQGEVGGVELARVLRPAFGLARLGLAKSRLPAQREDIFGFSRGGRLALSARCRRHRRR TAAREMAASDLHPAALRIGAGHQDQIMRRRVLVAGKQLVALPGLGRDIAWVLAVLDGLRCRTGSVGHEGAAHLDLGTRSI GQRHRQHGQSENDTNAHEKSPAEKWATD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37689; Mature: 37558
Theoretical pI: Translated: 11.27; Mature: 11.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLEPDRVDGAYRATGLVGRHRGEQQVLERSVRADRAGKAEREFADQPPAVRRIDDAGH CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHCCCCCC PHAIPCPGAEGGVEGATDLVRGQLAANGLGEEIADRRGVDLSHQAERIGEVFLLALAVAG CCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AVLDPFMPFQLGGRARHHLIKLLAGTGVQIDRRQVLPVSRIVVGLVACRHLAIEIAVRLR HHHCCCCCHHCCCHHHHHHHHHHHCCCCEECHHHCCHHHHHHHHHHHHHHHHHHHHHHCC PQAMQGEVGGVELARVLRPAFGLARLGLAKSRLPAQREDIFGFSRGGRLALSARCRRHRR CHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEHHHHHHHHHH RTAAREMAASDLHPAALRIGAGHQDQIMRRRVLVAGKQLVALPGLGRDIAWVLAVLDGLR HHHHHHHHHHCCCHHHHEECCCCHHHHHHHHHHHHCCHHEECCCCCHHHHHHHHHHHCCC CRTGSVGHEGAAHLDLGTRSIGQRHRQHGQSENDTNAHEKSPAEKWATD CCCCCCCCCCCCEECCCHHHHHHHHHHCCCCCCCCCCHHCCCHHHCCCC >Mature Secondary Structure SLLEPDRVDGAYRATGLVGRHRGEQQVLERSVRADRAGKAEREFADQPPAVRRIDDAGH CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHCCCCCC PHAIPCPGAEGGVEGATDLVRGQLAANGLGEEIADRRGVDLSHQAERIGEVFLLALAVAG CCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AVLDPFMPFQLGGRARHHLIKLLAGTGVQIDRRQVLPVSRIVVGLVACRHLAIEIAVRLR HHHCCCCCHHCCCHHHHHHHHHHHCCCCEECHHHCCHHHHHHHHHHHHHHHHHHHHHHCC PQAMQGEVGGVELARVLRPAFGLARLGLAKSRLPAQREDIFGFSRGGRLALSARCRRHRR CHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEHHHHHHHHHH RTAAREMAASDLHPAALRIGAGHQDQIMRRRVLVAGKQLVALPGLGRDIAWVLAVLDGLR HHHHHHHHHHCCCHHHHEECCCCHHHHHHHHHHHHCCHHEECCCCCHHHHHHHHHHHCCC CRTGSVGHEGAAHLDLGTRSIGQRHRQHGQSENDTNAHEKSPAEKWATD CCCCCCCCCCCCEECCCHHHHHHHHHHCCCCCCCCCCHHCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA